BAC Information

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BAC

Clone NameB6Ng01-298K03
Chromosome12 (Build37)
Map Location 101,592,882 - 101,593,902
singlet/doubletsinglet
Overlap geneTtc7b
Upstream geneChes1, LOC100039892, 2610021K21Rik, Tdp1, LOC100040041, Kcnk13, Psmc1, BC002230, Calm1
Downstream geneRps6ka5, LOC100040123, 9030617O03Rik, EG667148, Gpr68, 0610010D24Rik, LOC100040184, Smek1, 4930463M05Rik, Mylf-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298K03.bB6Ng01-298K03.g
ACCGA093690GA093691
length1,1921,025
definitionB6Ng01-298K03.b B6Ng01-298K03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgccaatttctgagtatatctatcccaattatacattctggaac
tggggaaatcaccacaggatgtgtccggggacctactggacctactgtga
gtcggacatcagtcaaaactccattaattacctgccctccataagcccct
actttaactggagggccacaatgtttcttgggatcccctgggatcagtgt
caactcagaaccagtatccagcagaccccgaaaagtctgattatttcctt
ttccccagtgtacagttacccttgtaaaaggccgtaggtccctctgggga
agaactggagaaagggtaacagcaaaacctttgagtgtcttatcaagatc
cttcctcagaggaacctggccaccccttcattcaaggggttccggatctg
caaactgtctcaagtctggaaattgattcactggccgagattgctgttta
ccacgatctaatgtagcctttctttcatttgtttgagaatttttctgctt
atacagatcaaacaaatatgcagtaggcttcctatgtatttcattcctgg
aaacaccatgattgattagccagtaccaaaggtccaagcgagtcatgcca
ttataaatttcacctctcctgtgctgaccattactgggtatgttattata
aacattcttttgtctacgctgtccattataataactagaatcaccttgtc
tccggcgattcaatgctgccacctggcccttgttacctcggaatccaact
aaacccagtgaatttaattcatctaattgagcagaagcatctccaatgct
aagatctggcacaaggaaaagggaaagaacaaagcccttcaaatgtgctg
gtgcccctctcaccaatttgcgtcttatagagctggtgaaaggcatatct
tctggaccttcccattgtggacattatgctttacacatatatccactcta
gcattgcattttccctagtcttaaaatccctttcatcacactagccacgg
aatatcaggcatctccaagtcattccagtagccattctttttgataaaac
accctccagcaccatttcaacaactttgaaccctttttaactatgcgagg
cttccgtatttaactagatctcctacctcaagaccaatgtcatgactcag
cctggctagcttaaggtcccttccaccctttattccaaaaac
gaattcccttcttattaggatgtgacctgatagcaacacagatcccttaa
gtattactgtaggaagctcatttggactatgccactagccagtttctaaa
aagatgctaagactcgccattggggctgggaggagaggggaatgaaagac
acccatgacttggaggcttcgtcagccccagggaagcatgaagtcccagc
attctatcttgtggagaacagggcacgggagagtgacagagtctatgtca
gagtcacgcacatgagagaaggctctgatttgcagatacccatgagaaca
tgaaacaaagcaggcaccactggcctcttacctgggattggtaaggttgt
agcaggatttccatatctgtagcatgtgcttacaggtgagcagcgcctca
tccgggccccggcagagtgactccaacttcactttggaaaacagtagtct
acagtgggaaacaagggagaaagcacacagctcagcccagaggccgcctt
gcaaactacataagaggctcagtctgcggcagggggcaattgcgctcatt
ttattttaattttcattgtaaattgatttttctatacactatatcctgac
cacagtttccctccctcagctcctcccaggtccgtcccacctatccaaat
ccactctctttctttctctcaatctcattagaaaacaacaacaaacaggc
atctaaagaattaataataaaacaaaatccagcaaaccagaataggacag
aacaaacaaacaaacaaataggaaaaaagactgaaagaaaagtacaagaa
aaacatacaaatgcagagacacacagaattgcacacacagaaataccatt
aacaacacaaaattcaaaacaataatatataagcaaaacatatgttaaga
taagaaaaatgcctagacaaagaaattatgaaaaaaaaatcttcgaaaaa
tacaaattgagctcattttgtgctggccatctactgctggggtacggggc
ctgcccttaagtggtggtctgcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_101592882_101593902
seq2: B6Ng01-298K03.g_67_1091

seq1  GAATTCCCTTCTTATTAGGATGTGACCTGATAGCAACACAGATCCCTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTCTTATTAGGATGTGACCTGATAGCAACACAGATCCCTTAA  50

seq1  GTATTACTGTAGGAAGCTCATTTGGACTATGCCACTAGCCAGTTTCTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTACTGTAGGAAGCTCATTTGGACTATGCCACTAGCCAGTTTCTAAA  100

seq1  AAGATGCTAAGACTCGCCATTGGGGCTGGGAGGAGAGGGGAATGAAAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCTAAGACTCGCCATTGGGGCTGGGAGGAGAGGGGAATGAAAGAC  150

seq1  ACCCATGACTTGGAGGCTTCGTCAGCCCCAGGGAAGCATGAAGTCCCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATGACTTGGAGGCTTCGTCAGCCCCAGGGAAGCATGAAGTCCCAGC  200

seq1  ATTCTATCTTGTGGAGAACAGGGCACGGGAGAGTGACAGAGTCTATGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTATCTTGTGGAGAACAGGGCACGGGAGAGTGACAGAGTCTATGTCA  250

seq1  GAGTCACGCACATGAGAGAAGGCTCTGATTTGCAGATACCCATGAGAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCACGCACATGAGAGAAGGCTCTGATTTGCAGATACCCATGAGAACA  300

seq1  TGAAACAAAGCAGGCACCACTGGCCTCTTACCTGGGATTGGTAAGGTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACAAAGCAGGCACCACTGGCCTCTTACCTGGGATTGGTAAGGTTGT  350

seq1  AGCAGGATTTCCATATCTGTAGCATGTGCTTACAGGTGAGCAGCGCCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGATTTCCATATCTGTAGCATGTGCTTACAGGTGAGCAGCGCCTCA  400

seq1  TCCGGGCCCCGGCAGAGTGACTCCAACTTCACTTTGGAAAACAGTAGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGGCCCCGGCAGAGTGACTCCAACTTCACTTTGGAAAACAGTAGTCT  450

seq1  ACAGTGGGAAACAAGGGAGAAAGCACACAGCTCAGCCCAGAGGCCGCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGGAAACAAGGGAGAAAGCACACAGCTCAGCCCAGAGGCCGCCTT  500

seq1  GCAAACTACATAAGAGGCTCAGTCTGCGGCAGGGGGCAATTGCGCTCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACTACATAAGAGGCTCAGTCTGCGGCAGGGGGCAATTGCGCTCATT  550

seq1  TTATTTTAATTTTCATTGTAAATTGATTTTTCTATACACTATATCCTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTAATTTTCATTGTAAATTGATTTTTCTATACACTATATCCTGAC  600

seq1  CACAGTTTCCCTCCCTCAGCTCCTCCCAGGTCCGTCCCACCTATCCAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTTCCCTCCCTCAGCTCCTCCCAGGTCCGTCCCACCTATCCAAAT  650

seq1  CCACTCTCTTTCTTTCTCTCAATCTCATTAGAAAACAACAACAAACAGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCTCTTTCTTTCTCTCAATCTCATTAGAAAACAACAACAAACAGGC  700

seq1  ATCTAAAGAATTAATAATAAAACAAAATCCAGCAAACCAGAATAGGACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAGAATTAATAATAAAACAAAATCCAGCAAACCAGAATAGGACAG  750

seq1  AACAAACAAACAAACAAATAGGAAAAAAGACTGAAAGAAAAGTACAAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAAACAAACAAATAGGAAAAAAGACTGAAAGAAAAGTACAAGAA  800

seq1  AAACATACAAATGCAGAGACACACAGAATTGCACACACAGAAATACCATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATACAAATGCAGAGACACACAGAATTGCACACACAGAAATACCATT  850

seq1  AACAACACAAAATTCAAAACAATAATATATAAGCAAAACATATGTTAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACACAAAATTCAAAACAATAATATATAAGCAAAACATATGTTAAGA  900

seq1  TAAGAAAAATGCCTAGACAAAG-AATTATGAAAAAAAAATCTTCGAAAAA  949
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TAAGAAAAATGCCTAGACAAAGAAATTATGAAAAAAAAATCTTCGAAAAA  950

seq1  TAC-AATTGAGCTCATTTTGTGCTGGCCATCTACTGCT-GGGTACGGGGC  997
      ||| |||||||||||||||||||||||||||||||||| |||||||||||
seq2  TACAAATTGAGCTCATTTTGTGCTGGCCATCTACTGCTGGGGTACGGGGC  1000

seq1  CTGCCCTTAAGT-GTGGTCTGCATA  1021
      |||||||||||| ||||||||||||
seq2  CTGCCCTTAAGTGGTGGTCTGCATA  1025