BAC Information

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BAC

Clone NameB6Ng01-298O04
Chromosome12 (Build37)
Map Location 36,994,185 - 36,995,291
singlet/doubletsinglet
Overlap genenone
Upstream geneAhr, LOC100043575, LOC629758, LOC100043579, LOC669866, Agr3, Agr2, Tspan13, EG432649, Bzw2, Ankmy2, 1700108M19Rik
Downstream geneSostdc1, 4930579E17Rik, LOC638858, Meox2, A530016O06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298O04.bB6Ng01-298O04.g
ACCGA093878GA093879
length7141,113
definitionB6Ng01-298O04.b B6Ng01-298O04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaacagagaaatcttgaatggcctagaagcacttaaagaaatg
ttcaacatcctcagtcatcaggcaaatgcaaattaaaacaacactgagat
tccatccaaccatcagaatggctaagatcaaaaactcaaaagtcaacaca
cactagagaggatacggagcaaggggaacactcctccactgctggtggga
gtgcaaccttgtacaacccctctggaaatcaatctgtaagtttctcaaaa
attggaaatagttctcactgaagatacagctataaagctcctgggcatac
acccaaaagatgctctatcataccacaagtacacgtgctcctctatgttc
atagcagctttattccttatagccaaaaaccggaaacaacacagataccc
ctcagccaaagaacggataaagaaaatataatttatttataattgaatac
tcattcagctattataaacaaggacatcatgaattttgcaggcaaatgaa
tagaactagaaaatatcatcctgaatggaataacccagacccaaaaggac
atgaatagtgtgtacttacgtatagtagatattagggtactcactctata
ctccacagacccaaaaaagctaaacaacaatgaaggcccaagcgaggatg
cttgaacctcacttagaatggggaataaaattgtcataggaggaagatgg
ggggaggggaagtg
gaattccaaatgaaagatggaagcaggcacccagcagactggggctacct
ttctttctttctttccatttaatgttcttcaaagccatgcctacctttgg
tttgctcaccatctgacccctttgagcctttccccctgggtcccatgagt
gtcatgactatttcccctttcacgtccatgcattactctgctccctcgag
ggccccatcttgtcagtagcgtgcattctttcctcttcaacttcttctcc
actcaggagtctttgtctctgctctgtgtctacattgggagatttttcca
agcgtgtgacattatttctctgttacttctaattagactccctgaaaaac
ctgtagctatggccggatttcaccgggacttcttatagtgacttacccag
ggactttttgtttagtgaatccaagaaatgagtcaccagagccctccaag
gttagagaaagcttctacttgtctcaggaggtgggaagggtgggggaagc
tacctaagcccgaagtctgcacattccagtggaaagtttcattatttccc
ctccttcgtattcttgctttggctgccctagaccagctccttgttctacc
tgcttgggtagacagcagactgaaccaagaatctgtctgggcatgagatc
tgtgacgcctcattgtctatgacttgtcagggggggaaaacagcatggct
atatctagtggagtttgatggtgacacgcatgtttgttttgcttatattt
ctagtcttttgttgcctcaagacccttggctcctctgttttggttgccaa
tctcccaaccccagttaaatggagatgatcattttaatgttagggactgg
gtgggaaggagaaaataaccccttcccccatctctgcctatgggaaagac
tttgaaaatggttggccctatgttaagccataatatattttaatgtaagg
caaagtctgccttcttctttaacaatttttgattattaccttttcatgag
caatatacatgttcatgagcaatacctgattaggaagcaactagagaagt
caactatttacctgtcgcttggttcaagggtctatcagtctgccaaaggt
gggaaaagggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_36994185_36995291
seq2: B6Ng01-298O04.g_66_1178

seq1  GAATTCCAAATGAAAGATGGAAGCAGGCACCCAGCAGACTGGGGCTACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAATGAAAGATGGAAGCAGGCACCCAGCAGACTGGGGCTACCT  50

seq1  TTCTTTCTTTCTTTCCATTTAATGTTCTTCAAAGCCATGCCTACCTTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCCATTTAATGTTCTTCAAAGCCATGCCTACCTTTGG  100

seq1  TTTGCTCACCATCTGACCCCTTTGAGCCTTTCCCCCTGGGTCCCATGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTCACCATCTGACCCCTTTGAGCCTTTCCCCCTGGGTCCCATGAGT  150

seq1  GTCATGACTATTTCCCCTTTCACGTCCATGCATTACTCTGCTCCCTCGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGACTATTTCCCCTTTCACGTCCATGCATTACTCTGCTCCCTCGAG  200

seq1  GGCCCCATCTTGTCAGTAGCGTGCATTCTTTCCTCTTCAACTTCTTCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCATCTTGTCAGTAGCGTGCATTCTTTCCTCTTCAACTTCTTCTCC  250

seq1  ACTCAGGAGTCTTTGTCTCTGCTCTGTGTCTACATTGGGAGATTTTTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGAGTCTTTGTCTCTGCTCTGTGTCTACATTGGGAGATTTTTCCA  300

seq1  AGCGTGTGACATTATTTCTCTGTTACTTCTAATTAGACTCCCTGAAAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTGTGACATTATTTCTCTGTTACTTCTAATTAGACTCCCTGAAAAAC  350

seq1  CTGTAGCTATGGCCGGATTTCACCGGGACTTCTTATAGTGACTTACCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGCTATGGCCGGATTTCACCGGGACTTCTTATAGTGACTTACCCAG  400

seq1  GGACTTTTTGTTTAGTGAATCCAAGAAATGAGTCACCAGAGCCCTCCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTTTTGTTTAGTGAATCCAAGAAATGAGTCACCAGAGCCCTCCAAG  450

seq1  GTTAGAGAAAGCTTCTACTTGTCTCAGGAGGTGGGAAGGGTGGGGGAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAGAAAGCTTCTACTTGTCTCAGGAGGTGGGAAGGGTGGGGGAAGC  500

seq1  TACCTAAGCCCGAAGTCTGCACATTCCAGTGGAAAGTTTCATTATTTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAAGCCCGAAGTCTGCACATTCCAGTGGAAAGTTTCATTATTTCCC  550

seq1  CTCCTTCGTATTCTTGCTTTGGCTGCCCTAGACCAGCTCCTTGTTCTACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCGTATTCTTGCTTTGGCTGCCCTAGACCAGCTCCTTGTTCTACC  600

seq1  TGCTTGGGTAGACAGCAGACTGAACCAAGAATCTGTCTGGGCATGAGATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGGGTAGACAGCAGACTGAACCAAGAATCTGTCTGGGCATGAGATC  650

seq1  TGTGACGCCTCATTGTCTATGACTTGTCAGGGGGGGAAAACAGCATGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACGCCTCATTGTCTATGACTTGTCAGGGGGGGAAAACAGCATGGCT  700

seq1  ATATCTAGTGGAGTTTGATGGTGACACGCATGTTTGTTTTGCTTATATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTAGTGGAGTTTGATGGTGACACGCATGTTTGTTTTGCTTATATTT  750

seq1  CTAGTCTTTTGTTGCCTCAAGACCCTTGGCTCCTCTGTTTTGGTTGCCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCTTTTGTTGCCTCAAGACCCTTGGCTCCTCTGTTTTGGTTGCCAA  800

seq1  TCTCCCAACCCCAGTTAAATGGAGATGATCATTTTAATGTTAGGGACTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCAACCCCAGTTAAATGGAGATGATCATTTTAATGTTAGGGACTGG  850

seq1  GTGGGAAGGAGAAAATAACCCCTTCCCCCATCTCTGCCTATGGGAAAGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAAGGAGAAAATAACCCCTTCCCCCATCTCTGCCTATGGGAAAGAC  900

seq1  TTTGAAAATGGTTGGCACTATGTTAAGCCATAATATATTTTAATGTAAGG  950
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTTGAAAATGGTTGGCCCTATGTTAAGCCATAATATATTTTAATGTAAGG  950

seq1  CAAAGTCTGCCTCCTTCTTT-ACAATTTTTGAATATTA-CTTTTCATGAG  998
      |||||||||||| ||||||| ||||||||||| ||||| |||||||||||
seq2  CAAAGTCTGCCTTCTTCTTTAACAATTTTTGATTATTACCTTTTCATGAG  1000

seq1  CAATATTACATG-TCATGAGCAAATACCTGA-TAAGAAGCAACTAGAGGA  1046
      ||||| |||||| |||||||| ||||||||| || ||||||||||||| |
seq2  CAATA-TACATGTTCATGAGC-AATACCTGATTAGGAAGCAACTAGAGAA  1048

seq1  GGCAAACATTTA-CTGTGGCTTGGTTCAA-GGTCTA-CAGTCTGCC-AAG  1092
      | |||  ||||| |||| ||||||||||| |||||| ||||||||| |||
seq2  GTCAACTATTTACCTGTCGCTTGGTTCAAGGGTCTATCAGTCTGCCAAAG  1098

seq1  GTGGGAAAAGTGTGG  1107
      |||||||||| ||||
seq2  GTGGGAAAAGGGTGG  1113