BAC Information

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BAC

Clone NameB6Ng01-299C10
Chromosome12 (Build37)
Map Location 107,618,729 - 107,719,114
singlet/doubletdoublet
Overlap gene1700121N20Rik, LOC100041191
Upstream gene2810011L19Rik, LOC100040339, EG668081, D430019H16Rik, Bdkrb2, Bdkrb1, 2410024A21Rik, 4933433P14Rik, Ak7, Papola, Vrk1, LOC100040386, LOC100040404, LOC100040420
Downstream geneLOC100040451, LOC673604, LOC100040484, LOC382635, LOC100041251
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299C10.bB6Ng01-299C10.g
ACCGA094073GA094074
length4241,132
definitionB6Ng01-299C10.b B6Ng01-299C10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,618,729 - 107,619,164)(107,717,989 - 107,719,114)
sequence
tcttgtctctgtttccccagggtgtccaatgtttcacgtaggttcttaga
ataaattcaggtcctgttgctaaccaaactgtcttcacatctcccaagac
cggtctctcttatctccagaatattaacccctttgattcacacttaagtt
cttctggactatcccaagcccctcctggttttcttgcatctggatgtctt
ttttcgttcattcctggtacatactttgatcaggatatgtggagttgttc
tccagataattccagaatctgaatagaatgtttattgcctgatttgtact
ttctgggctctgaccccagcacagtgccagagatatagggagccttgggt
ctctctctctctctctctctctctctctctctctctctctctctctctct
ctctgtctctctctctctatctct
gaattcttgttctggtcctattgtttcatccggggaagctgggggtgagt
ttgatctatttctgagacatgtgtgttcaggacttgatatctgggtggct
cagaccttgagaaatattcacagccacactcctcaaaggtccagcgtcgc
accccacgagggccccagcccgggctcacagcctttgctggcaaggcagt
ttactgccagggcctcattgctatgctaatgcccagagcggcctcaattt
gcaattctcccctggaaatggtattcagaagtctgctaccctgttctagt
ctaggtgggggatgctggggatatttttcttgttcctcctcttcctggcc
aggcaggtaaaataaacttacttctggtgacagcagacacacatcacctc
cctgaggccttcttgggtctgcacaggaagacactgctcggcccttttca
gagtgggaggcaggggtgacaaggcccagttctgcttgcaaatcgttatc
cacaactactaatttctagtcttgtgtgcaaatggtggttcggtcccaat
gtctctccaaagcatcaggggaagggcttgctagagatcaccccttttct
ttccctatggaaaaataaaaatgtaaagtttaccccaggaacaaatgatt
aataaagtgtgttcagtctactccagctgttcaccataatagaagaatat
agttcgatgtttggggtcctgaagccattgatgacggcaattggcttttt
ttgaaaaaaaaaaaaattttttttttggaggggccaaaagggctgagtga
ttatagggttaatattcaaatcagaaatttgcaaggcctgcataatggga
gcgccaccctcataacaataggaatttttaacaatatccagccctttgtt
agcaagagagttacaagcaccgagggcaatcagtgtgtcttgtcagtttc
ttttatctaccatctccaaccgccgaggagccgaaatgaagcacttttgg
aattatcaatttcagccacattttgcatacaagcctcccgaagagaggca
tgattaaatgtaaagacccctctcggaaaagggaactgttctaggcgcgc
ccgaaggaatcttccggaacgactgcattctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_107618729_107619164
seq2: B6Ng01-299C10.b_46_475

seq1  GAATTCTCTTGTCTCTGTTTCCCCAGGGTGTCCAATGTTTCACGTAGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTGTCTCTGTTTCCCCAGGGTGTCCAATGTTTCACGTAGGTT  50

seq1  CTTAGAATAAATTCAGGTCCTGTTGCTAACCAAACTGTCTTCACATCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAATAAATTCAGGTCCTGTTGCTAACCAAACTGTCTTCACATCTCC  100

seq1  CAAGACCGGTCTCTCTTATCTCCAGAATATTAACCCCTTTGATTCACACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACCGGTCTCTCTTATCTCCAGAATATTAACCCCTTTGATTCACACT  150

seq1  TAAGTTCTTCTGGACTATCCCAAGCCCCTCCTGGTTTTCTTGCATCTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTCTTCTGGACTATCCCAAGCCCCTCCTGGTTTTCTTGCATCTGGA  200

seq1  TGTCTTTTTTCGTTCATTCCTGGTACATACTTTGATCAGGATATGTGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTTTTCGTTCATTCCTGGTACATACTTTGATCAGGATATGTGGAG  250

seq1  TTGTTCTCCAGATAATTCCAGAATCTGAATAGAATGTTTATTGCCTGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTCCAGATAATTCCAGAATCTGAATAGAATGTTTATTGCCTGATT  300

seq1  TGTACTTTCTGGGCTCTGACCCCAGCACAGTGCCAGAGATATAGGGAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTTTCTGGGCTCTGACCCCAGCACAGTGCCAGAGATATAGGGAGCC  350

seq1  TTGGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  400

seq1  CTCCCTCCCTCTCTCTCTCTCTCTTTCTCTCTCTCT  436
      ||| ||| || ||||||||||||| |||||      
seq2  CTCTCTCTCTGTCTCTCTCTCTCTATCTCT------  430

seq1: chr12_107717989_107719114
seq2: B6Ng01-299C10.g_68_1199 (reverse)

seq1  GAGAATGCAGTCGGTC--GGAGAATCTTTCGGGGCGCGGCT--GACAGTT  46
      ||||||||||||| ||  | ||| || ||| ||||||| ||   ||||||
seq2  GAGAATGCAGTCGTTCCGGAAGATTCCTTC-GGGCGCGCCTAGAACAGTT  49

seq1  -CCTTTTCCGAGAGGGGTCCTTTACATTT-ATCATGCCTCTTCCTCGGGG  94
       ||||||||||||||||| |||||||||| |||||||||| || ||||| 
seq2  CCCTTTTCCGAGAGGGGT-CTTTACATTTAATCATGCCTC-TCTTCGGGA  97

seq1  GCTTTGTTATGC-AAATGTGGCTGAAATTGATAATTCC-AAAGTGCTTCA  142
      |  ||| ||||| ||||||||||||||||||||||||| |||||||||||
seq2  GGCTTG-TATGCAAAATGTGGCTGAAATTGATAATTCCAAAAGTGCTTCA  146

seq1  TTTCGGCTCCTCGGCGGTTGGAGATGGTAGATAAAAAGAAACTGACAAGA  192
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTCGGCTCCTCGGCGGTTGGAGATGGTAGAT-AAAAGAAACTGACAAGA  195

seq1  CACACTGATTGCCCTCGGTGCTTGTAACTCTCTTGCTAAC-AAGGGCTGG  241
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CACACTGATTGCCCTCGGTGCTTGTAACTCTCTTGCTAACAAAGGGCTGG  245

seq1  ATATTGTTAAAAATTCCTATTGTTATGAGGGTGGCGCTCCCATTATGCAG  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTTAAAAATTCCTATTGTTATGAGGGTGGCGCTCCCATTATGCAG  295

seq1  GCCTTGCAAATTTCTGATTTGAATATTAACCCTTTAATCACTCAGCCCTT  341
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GCCTTGCAAATTTCTGATTTGAATATTAACCCTATAATCACTCAGCCCTT  345

seq1  TTGGCCCCTCCAAAAAAAAA--TTTTTTTTTTTTCAAAAAAAGCCAATTG  389
      ||||||||||||||||||||  ||||||||||||||||||||||||||||
seq2  TTGGCCCCTCCAAAAAAAAAATTTTTTTTTTTTTCAAAAAAAGCCAATTG  395

seq1  CCGTCATCAATGGCTTCAGGACCCCAAACATCGAACTATATTCTTCTATT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCATCAATGGCTTCAGGACCCCAAACATCGAACTATATTCTTCTATT  445

seq1  ATGGTGAACAGCTGGAGTAGACTGAACACACTTTATTAATCATTTGTTCC  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGAACAGCTGGAGTAGACTGAACACACTTTATTAATCATTTGTTCC  495

seq1  TGGGGTAAACTTTACATTTTTATTTTTCCATAGGGAAAGAAAAGGGGTGA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTAAACTTTACATTTTTATTTTTCCATAGGGAAAGAAAAGGGGTGA  545

seq1  TCTCTAGCAAGCCCTTCCCCTGATGCTTTGGAGAGACATTGGGACCGAAC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGCAAGCCCTTCCCCTGATGCTTTGGAGAGACATTGGGACCGAAC  595

seq1  CACCATTTGCACACAAGACTAGAAATTAGTAGTTGTGGATAACGATTTGC  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATTTGCACACAAGACTAGAAATTAGTAGTTGTGGATAACGATTTGC  645

seq1  AAGCAGAACTGGGCCTTGTCACCCCTGCCTCCCACTCTGAAAAGGGCCGA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAACTGGGCCTTGTCACCCCTGCCTCCCACTCTGAAAAGGGCCGA  695

seq1  GCAGTGTCTTCCTGTGCAGACCCAAGAAGGCCTCAGGGAGGTGATGTGTG  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGTCTTCCTGTGCAGACCCAAGAAGGCCTCAGGGAGGTGATGTGTG  745

seq1  TCTGCTGTCACCAGAAGTAAGTTTATTTTACCTGCCTGGCCAGGAAGAGG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGTCACCAGAAGTAAGTTTATTTTACCTGCCTGGCCAGGAAGAGG  795

seq1  AGGAACAAGAAAAATATCCCCAGCATCCCCCACCTAGACTAGAACAGGGT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACAAGAAAAATATCCCCAGCATCCCCCACCTAGACTAGAACAGGGT  845

seq1  AGCAGACTTCTGAATACCATTTCCAGGGGAGAATTGCAAATTGAGGCCGC  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGACTTCTGAATACCATTTCCAGGGGAGAATTGCAAATTGAGGCCGC  895

seq1  TCTGGGCATTAGCATAGCAATGAGGCCCTGGCAGTAAACTGCCTTGCCAG  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGCATTAGCATAGCAATGAGGCCCTGGCAGTAAACTGCCTTGCCAG  945

seq1  CAAAGGCTGTGAGCCCGGGCTGGGGCCCTCGTGGGGTGCGACGCTGGACC  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGCTGTGAGCCCGGGCTGGGGCCCTCGTGGGGTGCGACGCTGGACC  995

seq1  TTTGAGGAGTGTGGCTGTGAATATTTCTCAAGGTCTGAGCCACCCAGATA  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGAGTGTGGCTGTGAATATTTCTCAAGGTCTGAGCCACCCAGATA  1045

seq1  TCAAGTCCTGAACACACATGTCTCAGAAATAGATCAAACTCACCCCCAGC  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTCCTGAACACACATGTCTCAGAAATAGATCAAACTCACCCCCAGC  1095

seq1  TTCCCCGGATGAAACAATAGGACCAGAACAAGAATTC  1126
      |||||||||||||||||||||||||||||||||||||
seq2  TTCCCCGGATGAAACAATAGGACCAGAACAAGAATTC  1132