BAC Information

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BAC

Clone NameB6Ng01-303C03
Chromosome12 (Build37)
Map Location 93,740,747 - 93,741,859
singlet/doubletsinglet
Overlap genenone
Upstream geneTshr, Gtf2a1, Ston2, EG666955, LOC100039631, Sel1l, LOC100039367, EG432681, LOC667589, LOC100039387, LOC100039425, LOC628116
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303C03.bB6Ng01-303C03.g
ACCGA097008GA097009
length9871,104
definitionB6Ng01-303C03.b B6Ng01-303C03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgcttagctctgttacccattttttaaaatagggttatttta
ttttctggagtccatcttttgagttttttttttaattatgtattttcctc
aattacatttccaatgctatcccaaaagtcccccctccctcttctcccct
cccctacccacccattcccattttgtggccctggcattcccctatactgg
gactctctttccagtgatggccgactaggccatcttttgatacttatgca
gctagagtcaagagctccggggtactggttagttcataatgttgttgcac
ctacagggttgcagatctctttagctccttgggtactttctctagctcct
ccattgggggccctgtgatccatccaatagttgactgtgagcatccactt
ctgtgtttgctaggccccggcctagtctcacaagagacagctatatcacg
gtccttgcaacaaacgcttgctagtgtatgcaatggtgtcatcgtttgga
ggataattatgggatggatccccggatatggcagtctctagatggtccat
ccttttgtctcagctccaaactttgtctctgtaactcatattggatatta
gtcgcctatcagatttaggatttaggtaaagatcctttcccaatctgttg
gtggcctttttgtcttattgacagtgttttttgccttatagaagttttat
gaggtcccgtttgtcgattctcgatcttatagcacaagccattgctcttc
tgttcaggaatttccccctgtgcccatatcttcgaggcttttcccacttt
ctcctctataagtttcagaggctctagttttctgtggagttccttgatcc
aattgactttagctttgtacaaggagataagaatgggtcaattctcattc
ttctatgtgataaccaccagttgtgccagcactatttgttgagaatactg
tcttttttccactggatggttttagctcctttgttaa
gaattcccagttgaagaaattcaaatggctgagaaacacttaaatggtca
atgtccttagccattggggaaatacaaaaagatgtgaaccttgataaagc
tatcatttcacatcaatctttctttagactctgaaattttaataaatgga
tgtaataagattgacttttcttcctaattatggaaattattaaaggaaga
tgtaactgattttagcagatttgggtaacactcctgtattctccatctga
atttactctcagaccttcaaaatcaaggactctgaaaatcaagttcattg
tgggccaggagtgactgagtaaatagaatcagaggaactagctggacatg
agaacctgttcaatatacaattttctgaatctgaatatcagataactaat
ctgagccattttctctgaaattataatgtagaaactgtatcaatcagagt
gtagcattgaatgcagttaatagattataagagtcaattacaacaatcat
aaaaacataatcacatataaatacttagagggcattatcaccacttttat
accacagcatttcctctgggttttctgaaatagtagatgtcctatagcaa
aacacagcagcaagtctggcataccaagatatttcatgaaagctaataac
ctatgagaggcaaaccttaactaaatatatcaggaaagaactgtaattca
ttctaaaaacattttgtcctggaattcctatgatactatatggagtatca
tgcacattgaggtgtactctctctgataaaagcgatttagccaaaagaaa
gtaatacgacatgattttttccagtctgaacaaagagaagaatagtggct
tgacttttctttcagaagttaagaacaaaacagacaataatctatgaatt
ttcaagtgtgaactgttttgtttgtgttactttataacaattcaaaattt
ctataatttggtaaatagattttttttttaatttataactttccatccag
tttacaccatagatgatatttaaaaaaaagatgatagtgtgacttcaatt
actatattgatgactccagtgtgaaatatttggttacgcaggcataaaca
aagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_93740747_93741859
seq2: B6Ng01-303C03.g_64_1167 (reverse)

seq1  GCTTTGTTTATGCTGGCCGTTAACAAAATATTTCACACTGGAGTCATCCA  50
      |||||||||||||  ||   |||| |||||||||||||||||||||| ||
seq2  GCTTTGTTTATGCCTGC--GTAACCAAATATTTCACACTGGAGTCAT-CA  47

seq1  TTATAGTAAATTGAAGTCACACTAATCAATCTTTTTTTTAAATATCATCT  100
       |||||| ||||||||||||||| ||| ||||||||||||||||||||| 
seq2  ATATAGT-AATTGAAGTCACACT-ATC-ATCTTTTTTTTAAATATCATC-  93

seq1  TATGGTGTTAAACTGGAATTGGAAGTTATAAATT-AAAAAAAAATCTATT  149
      ||||||| |||||||| || | |||||||||||| |||||||||||||||
seq2  TATGGTG-TAAACTGG-ATGGAAAGTTATAAATTAAAAAAAAAATCTATT  141

seq1  TACCAAATTATAGAAATTTTGAATTGTTATAAAGTAAACACAAACAAAAC  199
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TACCAAATTATAGAAATTTTGAATTGTTATAAAGT-AACACAAACAAAAC  190

seq1  AGTTCACACTTGAAAATTCATAGATTATTGTCTGTTTTGTTCTTAACTTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCACACTTGAAAATTCATAGATTATTGTCTGTTTTGTTCTTAACTTC  240

seq1  TGAAAGAAAAGTCAAGCCACTATTCTTCTCTTTGTTCAGACTGGAAAAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAAAAGTCAAGCCACTATTCTTCTCTTTGTTCAGACTGGAAAAAA  290

seq1  TCATGTCGTATTACTTTCTTTTGGCTAAATCGCTTTTATCAGAGAGAGTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCGTATTACTTTCTTTTGGCTAAATCGCTTTTATCAGAGAGAGTA  340

seq1  CACCTCAATGTGCATGATACTCCATATAGTATCATAGGAATTCCAGGACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCAATGTGCATGATACTCCATATAGTATCATAGGAATTCCAGGACA  390

seq1  AAATGTTTTTAGAATGAATTACAGTTCTTTCCTGATATATTTAGTTAAGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTTTTAGAATGAATTACAGTTCTTTCCTGATATATTTAGTTAAGG  440

seq1  TTTGCCTCTCATAGGTTATTAGCTTTCATGAAATATCTTGGTATGCCAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTCTCATAGGTTATTAGCTTTCATGAAATATCTTGGTATGCCAGA  490

seq1  CTTGCTGCTGTGTTTTGCTATAGGACATCTACTATTTCAGAAAACCCAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGCTGTGTTTTGCTATAGGACATCTACTATTTCAGAAAACCCAGA  540

seq1  GGAAATGCTGTGGTATAAAAGTGGTGATAATGCCCTCTAAGTATTTATAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGCTGTGGTATAAAAGTGGTGATAATGCCCTCTAAGTATTTATAT  590

seq1  GTGATTATGTTTTTATGATTGTTGTAATTGACTCTTATAATCTATTAACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTATGTTTTTATGATTGTTGTAATTGACTCTTATAATCTATTAACT  640

seq1  GCATTCAATGCTACACTCTGATTGATACAGTTTCTACATTATAATTTCAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCAATGCTACACTCTGATTGATACAGTTTCTACATTATAATTTCAG  690

seq1  AGAAAATGGCTCAGATTAGTTATCTGATATTCAGATTCAGAAAATTGTAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGGCTCAGATTAGTTATCTGATATTCAGATTCAGAAAATTGTAT  740

seq1  ATTGAACAGGTTCTCATGTCCAGCTAGTTCCTCTGATTCTATTTACTCAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAACAGGTTCTCATGTCCAGCTAGTTCCTCTGATTCTATTTACTCAG  790

seq1  TCACTCCTGGCCCACAATGAACTTGATTTTCAGAGTCCTTGATTTTGAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCCTGGCCCACAATGAACTTGATTTTCAGAGTCCTTGATTTTGAAG  840

seq1  GTCTGAGAGTAAATTCAGATGGAGAATACAGGAGTGTTACCCAAATCTGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAGAGTAAATTCAGATGGAGAATACAGGAGTGTTACCCAAATCTGC  890

seq1  TAAAATCAGTTACATCTTCCTTTAATAATTTCCATAATTAGGAAGAAAAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCAGTTACATCTTCCTTTAATAATTTCCATAATTAGGAAGAAAAG  940

seq1  TCAATCTTATTACATCCATTTATTAAAATTTCAGAGTCTAAAGAAAGATT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCTTATTACATCCATTTATTAAAATTTCAGAGTCTAAAGAAAGATT  990

seq1  GATGTGAAATGATAGCTTTATCAAGGTTCACATCTTTTTGTATTTCCCCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGAAATGATAGCTTTATCAAGGTTCACATCTTTTTGTATTTCCCCA  1040

seq1  ATGGCTAAGGACATTGACCATTTAAGTGTTTCTCAGCCATTTGAATTTCT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTAAGGACATTGACCATTTAAGTGTTTCTCAGCCATTTGAATTTCT  1090

seq1  TCAACTGGGAATTC  1113
      ||||||||||||||
seq2  TCAACTGGGAATTC  1104