BAC Information

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BAC

Clone NameB6Ng01-303J19
Chromosome12 (Build37)
Map Location 22,990,314 - 23,128,938
singlet/doubletdoublet
Overlap gene2410018L13Rik, LOC77114
Upstream geneEG668645, EG668646, LOC100043416, LOC668650, EG668496, LOC668653, EG432637, LOC668656, EG629133, EG668660, EG668662, LOC668664
Downstream geneEG668669, EG668670, LOC668680, LOC100042895, LOC100043435, EG628081, LOC100042903, LOC100043440, EG668518
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303J19.bB6Ng01-303J19.g
ACCGA097371GA097372
length1,1241,081
definitionB6Ng01-303J19.b B6Ng01-303J19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,127,817 - 23,128,938)(22,990,314 - 22,991,398)
sequence
gaattccaattgagagggagatgtagggtgaaacagatcaacagtactga
gcacatatcccataatttgtaagaagaatcactaacgagaaaaatcatgg
acaagcagggtgtatttgttcatgtctttaatcccagagtcacgggcagg
tatacatcattgacctggatcttagtctgttctatgtaacacattccagg
acagcaaaggttacatattaagatccttactccactgcaaaaatcaacca
gggagacaaaaatgatagaaagaattcagttgtttactacagttccttca
aagaagtatacattccctgcacttctgtactcatctagcagaaacaggaa
gtgtaccgctttaaactgcaccattagtaaaactttactggcaatcaagg
cacatttaatggaccaatggacagatgaaaatattagtaatataagtgtt
gaacataaagagcaacataaggcaggagagagctataactcagctgtgga
aagctcttgctggtcttccagataacagtggtcaatactagcattcacgt
gacccatggctttatgaacaggagttctgagtccaccttcaaacaaaact
aacgatgaagcacacatgatattcatattcacgcatacaagcaaaacacc
cctatttatttaaaaatttcaaaacaaacacaagagtttggggaaatatc
aatacccagaatccaatgactctgaagcctcaggcagtattgatgtcatg
agcatatgccatcctaaaaaacagactacaacctatgtgcccacggggta
cacagggggccccaaccccactcaaaaaagaaacagaggagattgggagg
agggaatctgtgagggcagggacctagagtagggacagtgatcagggtga
taatgaatatctaaattataggataaacaaaaaaaaaagtaaagaaagaa
aaaggaaatttttgagtgtatatacactttcatcttaaccaagatgaatc
ttagaaaggctcctgcactgtcaatgtctaaagtctctgctgacactcag
acaatatcttgaacagctacatcaagaaagcaagtttgcaaaatcaaaca
gcaaggttattatccttccaacat
gaattcagggggttctgaggctaaaggtgggattggggagcaaaagggtg
ggctcccttccagccgggaagcagtatccccggttccactccacgccctc
tgggcaacgttgctagaggtcatggcgggtgccgggcaccgcagtccagg
acagggcgcgcccacgaacccaagcacgtccggaaggcagaggtaatgca
gcagaccacagccactgacaggccctgagcgctcatagccctccttgctg
aggcctccgcttcctggcggcgcggtagcggcgggcgacccgattggtgg
tcaggtctgcgccccgccccgccgggggtcctccgcgccctccccagccg
ggccctcccctttccgcgggaggcgtccaggacagtggcttggtggcgcg
cagttccccctgactgtgcgcgcccgcgtgtgggctcctttgcagaggac
tcggtagctgcagctcccggagcacagcggacagagctgcgggctgcgtg
cgcccctgctgccaccgggcctgccgcggtggctcccgcgccccgcggcg
acttccgctcccgcgcttctctttgttcaagtccccgagcggcggcgggg
tcggagcccgcgccttgggcgactgaggcggccgcagtccgcgccccggc
gccctggcgatgccggaccagatctctgtgtcggaattcgtggccgagac
ccttgaggactacaaggcgcccactgcctctagcttcacgcgcacggccc
agtgccggaacaccgcggcggccatcgaggaggtgagtggtagcttagcc
ggcgcccggcgggaggcttagggtcgcggggatcgcgctgcgccctgggc
acccgctaggcttccgcgcctggtgccggatacccagtggccctccgggc
tgcgcccacacccgggaaaaagtttctggtaccccaagcccggacgcagc
cagaacagcagtgcccgaccacagaagccctttgttccctgctctaggga
gagcctgcttggccaccttgggcctttttgcgacgctcctgtctggtaca
ttcttcgcagttttcagtccttgctcccatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_23127817_23128938
seq2: B6Ng01-303J19.b_45_1168 (reverse)

seq1  ATGTTGGAAAGAT-ATAA-CTTGCTGTTTGATTTTGCAACTTTGCTTTC-  47
      ||||||||| ||| |||| ||||||||||||||||||||  |||||||| 
seq2  ATGTTGGAAGGATAATAACCTTGCTGTTTGATTTTGCAAACTTGCTTTCT  50

seq1  TGATGTAGCTG-TCAAGATATTGTCTTGAGTGTCAGCAGAGACTTTAGAC  96
      ||||||||||| ||||||||||||| ||||||||||||||||||||||||
seq2  TGATGTAGCTGTTCAAGATATTGTC-TGAGTGTCAGCAGAGACTTTAGAC  99

seq1  ATTTGAACAGTGCAGGAGCCTTTCT-AGATTCATCTTGGTTAAGATGAAA  145
      |||   ||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATT--GACAGTGCAGGAGCCTTTCTAAGATTCATCTTGGTTAAGATGAAA  147

seq1  GTGTATATACACTCAAAAATTTCCTTTTTCTTTCTTTACTTTTTTTTTTG  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATATACACTCAAAAATTTCCTTTTTCTTTCTTTACTTTTTTTTTTG  197

seq1  TTTATCCTATAATTTAGATATTCATTATCACCCTGATCACTGTCCCTACT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCTATAATTTAGATATTCATTATCACCCTGATCACTGTCCCTACT  247

seq1  CTAGGTCCCTGCCCTCACAGATTCCCTCCTCCCAATCTCCTCTGTTTCTT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTCCCTGCCCTCACAGATTCCCTCCTCCCAATCTCCTCTGTTTCTT  297

seq1  TTTTGAGTGGGGTTGGGGCCCCCTGTGTACCCCGTGGGCACATAGGTTGT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGTGGGGTTGGGGCCCCCTGTGTACCCCGTGGGCACATAGGTTGT  347

seq1  AGTCTGTTTTTTAGGATGGCATATGCTCATGACATCAATACTGCCTGAGG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTTTTTTAGGATGGCATATGCTCATGACATCAATACTGCCTGAGG  397

seq1  CTTCAGAGTCATTGGATTCTGGGTATTGATATTTCCCCAAACTCTTGTGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGAGTCATTGGATTCTGGGTATTGATATTTCCCCAAACTCTTGTGT  447

seq1  TTGTTTTGAAATTTTTAAATAAATAGGGGTGTTTTGCTTGTATGCGTGAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGAAATTTTTAAATAAATAGGGGTGTTTTGCTTGTATGCGTGAA  497

seq1  TATGAATATCATGTGTGCTTCATCGTTAGTTTTGTTTGAAGGTGGACTCA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATATCATGTGTGCTTCATCGTTAGTTTTGTTTGAAGGTGGACTCA  547

seq1  GAACTCCTGTTCATAAAGCCATGGGTCACGTGAATGCTAGTATTGACCAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCCTGTTCATAAAGCCATGGGTCACGTGAATGCTAGTATTGACCAC  597

seq1  TGTTATCTGGAAGACCAGCAAGAGCTTTCCACAGCTGAGTTATAGCTCTC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATCTGGAAGACCAGCAAGAGCTTTCCACAGCTGAGTTATAGCTCTC  647

seq1  TCCTGCCTTATGTTGCTCTTTATGTTCAACACTTATATTACTAATATTTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCCTTATGTTGCTCTTTATGTTCAACACTTATATTACTAATATTTT  697

seq1  CATCTGTCCATTGGTCCATTAAATGTGCCTTGATTGCCAGTAAAGTTTTA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTCCATTGGTCCATTAAATGTGCCTTGATTGCCAGTAAAGTTTTA  747

seq1  CTAATGGTGCAGTTTAAAGCGGTACACTTCCTGTTTCTGCTAGATGAGTA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGGTGCAGTTTAAAGCGGTACACTTCCTGTTTCTGCTAGATGAGTA  797

seq1  CAGAAGTGCAGGGAATGTATACTTCTTTGAAGGAACTGTAGTAAACAACT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTGCAGGGAATGTATACTTCTTTGAAGGAACTGTAGTAAACAACT  847

seq1  GAATTCTTTCTATCATTTTTGTCTCCCTGGTTGATTTTTGCAGTGGAGTA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTATCATTTTTGTCTCCCTGGTTGATTTTTGCAGTGGAGTA  897

seq1  AGGATCTTAATATGTAACCTTTGCTGTCCTGGAATGTGTTACATAGAACA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCTTAATATGTAACCTTTGCTGTCCTGGAATGTGTTACATAGAACA  947

seq1  GACTAAGATCCAGGTCAATGATGTATACCTGCCCGTGACTCTGGGATTAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAGATCCAGGTCAATGATGTATACCTGCCCGTGACTCTGGGATTAA  997

seq1  AGACATGAACAAATACACCCTGCTTGTCCATGATTTTTCTCGTTAGTGAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGAACAAATACACCCTGCTTGTCCATGATTTTTCTCGTTAGTGAT  1047

seq1  TCTTCTTACAAATTATGGGATATGTGCTCAGTACTGTTGATCTGTTTCAC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTACAAATTATGGGATATGTGCTCAGTACTGTTGATCTGTTTCAC  1097

seq1  CCTACATCTCCCTCTCAATTGGAATTC  1122
      |||||||||||||||||||||||||||
seq2  CCTACATCTCCCTCTCAATTGGAATTC  1124

seq1: chr12_22990314_22991398
seq2: B6Ng01-303J19.g_66_1146

seq1  GAATTCAGGGGGTTCTGAGGCTAAAGGTGGGATTGGGGAGCAAAAGGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGGGTTCTGAGGCTAAAGGTGGGATTGGGGAGCAAAAGGGTG  50

seq1  GGCTCCCTTCCAGCCGGGAAGCAGTATCCCCGGTTCCACTCCACGCCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCCTTCCAGCCGGGAAGCAGTATCCCCGGTTCCACTCCACGCCCTC  100

seq1  TGGGCAACGTTGCTAGAGGTCATGGCGGGTGCCGGGCACCGCAGTCCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAACGTTGCTAGAGGTCATGGCGGGTGCCGGGCACCGCAGTCCAGG  150

seq1  ACAGGGCGCGCCCACGAACCCAAGCACGTCCGGAAGGCAGAGGTAATGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGCGCGCCCACGAACCCAAGCACGTCCGGAAGGCAGAGGTAATGCA  200

seq1  GCAGACCACAGCCACTGACAGGCCCTGAGCGCTCATAGCCCTCCTTGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACCACAGCCACTGACAGGCCCTGAGCGCTCATAGCCCTCCTTGCTG  250

seq1  AGGCCTCCGCTTCCTGGCGGCGCGGTAGCGGCGGGCGACCCGATTGGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTCCGCTTCCTGGCGGCGCGGTAGCGGCGGGCGACCCGATTGGTGG  300

seq1  TCAGGTCTGCGCCCCGCCCCGCCGGGGGTCCTCCGCGCCCTCCCCAGCCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTCTGCGCCCCGCCCCGCCGGGGGTCCTCCGCGCCCTCCCCAGCCG  350

seq1  GGCCCTCCCCTTTCCGCGGGAGGCGTCCAGGACAGTGGCTTGGTGGCGCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTCCCCTTTCCGCGGGAGGCGTCCAGGACAGTGGCTTGGTGGCGCG  400

seq1  CAGTTCCCCCTGACTGTGCGCGCCCGCGTGTGGGCTCCTTTGCAGAGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCCCCTGACTGTGCGCGCCCGCGTGTGGGCTCCTTTGCAGAGGAC  450

seq1  TCGGTAGCTGCAGCTCCCGGAGCACAGCGGACAGAGCTGCGGGCTGCGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTAGCTGCAGCTCCCGGAGCACAGCGGACAGAGCTGCGGGCTGCGTG  500

seq1  CGCCCCTGCTGCCACCGGGCCTGCCGCGGTGGCTCCCGCGCCCCGCGGCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCCTGCTGCCACCGGGCCTGCCGCGGTGGCTCCCGCGCCCCGCGGCG  550

seq1  ACTTCCGCTCCCGCGCTTCTCTTTGTTCAAGTCCCCGAGCGGCGGCGGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCGCTCCCGCGCTTCTCTTTGTTCAAGTCCCCGAGCGGCGGCGGGG  600

seq1  TCGGAGCCCGCGCCTTGGGCGACTGAGGCGGCCGCAGTCCGCGCCCCGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGAGCCCGCGCCTTGGGCGACTGAGGCGGCCGCAGTCCGCGCCCCGGC  650

seq1  GCCCTGGCGATGCCGGACCAGATCTCTGTGTCGGAATTCGTGGCCGAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGCGATGCCGGACCAGATCTCTGTGTCGGAATTCGTGGCCGAGAC  700

seq1  CCTTGAGGACTACAAGGCGCCCACTGCCTCTAGCTTCACGCGCACGGCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAGGACTACAAGGCGCCCACTGCCTCTAGCTTCACGCGCACGGCCC  750

seq1  AGTGCCGGAACACCGCGGCGGCCATCGAGGAGGTGAGTGGTAGCTTAGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCGGAACACCGCGGCGGCCATCGAGGAGGTGAGTGGTAGCTTAGCC  800

seq1  GGCGCCCGGCGGGAGGCTTAGGGTCGCGGGGATCGCGCTGCGCCCTGGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCCCGGCGGGAGGCTTAGGGTCGCGGGGATCGCGCTGCGCCCTGGGC  850

seq1  ACCCGCTAGGCTTCCGCGCCTGGTGCCCGATACCCAGT-GCCCTCC-GGC  898
      ||||||||||||||||||||||||||| |||||||||| ||||||| |||
seq2  ACCCGCTAGGCTTCCGCGCCTGGTGCCGGATACCCAGTGGCCCTCCGGGC  900

seq1  TGCGCCCACACCCGGG-AAAAGTTTCTGGTACCCCAAAGCCGGACGCAGC  947
      |||||||||||||||| ||||||||||||||||||||  |||||||||||
seq2  TGCGCCCACACCCGGGAAAAAGTTTCTGGTACCCCAAGCCCGGACGCAGC  950

seq1  CGGACCAGCAGTGCCCGA-CACAGAAGCCCTTTGTTCCCTGCTCTAGGGA  996
      | || ||||||||||||| |||||||||||||||||||||||||||||||
seq2  CAGAACAGCAGTGCCCGACCACAGAAGCCCTTTGTTCCCTGCTCTAGGGA  1000

seq1  GAGGCTGCTTGGCCACCTTGGGCCTTTTTTGGGAACGCTCCTGTCTGTTC  1046
      ||| |||||||||||||||||||||||||  |  ||||||||||||| | 
seq2  GAGCCTGCTTGGCCACCTTGGGCCTTTTT--GCGACGCTCCTGTCTGGT-  1047

seq1  CCATTTCCCTCGCAGTTTTTCAGGTTCTTTGCTCCCATC  1085
       ||||  | |||||| |||||||  || |||||||||||
seq2  ACATT--CTTCGCAG-TTTTCAG--TCCTTGCTCCCATC  1081