BAC Information

Click to search

BAC

Clone NameB6Ng01-304M04
Chromosome12 (Build37)
Map Location 92,462,457 - 92,463,650
singlet/doubletsinglet
Overlap gene4930534B04Rik
Upstream geneNrxn3, LOC100039498, LOC100039287, Dio2, LOC100039295, 4930544I03Rik, 5430427M07Rik
Downstream geneTshr, Gtf2a1, Ston2, EG666955, LOC100039631, Sel1l, LOC100039367, EG432681, LOC667589, LOC100039387, LOC100039425, LOC628116
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304M04.bB6Ng01-304M04.g
ACCGA098230GA098231
length1,183686
definitionB6Ng01-304M04.b B6Ng01-304M04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatgttaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataacttttaatcaatag
tatcttcaaatcttacttctcaatatgatcagaaaggaaaaagagctcca
aaataagagtatattttaaaatacaaatgattttcccctaaactgtatat
ttctcatatgtataacccaaagcatattgccaacaacgaaacaaatagta
agatattttcattttttgagaggatagactattagatggttattcatatc
ctaaacaagcatagacatggtcaaatacttttcacaaaaagaggcaatat
ctaaaaacataaagttttatttgcatatgtatcaccaaagtaacacagaa
tgcaaagtgatcagcaaagtgcaccacacccttcttagcaagtcaggagc
ttctgttctcaggtaagactcaaaaccataagcagccagttgtctgacct
gcaaccggagcagcttcgctagcgtctctcccgccatttgaactgcacac
agaaaacacggctcggttcagtgcctagcacgggtatactattaacacac
gaaggccactctgagaaagatcccaaacagatcagcacaggcactaccca
atactaagacatattatcttctgttagcaagaaactacagctctacatgg
cttgctagattatgacaaatctctccgtaatctacagacacgtacctggc
attcctttaaatagcctaactctaaactccctt
gaattctttgtatatattggatgttagccctctatgggatgttagggttg
gtaaagatcttttcccaatctgttggttgccattttgttgtattgacact
gtcctttgccttacagaagttttgcaattttatgaggtcccatttgtcta
tttttgatcttagagcataagtcatttgtgttctgtttaggaaaatttcc
cctgtatccatgtgctcaaggctcttccccactttctcttctgttagttt
cattgaatctggttttatgtggtggtccttgatccacttggacttgagct
ttgtacaggagataaaaatgcccaaaagtcctgattatccaagagtcaat
tcatagaccacatgaagccctagaagaagaaggaagaccaaaatgtggat
gtttccatgcttcttagaaggttgaacaaaatactcacaagaggaaatat
ggagacaaaatgtggagcagaaactgaaggaaaggccacccagagactgt
cccacctggggttccatcctatatacagtcaccaaagctggacactattg
tggatgccaggaagtggttgctgatggaagcctgatatgactgtctcctg
agaggctctgccagagcctgacaaatatagaggtggttgattgcaactaa
ccattgaactgagcatgggggtggggtgtgaggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_92462457_92463650
seq2: B6Ng01-304M04.b_45_1227

seq1  GAATTCCTGATCTTTCCAGAACTTTTATCATGAATGGGTGTTGGATCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGATCTTTCCAGAACTTTTATCATGAATGGGTGTTGGATCTTG  50

seq1  TCAAATGCTTTTTCTGCATCTAACGAGATGATCATGTGGTTTTTGTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGCTTTTTCTGCATCTAACGAGATGATCATGTGGTTTTTGTCTTT  100

seq1  GAGTTTGTTTATATAATGGATTACATTGATGGATTTTCGTATGTTAAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTGTTTATATAATGGATTACATTGATGGATTTTCGTATGTTAAACC  150

seq1  ATCCCTGCATCCCTGGAATAAAACCTACTTGGTCAGGATGGATGATTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTGCATCCCTGGAATAAAACCTACTTGGTCAGGATGGATGATTGCT  200

seq1  TTAATGTGTTCTTGGATTCGGTTAGCGAGAATTTTATTAAGGATTTTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTGTTCTTGGATTCGGTTAGCGAGAATTTTATTAAGGATTTTTGC  250

seq1  ATCGATGTTCATAAGAGAAATTGGTCTGAAGTTCTCTATCTTTGTTGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGATGTTCATAAGAGAAATTGGTCTGAAGTTCTCTATCTTTGTTGGAT  300

seq1  CTTTCTGTGGTTTAGGTATCAGAGTAATAGTGGCTTCATAAAATGAGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTGGTTTAGGTATCAGAGTAATAGTGGCTTCATAAAATGAGTTG  350

seq1  GGTAGAATACCTTCTACTTCTATCTTGTGAAAAAGTTTGTGCAGAACTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAATACCTTCTACTTCTATCTTGTGAAAAAGTTTGTGCAGAACTGG  400

seq1  AGTTAGATCTTCTTTGAAGGTCTGATAGAACTCTGCACTAAACCCGTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGATCTTCTTTGAAGGTCTGATAGAACTCTGCACTAAACCCGTCTG  450

seq1  GTCCTGGGCTTTTTTTGGCTGGGAGACTATTAATAACTTTTAATCAATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGGGCTTTTTTTGGCTGGGAGACTATTAATAACTTTTAATCAATAG  500

seq1  TATCTTCAAATCTTACTTCTCAATATGATCAGAAAGGAAAAAGAGCTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCAAATCTTACTTCTCAATATGATCAGAAAGGAAAAAGAGCTCCA  550

seq1  AAATAAGAGTATATTTTAAAATACAAATGATTTTCCCCTAAACTGTATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGAGTATATTTTAAAATACAAATGATTTTCCCCTAAACTGTATAT  600

seq1  TTCTCATATGTATAACCCAAAGCATATTGCCAACAACGAAACAAATAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATATGTATAACCCAAAGCATATTGCCAACAACGAAACAAATAGTA  650

seq1  AGATATTTTCATTTTTTGAGAGGATAGACTATTAGATGGTTATTCATATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTTTCATTTTTTGAGAGGATAGACTATTAGATGGTTATTCATATC  700

seq1  CTAAACAAGCATAGACATGGTCAAATACTTTTCACAAAAAGAGGCAATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACAAGCATAGACATGGTCAAATACTTTTCACAAAAAGAGGCAATAT  750

seq1  CTAAAAACATAAAGTTTTATTTGCATATGTATCACCAAAGTAACACAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAACATAAAGTTTTATTTGCATATGTATCACCAAAGTAACACAGAA  800

seq1  TGCAAAGTGATCAGCAAAGTGCACCACACCCTTCTTAGCAAGTCAGGAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAGTGATCAGCAAAGTGCACCACACCCTTCTTAGCAAGTCAGGAGC  850

seq1  TTCTGTTCTCAGGTAAGACTCAAAACCATAAGCAGCCAGTTGTCTGACCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTCTCAGGTAAGACTCAAAACCATAAGCAGCCAGTTGTCTGACCT  900

seq1  GCAACCGGAGCAGCTTCGCTAGCGTCTCTCCCGCCATTTGAACTGCACCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GCAACCGGAGCAGCTTCGCTAGCGTCTCTCCCGCCATTTGAACTGCA-CA  949

seq1  CAGAAAACACGGCTCGGTCCAGTGCCTAGCACGGGTAATACTATTAACAC  1000
      |||||||||||||||||| ||||||||||||||||| |||||||||||||
seq2  CAGAAAACACGGCTCGGTTCAGTGCCTAGCACGGGT-ATACTATTAACAC  998

seq1  ACGAAGGGCCACTCTGAGAAAGATCCCAAAACAGATCAGCACAGGGAACT  1050
      ||||| ||||||||||||||||||||| ||||||||||||||||| |   
seq2  ACGAA-GGCCACTCTGAGAAAGATCCC-AAACAGATCAGCACAGGCA--C  1044

seq1  TACCCAATACTAGGACATATTATTCTCTGTAAGCAAAGGAAACTACAGCC  1100
      |||||||||||| ||||||||||  ||||| |||||  |||||||||| |
seq2  TACCCAATACTAAGACATATTATCTTCTGTTAGCAA--GAAACTACAG-C  1091

seq1  TCTACATGGCCTGCTAGAATTTATGACAAAATCTCCTCCTTAATCTACAG  1150
      |||||||||| |||||||  ||||||| |||||| |||| ||||||||||
seq2  TCTACATGGCTTGCTAGA--TTATGAC-AAATCT-CTCCGTAATCTACAG  1137

seq1  GAACCACTTACCTGGCATTC--TTTAATAG-CTA--TCTCAACTCCCTT  1194
          ||| ||||||||||||  || ||||| |||  ||| |||||||||
seq2  ---ACACGTACCTGGCATTCCTTTAAATAGCCTAACTCTAAACTCCCTT  1183