BAC Information

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BAC

Clone NameB6Ng01-305G06
Chromosome12 (Build37)
Map Location 70,526,789 - 70,630,145
singlet/doubletdoublet
Overlap geneLOC100040856, LOC100040862
Upstream geneLOC100040696, LOC665967, LOC665973, Rps29, Ppil5, Rpl36al, Mgat2, 1110034A24Rik, 9330151L19Rik, Pole2, Klhdc1, Klhdc2, Sdccag1, Arf6
Downstream geneGm71, Sos2, LOC100040879, L2hgdh, Atp5s, Cdkl1, Map4k5, Spg3a, EG622339, Sav1, LOC100040999, Nin, ENSMUSG00000056391, Gm804, Pygl, Trim9, Txndc1, LOC100040965
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305G06.bB6Ng01-305G06.g
ACCGA098693GA098694
length934896
definitionB6Ng01-305G06.b B6Ng01-305G06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,629,205 - 70,630,145)(70,526,789 - 70,527,681)
sequence
gaattctaaccaccaccaccctccccccccacccctcccacccccgagga
tatatttattgatttcactatccccatctgtagaactctcacctctatgc
agcaggaaaaaggtaaaagaaccataaatattttagataagttctctaat
ctcggtgccctcagtccctaaagtaagcccaactgggacatctcaggagc
accagtgtctgtcagtgtgtgtttgtggcttcaggacagtcttcagtggg
agcttcctcccaatgaaccagatgcctgactgcctgagactggtactctc
cagtctagacacttgtgtagatgccaaaagaagtgagttctcacagagag
ccctggctaaaactcagaccagcagctggcaggcagctgacaccgaccca
gagctagctcctagttctctctctctatctgtctgtctgtctcactctgt
ctgtctctctcattgaggcattatatttatacatactgtaagtatgtatt
gtatcctggaaaaggaatcccttggactgtcccttccatgggtcttgctt
tgttttgccttcccttggtccatgacaacagcaaaggttatcaatacaaa
taaagtactgatgagagtagccagcttttattctaataaatcaagttgca
gatcaagcctgggccagatcactccacacttgtttaatctgcctgtgagg
attatgacaaagtcaacaatgacttcaactgcctcctgcttaactgtcgc
agttagaaaatggatggtagcttttggagcgtggccacgtaaggagatgg
cacttgctctttcctcctctgtttggtgctcccaagagcatgtgcgggac
acacacggtccatcatttacggcagcaatgaaagggggctgatgagtgac
agcaagaggaggtgttgtgtgtgtgtgtgtgtag
gaattcctcattccatagttttgagtagttgttacagtgttttaattctc
aagggtcatttggaagctcagagtgtggcagtgttgacatccagagagtt
tctagttcccaaattgtattaatgatggctgagaccaccactgtcctggc
cagtgtacgacatgtcaaaccagatggcttttccctcttcgtttttgtgg
tagtctttgaatcatgaggatttttgacaagtccactgcctagatttatg
tgtccctgggtctcccacaaagttaagatttgaagatttgacaacctccc
aaggaaatggctctagttgctgacgatggaggaatcctgaccttccttcc
tatttccaggactctcttaatctgataaacattccactttctttatatat
ttacatttcctttatagggccctctacactacttaataaaatcaatagct
taaactttaaaattagaaattctaaaggagcctttaatctcagcacttgg
gaggcagaggcaggtggatttctgagttcaaggccagcctggtctacaga
gtgagttccaggacagccagggctacacagagaaaccctgtctcaaaaac
caaaaaaaaaaaaaaaaaaaatcctaaaggagaatgtcagccaggtttgt
tggtacacatctataatcccagtgctacagagactgatgcaggaggatcc
ctgtgagtttgcagcctgggttacatagcaagacctgtcaaagtgggggt
ggggaaattcacatgagaacgtattctttctgccgtacggaaaaccttcc
atcagggccagacgcacaaagccttttctgttctttttcacagagaataa
aaggataggtccctacagggctgggggggctgggggggttaggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_70629205_70630145
seq2: B6Ng01-305G06.b_44_977 (reverse)

seq1  CTACACACACACACACACACACACACACACACCTCCTCTTGCTGTCACTC  50
      |||||||||||||||||||         ||||||||||||||||||||||
seq2  CTACACACACACACACACA---------ACACCTCCTCTTGCTGTCACTC  41

seq1  ATCAGCCCCCTTCCATTGCTGCCGTAAATGATGGACCGTGTGTGTCCCGC  100
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATCAGCCCCCTTTCATTGCTGCCGTAAATGATGGACCGTGTGTGTCCCGC  91

seq1  ACATGCTCTTGGGAGCACC-AACAGAGGAGGAAAGAGCAAGTGCCATCTC  149
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ACATGCTCTTGGGAGCACCAAACAGAGGAGGAAAGAGCAAGTGCCATCTC  141

seq1  CTTACGTGGCCACGCTCC-AAAGCTACCATCCATTTTCTAACTGCGACAG  198
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTTACGTGGCCACGCTCCAAAAGCTACCATCCATTTTCTAACTGCGACAG  191

seq1  TTAAGCAGGAGGCAGTTGAAGTCATTGTTGACTTTGTCATAATCCTCACA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCAGGAGGCAGTTGAAGTCATTGTTGACTTTGTCATAATCCTCACA  241

seq1  GGCAGATTAAACAAGTGTGGAGTGATCTGGCCCAGGCTTGATCTGCAACT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGATTAAACAAGTGTGGAGTGATCTGGCCCAGGCTTGATCTGCAACT  291

seq1  TGATTTATTAGAATAAAAGCTGGCTACTCTCATCAGTACTTTATTTGTAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTATTAGAATAAAAGCTGGCTACTCTCATCAGTACTTTATTTGTAT  341

seq1  TGATAACCTTTGCTGTTGTCATGGACCAAGGGAAGGCAAAACAAAGCAAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAACCTTTGCTGTTGTCATGGACCAAGGGAAGGCAAAACAAAGCAAG  391

seq1  ACCCATGGAAGGGACAGTCCAAGGGATTCCTTTTCCAGGATACAATACAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATGGAAGGGACAGTCCAAGGGATTCCTTTTCCAGGATACAATACAT  441

seq1  ACTTACAGTATGTATAAATATAATGCCTCAATGAGAGAGACAGACAGAGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACAGTATGTATAAATATAATGCCTCAATGAGAGAGACAGACAGAGT  491

seq1  GAGACAGACAGACAGATAGAGAGAGAGAACTAGGAGCTAGCTCTGGGTCG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGACAGACAGATAGAGAGAGAGAACTAGGAGCTAGCTCTGGGTCG  541

seq1  GTGTCAGCTGCCTGCCAGCTGCTGGTCTGAGTTTTAGCCAGGGCTCTCTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAGCTGCCTGCCAGCTGCTGGTCTGAGTTTTAGCCAGGGCTCTCTG  591

seq1  TGAGAACTCACTTCTTTTGGCATCTACACAAGTGTCTAGACTGGAGAGTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAACTCACTTCTTTTGGCATCTACACAAGTGTCTAGACTGGAGAGTA  641

seq1  CCAGTCTCAGGCAGTCAGGCATCTGGTTCATTGGGAGGAAGCTCCCACTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTCAGGCAGTCAGGCATCTGGTTCATTGGGAGGAAGCTCCCACTG  691

seq1  AAGACTGTCCTGAAGCCACAAACACACACTGACAGACACTGGTGCTCCTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGTCCTGAAGCCACAAACACACACTGACAGACACTGGTGCTCCTG  741

seq1  AGATGTCCCAGTTGGGCTTACTTTAGGGACTGAGGGCACCGAGATTAGAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTCCCAGTTGGGCTTACTTTAGGGACTGAGGGCACCGAGATTAGAG  791

seq1  AACTTATCTAAAATATTTATGGTTCTTTTACCTTTTTCCTGCTGCATAGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTATCTAAAATATTTATGGTTCTTTTACCTTTTTCCTGCTGCATAGA  841

seq1  GGTGAGAGTTCTACAGATGGGGATAGTGAAATCAATAAATATATCCTCGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGAGTTCTACAGATGGGGATAGTGAAATCAATAAATATATCCTCGG  891

seq1  GGGTGGGAGGGGTGGGGGGGGAGGGTGGTGGTGGTTAGAATTC  941
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGGAGGGGTGGGGGGGGAGGGTGGTGGTGGTTAGAATTC  934

seq1: chr12_70526789_70527681
seq2: B6Ng01-305G06.g_67_962

seq1  GAATTCCTCATTCCATAGTTTTGAGTAGTTGTTACAGTGTTTTAATTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCATTCCATAGTTTTGAGTAGTTGTTACAGTGTTTTAATTCTC  50

seq1  AAGGGTCATTTGGAAGCTCAGAGTGTGGCAGTGTTGACATCCAGAGAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTCATTTGGAAGCTCAGAGTGTGGCAGTGTTGACATCCAGAGAGTT  100

seq1  TCTAGTTCCCAAATTGTATTAATGATGGCTGAGACCACCACTGTCCTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTTCCCAAATTGTATTAATGATGGCTGAGACCACCACTGTCCTGGC  150

seq1  CAGTGTACGACATGTCAAACCAGATGGCTTTTCCCTCTTCGTTTTTGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTACGACATGTCAAACCAGATGGCTTTTCCCTCTTCGTTTTTGTGG  200

seq1  TAGTCTTTGAATCATGAGGATTTTTGACAAGTCCACTGCCTAGATTTATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTTTGAATCATGAGGATTTTTGACAAGTCCACTGCCTAGATTTATG  250

seq1  TGTCCCTGGGTCTCCCACAAAGTTAAGATTTGAAGATTTGACAACCTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTGGGTCTCCCACAAAGTTAAGATTTGAAGATTTGACAACCTCCC  300

seq1  AAGGAAATGGCTCTAGTTGCTGACGATGGAGGAATCCTGACCTTCCTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAATGGCTCTAGTTGCTGACGATGGAGGAATCCTGACCTTCCTTCC  350

seq1  TATTTCCAGGACTCTCTTAATCTGATAAACATTCCACTTTCTTTATATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCAGGACTCTCTTAATCTGATAAACATTCCACTTTCTTTATATAT  400

seq1  TTACATTTCCTTTATAGGGCCCTCTACACTACTTAATAAAATCAATAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTTCCTTTATAGGGCCCTCTACACTACTTAATAAAATCAATAGCT  450

seq1  TAAACTTTAAAATTAGAAATTCTAAAGGAGCCTTTAATCTCAGCACTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTTAAAATTAGAAATTCTAAAGGAGCCTTTAATCTCAGCACTTGG  500

seq1  GAGGCAGAGGCAGGTGGATTTCTGAGTTCAAGGCCAGCCTGGTCTACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGAGGCAGGTGGATTTCTGAGTTCAAGGCCAGCCTGGTCTACAGA  550

seq1  GTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAAAAC  600

seq1  CAAAAAAAAAAAAAAAAAAAATCCTAAAGGAGAATGTCAGCCAGGTTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAAAAAAAAAAAAAAATCCTAAAGGAGAATGTCAGCCAGGTTTGT  650

seq1  TGGTACACATCTATAATCCCAGTGCTACAGAGACTGATGCAGGAGGATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACACATCTATAATCCCAGTGCTACAGAGACTGATGCAGGAGGATCC  700

seq1  CTGTGAGTTTGCAGCCTGGGTTACATAGCAAGACCTGTCAAAGTGGGGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGTTTGCAGCCTGGGTTACATAGCAAGACCTGTCAAAGTGGGGGT  750

seq1  GGGGAAATTCACATGAGAACGTATTCTTTCTGCCGTACGGAAAACC-TCC  799
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGGGAAATTCACATGAGAACGTATTCTTTCTGCCGTACGGAAAACCTTCC  800

seq1  ATCAGGGCCAGACGCACAAAGCCTTTTCTGTTCTTTTTCACAGAGAAGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATCAGGGCCAGACGCACAAAGCCTTTTCTGTTCTTTTTCACAGAGAATAA  850

seq1  GAGGATAGGTCCCTACAGGGCT-GGGGGGCTGGGGGGG-TAGGAGG  893
       ||||||||||||||||||||| ||||||||||||||| |||||||
seq2  AAGGATAGGTCCCTACAGGGCTGGGGGGGCTGGGGGGGTTAGGAGG  896