BAC Information

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BAC

Clone NameB6Ng01-307A20
Chromosome12 (Build37)
Map Location 26,055,312 - 26,056,411
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668714, LOC629364, Taf1b, Grhl1, EG629383, Klf11, Cys1, Rrm2, LOC668719, Mboat2, EG629397, C330002I19Rik, Id2
Downstream geneLOC100042973, LOC100042974, LOC668726, Rnf144
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307A20.bB6Ng01-307A20.g
ACCGA099926GA099927
length4621,111
definitionB6Ng01-307A20.b B6Ng01-307A20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tatcagacctttaaagaagacctaataccaatattcttcaaactatgcca
caaaatagaaacagaaggaacactacccaattcattctatgaagcctccg
ttacactgagtactctcccttggagatggaatggtttctgtctaatcagg
aacttgtcacaatttcctttcatagagggcttcataagagatttttttct
actattatatttaatgtcccaaatagattttaaaaactagctgagtgcat
attacttttagtgtcagaagatatcatgtatctttttagagacatttaac
tattataaattattttgatgacttaaaaatgtcaatactaaattgtatat
ttttaaataaattttattaatttaataagaaaggaaggaaggaaggaagg
aaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaa
ggaaggaaggga
gaattctcagtgcttgtgataaatatttatgcttctcagtgatgggtctg
gaactgaagttatgctatttctagtaggtgtgagtgggcttgaatccagg
cctgggtgggacttgaacttgcttcaaaggtcttgtgctagagcctacac
tgaagaggaggagggtcactattataatgaggagccttaggagcacagaa
ggacaaagcaactacgagagcacagttataacactcatccccattgtctc
cttgcatctcattggctaggatgagctcgtgtccaatcccacagtcactg
aaagcatatgtgctctgttccaaggggataggttatggatatttgctaag
cagtaattaatttcagtgctagtctgaaggggatttagtgaaatggattc
tcaagctctttcttgattctctactgctttctagcaccctaaagggaaca
aaaccctgttgtcaggggttgtagtcattccctgatctggattcagagct
gggcaggggccattatttgagttgtggatttagcagtttggtattcacac
atccctgatggtcttggaaaacataatgttttctaacagctgtaaagaca
agagatctaatgttaccagctatacataatatccatgaaattacattgaa
taatgtaatggactgttatactgtcattaacacattctgaatacctaatt
tgaaaggttaatgaaattgacaaacatgaccactctggggctcatcaata
ccacttaataatgaagctcttgtttttcagttatagaatcaacagaagtg
ggaagacttcatgtctggaaccgcacattttttttttattgtaaattaag
aggctctgcacaatgtttttgctataatttgtagtgtggggttagaaagg
cattttacacagcagcttttattgtagtaataattaattaatattaaaga
cttgttataatttgacatggtttatgtttagcttttctgaacagatgaag
cttggttgagggaaaatgtgtttcattggaataaatggagaatgataatg
aaccaagacagttcccaaggtctatagactttttagtcacacagtgtttc
cgtgttgaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_26055312_26056411
seq2: B6Ng01-307A20.g_68_1178

seq1  GAATTCTCAGTGCTTGTGATAAATATTTATGCTTCTCAGTGATGGGTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGTGCTTGTGATAAATATTTATGCTTCTCAGTGATGGGTCTG  50

seq1  GAACTGAAGTTATGCTATTTCTAGTAGGTGTGAGTGGGCTTGAATCCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGAAGTTATGCTATTTCTAGTAGGTGTGAGTGGGCTTGAATCCAGG  100

seq1  CCTGGGTGGGACTTGAACTTGCTTCAAAGGTCTTGTGCTAGAGCCTACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGTGGGACTTGAACTTGCTTCAAAGGTCTTGTGCTAGAGCCTACAC  150

seq1  TGAAGAGGAGGAGGGTCACTATTATAATGAGGAGCCTTAGGAGCACAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGGAGGAGGGTCACTATTATAATGAGGAGCCTTAGGAGCACAGAA  200

seq1  GGACAAAGCAACTACGAGAGCACAGTTATAACACTCATCCCCATTGTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAAGCAACTACGAGAGCACAGTTATAACACTCATCCCCATTGTCTC  250

seq1  CTTGCATCTCATTGGCTAGGATGAGCTCGTGTCCAATCCCACAGTCACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCATCTCATTGGCTAGGATGAGCTCGTGTCCAATCCCACAGTCACTG  300

seq1  AAAGCATATGTGCTCTGTTCCAAGGGGATAGGTTATGGATATTTGCTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATATGTGCTCTGTTCCAAGGGGATAGGTTATGGATATTTGCTAAG  350

seq1  CAGTAATTAATTTCAGTGCTAGTCTGAAGGGGATTTAGTGAAATGGATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAATTAATTTCAGTGCTAGTCTGAAGGGGATTTAGTGAAATGGATTC  400

seq1  TCAAGCTCTTTCTTGATTCTCTACTGCTTTCTAGCACCCTAAAGGGAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCTCTTTCTTGATTCTCTACTGCTTTCTAGCACCCTAAAGGGAACA  450

seq1  AAACCCTGTTGTCAGGGGTTGTAGTCATTCCCTGATCTGGATTCAGAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTGTTGTCAGGGGTTGTAGTCATTCCCTGATCTGGATTCAGAGCT  500

seq1  GGGCAGGGGCCATTATTTGAGTTGTGGATTTAGCAGTTTGGTATTCACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGGGGCCATTATTTGAGTTGTGGATTTAGCAGTTTGGTATTCACAC  550

seq1  ATCCCTGATGGTCTTGGAAAACATAATGTTTTCTAACAGCTGTAAAGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTGATGGTCTTGGAAAACATAATGTTTTCTAACAGCTGTAAAGACA  600

seq1  AGAGATCTAATGTTACCAGCTATACATAATATCCATGAAATTACATTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATCTAATGTTACCAGCTATACATAATATCCATGAAATTACATTGAA  650

seq1  TAATGTAATGGACTGTTATACTGTCATTAACACATTCTGAATACCTAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTAATGGACTGTTATACTGTCATTAACACATTCTGAATACCTAATT  700

seq1  TGAAAGGTTAATGAAATTGACAAACATGACCACTCTGGGGCTCATCAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGTTAATGAAATTGACAAACATGACCACTCTGGGGCTCATCAATA  750

seq1  CCACTTAATAATGAAGCTCTTGTTTTTCAGTTATAGAATCAACAGAAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTAATAATGAAGCTCTTGTTTTTCAGTTATAGAATCAACAGAAGTG  800

seq1  GGAAGACTTCATGTCTGGAACCGCACA-TTTTTTTTTATTGTAAATTAAG  849
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGAAGACTTCATGTCTGGAACCGCACATTTTTTTTTTATTGTAAATTAAG  850

seq1  AGGCTCTGCACAATG-TTTTGCTATAATTTGTAGTGTGGGGTTAGAAA-G  897
      ||||||||||||||| |||||||||||||||||||||||||||||||| |
seq2  AGGCTCTGCACAATGTTTTTGCTATAATTTGTAGTGTGGGGTTAGAAAGG  900

seq1  CATTTTACACAGCAGCTTT--ATGTAGTAATAA-TAATTAATA-TAAAGA  943
      |||||||||||||||||||   ||||||||||| ||||||||| ||||||
seq2  CATTTTACACAGCAGCTTTTATTGTAGTAATAATTAATTAATATTAAAGA  950

seq1  CTTGTTATAATTTGACATGG-TTATGTTTTAGCTTTTCTGAACAGATGAA  992
      |||||||||||||||||||| ||||| |||||||||||||||||||||||
seq2  CTTGTTATAATTTGACATGGTTTATG-TTTAGCTTTTCTGAACAGATGAA  999

seq1  GCTTGG-TGAGGGAAAATGTGTTTCATTTGGATAGATGGAG-ATGATAAA  1040
      |||||| ||||||||||||||||||||| | ||| |||||| ||||||| 
seq2  GCTTGGTTGAGGGAAAATGTGTTTCATTGGAATAAATGGAGAATGATAAT  1049

seq1  GACCAAAGACAAGTTCCCAAGGTCTATAGGCTTTTTAG-CACACAGTGTT  1089
      || | ||||| |||||||||||||||||| |||||||| |||||||||||
seq2  GAACCAAGAC-AGTTCCCAAGGTCTATAGACTTTTTAGTCACACAGTGTT  1098

seq1  --CCTGTTGAAGG  1100
        | ||||||| |
seq2  TCCGTGTTGAAAG  1111