BAC Information

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BAC

Clone NameB6Ng01-307P24
Chromosome12 (Build37)
Map Location 102,699,644 - 102,700,716
singlet/doubletsinglet
Overlap gene4932415G16Rik
Upstream geneTtc7b, Rps6ka5, LOC100040123, 9030617O03Rik, EG667148, Gpr68, 0610010D24Rik, LOC100040184, Smek1, 4930463M05Rik, Mylf-ps
Downstream geneMtac2d1, Fbln5, Trip11, Atxn3, LOC100040305, LOC100040297, Cpsf2, Slc24a4, Rin3, Lgmn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307P24.bB6Ng01-307P24.g
ACCGA100620GA100621
length1,077696
definitionB6Ng01-307P24.b B6Ng01-307P24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgtagctgccatagctttcccccttcctgcctgtagctagact
gcacaataccccccaaaagacagaagtacaactgcttgtcttcctttaca
caaaattgggagaagaggggagcttcctaaggtgtttgggcctgcagttg
actccgtcagtttgaggagagagaaccatgttgtagaatataaacaacta
agaactgatttcttggtgtctctgttgttagaagtgctttcactgtttta
aaatcacacagcagtattctttcaagtcaccctggaatacttttgtactt
ttctggttctcgtgtctctgattattttcaaaagaggaaatatttttatt
cttctggagtttttaaatatcttagtttgtttaaaatgttttcagtgttc
ctttacaaaagaagaaaaaaaaaacctttatatatgttaaatttgcctta
actttaaccattttcatatccatgtcagatttctaagttttaaaaccaaa
acagttatctgtcaaagagtatccttacctactccagcctgctgagtaag
agtacataatgagtcttgagttccagtgacactcagctgcactgaggtcc
agggagagccctactccttctagcattgcatggagtgcttctcagacagg
aaagaacatatatggtgaaaagtagaaacttttgagtcagagcttagcaa
aaatcaaagcagagaaattaaaacaaaacacaacacaacaaaacgaaacg
aaacaaaacgaaacaaaagaaaacgaaacgccacttccaggaacatctac
tttgccataggaaagaccctgaccatgtgagctgatatgcattctttgat
tggctgagagtcttacatttgcttacttttttttttgttaatccattccc
aaaggactacctttttcctagagattttagccacttgggtcactgataat
aacatctgcttatactctagatttattctcctttttaattatctactgct
gatttgatagggattgcaaaagaaacaaagaagaaatgtttcattttgag
cagaaccctaggtccggtaattacaaa
gaattctttagatttagctaggagactgtaagaaaagcaaaggtattcta
cctacatctcactactatggacaatcttccttttttaaaatctttttttt
ttttattagaaaaactgattaagtctgaggtaatgaaggtgggaaggact
gaataatgtttccttaactcatgacaaaagaggaagccttttcagacaaa
attggccagaaaaaaagacctgtagagggaataaaagttgttggaaaaga
gttgatgatgggaaagtaggacgatatagatacatttgtgcagttaatgt
ataagatgccagagacctgggactgtgaagccccagagagactatgcaag
tgactctagttgagacttttgcagtgggagatagcccaaagtagccatct
cctgtattcaggcaggacttcagtgaaggtatatggaaaagaacccaccc
acaaaactatcgactgaaaatgtgtcctacctacaagatgtgcagggaca
aagatggagaaaagatggagggaatggccgatgactggcccaaattgaga
cccatcccatgggcaagaaccaatctattaatgatgctctgttatgcttg
tagacaggattctagcataacatcctctgagaggctccacccagcaccca
agggacacaaaagcagagacccaaaaccaaacattagaaggagtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_102699644_102700716
seq2: B6Ng01-307P24.b_47_1123

seq1  GAATTCTTGTAGCTGCCATAGCTTTCCCCCTTCCTGCCTGTAGCTAGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTAGCTGCCATAGCTTTCCCCCTTCCTGCCTGTAGCTAGACT  50

seq1  GCACAATACCCCCCAAAAGACAGAAGTACAACTGCTTGTCTTCCTTTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAATACCCCCCAAAAGACAGAAGTACAACTGCTTGTCTTCCTTTACA  100

seq1  CAAAATTGGGAGAAGAGGGGAGCTTCCTAAGGTGTTTGGGCCTGCAGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTGGGAGAAGAGGGGAGCTTCCTAAGGTGTTTGGGCCTGCAGTTG  150

seq1  ACTCCGTCAGTTTGAGGAGAGAGAACCATGTTGTAGAATATAAACAACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCGTCAGTTTGAGGAGAGAGAACCATGTTGTAGAATATAAACAACTA  200

seq1  AGAACTGATTTCTTGGTGTCTCTGTTGTTAGAAGTGCTTTCACTGTTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGATTTCTTGGTGTCTCTGTTGTTAGAAGTGCTTTCACTGTTTTA  250

seq1  AAATCACACAGCAGTATTCTTTCAAGTCACCCTGGAATACTTTTGTACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACACAGCAGTATTCTTTCAAGTCACCCTGGAATACTTTTGTACTT  300

seq1  TTCTGGTTCTCGTGTCTCTGATTATTTTCAAAAGAGGAAATATTTTTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTTCTCGTGTCTCTGATTATTTTCAAAAGAGGAAATATTTTTATT  350

seq1  CTTCTGGAGTTTTTAAATATCTTAGTTTGTTTAAAATGTTTTCAGTGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGAGTTTTTAAATATCTTAGTTTGTTTAAAATGTTTTCAGTGTTC  400

seq1  CTTTACAAAAGAAGAAAAAAAAAACCTTTATATATGTTAAATTTGCCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACAAAAGAAGAAAAAAAAAACCTTTATATATGTTAAATTTGCCTTA  450

seq1  ACTTTAACCATTTTCATATCCATGTCAGATTTCTAAGTTTTAAAACCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAACCATTTTCATATCCATGTCAGATTTCTAAGTTTTAAAACCAAA  500

seq1  ACAGTTATCTGTCAAAGAGTATCCTTACCTACTCCAGCCTGCTGAGTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTATCTGTCAAAGAGTATCCTTACCTACTCCAGCCTGCTGAGTAAG  550

seq1  AGTACATAATGAGTCTTGAGTTCCAGTGACACTCAGCTGCACTGAGGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACATAATGAGTCTTGAGTTCCAGTGACACTCAGCTGCACTGAGGTCC  600

seq1  AGGGAGAGCCCTACTCCTTCTAGCATTGCATGGAGTGCTTCTCAGACAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGAGCCCTACTCCTTCTAGCATTGCATGGAGTGCTTCTCAGACAGG  650

seq1  AAAGAACATATATGGTGAAAAGTAGAAACTTTTGAGTCAGAGCTTAGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACATATATGGTGAAAAGTAGAAACTTTTGAGTCAGAGCTTAGCAA  700

seq1  AAATCAAAGCAGAGAAATTAAAACAAAACACAACACAACAAAACGAAACG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAAAGCAGAGAAATTAAAACAAAACACAACACAACAAAACGAAACG  750

seq1  AAACAAAACGAAACAAAAGAAAACGAAACGCCACTTCCAGGAACATCTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACGAAACAAAAGAAAACGAAACGCCACTTCCAGGAACATCTAC  800

seq1  TTTGCCATAGGAAAGACCCTGACCATGTGAGCTGATATGCATTCTTTGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCATAGGAAAGACCCTGACCATGTGAGCTGATATGCATTCTTTGAT  850

seq1  TGGCTGAGAGTCTTACATTTGCTTAC-TTTTTTTTTGTTAATCCATTCCC  899
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGGCTGAGAGTCTTACATTTGCTTACTTTTTTTTTTGTTAATCCATTCCC  900

seq1  -AAGGACTACCTTTTTCCTAGAGATTTTAGCCACTT-GGTCACTGATAAT  947
       ||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAAGGACTACCTTTTTCCTAGAGATTTTAGCCACTTGGGTCACTGATAAT  950

seq1  AACATCTGCTTATACTCTAGATTTATTCTCCTTTTTAATTTATCTACTGC  997
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AACATCTGCTTATACTCTAGATTTATTCTCCTTTTTAA-TTATCTACTGC  999

seq1  TGATTTGATA-GGATTGCAAAAAGAAACAAAG-AGAAATGTTTCATTTTG  1045
      |||||||||| ||||||| ||||||||||||| |||||||||||||||||
seq2  TGATTTGATAGGGATTGC-AAAAGAAACAAAGAAGAAATGTTTCATTTTG  1048

seq1  AAGCAG-ACCCTA-GTCCGTAAATTACAAA  1073
       ||||| |||||| |||||  |||||||||
seq2  -AGCAGAACCCTAGGTCCGGTAATTACAAA  1077