BAC Information

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BAC

Clone NameB6Ng01-310I05
Chromosome12 (Build37)
Map Location 30,676,286 - 30,677,384
singlet/doubletsinglet
Overlap genePxdn
Upstream gene4833405L11Rik, LOC629608, Myt1l, LOC100043496
Downstream geneTpo, Sntg2, Tmem18, LOC100043055, Acp1, Sh3yl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310I05.bB6Ng01-310I05.g
ACCGA102469GA102470
length1,1041,182
definitionB6Ng01-310I05.b B6Ng01-310I05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccaagtaggctaggctaactgactaggaagcttcatgtgtcca
catccctcccccaccccccaggaccaagcccagctttgttttatgtgatt
tctaggggctaagccatctttccaacactgccttgccttttgaaatctgt
aagagccactctgtttgacctattatacatgatttggtggttagacagct
ttctttaggaaaataggactttgaggttgttcatagcatccaggtactca
catcggtgaatgtggacatgaatgtggacgttggaagtgaatcggtgtgt
atatggtgcagtcagctctgggtgcatcctgaggtcacagtggtagctag
acagtgtgtaccccttgcattctgctttgaatgtctactgacatcacagt
agtatgttacagaacactgccaggcgcaccttgctaacaagccagtgtga
acaccttgtgtgcagctgcgactctccttagactacaatggcaagtgtac
cctgcacacagatgtgaaggcactctttagccagagtggtcttaagtcag
catgcataccatgcacacagctgtgagtgtaccctgaggtcacagtggta
tcgagtcagtgtgttcaccatgcagtgtttaaaacagaacactgggagga
gtctttgtttctaattccttaactgaccttaggtgagcttctttatttcc
aggtaagttatgaaacagggcatgtgttgggaccctctcagaagcacggc
tgtgactctctcctcagtggcctcgtgtctctctagcagtttcctgtgca
tcagtctttcccatttccatgctacacacagctgtgcagtcatgggcggt
aggtttgcctctctgtatggtttctttatacaggccctgatgactgtcct
gtggcatgctcttaacttattcagtagccttactccagtcagttgcacaa
aagcactagtgacatgcttagccacctgcatgttgtgactagtagtgagt
tagactctcccttcagctccccttgcagcacaactgtgttgagtgctctt
ctgtgtcctgcctctgtgtaagctctgagggagcactggtttgggggtgg
tttt

gaattcaggctacagctcatgtatcccgatgactgctggtcctgatgata
tctatggaagtaggatatagtgtgatttatgatttagaactccttgaaga
ctcccatgaggcacagtgttcctggaagttggttaaagattttaggagat
ctcatcacaaaaatcccagaatttgagtagagttccttagaacagaatat
gaggagacaatgtgtcctatcaatttttatgttaacttgacactagataa
agtaatctgagaagaggaagccccaactaagaaaatgtctctgtaagata
ctgctgtaggcaagcctgcagcagcaacctcttcatggcctctgcatcag
tttctgcctccaggtttcagccctgcttgaattcctatcctgacttcctt
cagtgatgaactatggcatccaagtgtaagccaaataagccaagttgctt
ttggtcatggtatgtcatcacagcagtactaacttaactagtacagaagt
aggtaccaggataatgaggtattgctatgatagacctgaccatattttgt
ggaaggactttggtagtttgggctagaagatacattgagtgtggagagct
cagcgagctgttttgttggagctttgaggataagagtagtacagaaaatg
aaggcctgacttgtgaagttgcagaggaaagccagggctctactaagcca
ttttgtgtgaagaacctatagtttctggtcaacaggagctgaagaatcag
ctgagcttaacgggaggccagaaccactaaagtaaaacctttgacttact
gagacaattgatgctggtcagctggagattagaaattcatggtgatcgag
accagcatcattgaggtggagtctggaaagtattttctgagaatcagcac
agggaagctgcgttccagaggtagctcaagctgacagctgatcttgttag
tgtaagagtcacccaggtggtacagcttttgggtttgagagcatgaagtg
gtcatggagaacagctgagctttgcactgcacagccagaagagactctgg
taagtgtaaagatgcagctcgtagcagttgaagctgaggaatgaggagtt
cacacagagaagctgaaggccatgagttagctaggcaaaggcctattggt
gagttcacttcagaattttggggagaatggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_30676286_30677384
seq2: B6Ng01-310I05.b_45_1148

seq1  GAATTCACCAAGTAGGCTAGGCTAACTGACTAGGAAGCTTCATGTGTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCAAGTAGGCTAGGCTAACTGACTAGGAAGCTTCATGTGTCCA  50

seq1  CATCCCTCCCCCACCCCCCAGGACCAAGCCCAGCTTTGTTTTATGTGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCTCCCCCACCCCCCAGGACCAAGCCCAGCTTTGTTTTATGTGATT  100

seq1  TCTAGGGGCTAAGCCATCTTTCCAACACTGCCTTGCCTTTTGAAATCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGGGCTAAGCCATCTTTCCAACACTGCCTTGCCTTTTGAAATCTGT  150

seq1  AAGAGCCACTCTGTTTGACCTATTATACATGATTTGGTGGTTAGACAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCCACTCTGTTTGACCTATTATACATGATTTGGTGGTTAGACAGCT  200

seq1  TTCTTTAGGAAAATAGGACTTTGAGGTTGTTCATAGCATCCAGGTACTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTAGGAAAATAGGACTTTGAGGTTGTTCATAGCATCCAGGTACTCA  250

seq1  CATCGGTGAATGTGGACATGAATGTGGACGTTGGAAGTGAATCGGTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGGTGAATGTGGACATGAATGTGGACGTTGGAAGTGAATCGGTGTGT  300

seq1  ATATGGTGCAGTCAGCTCTGGGTGCATCCTGAGGTCACAGTGGTAGCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGTGCAGTCAGCTCTGGGTGCATCCTGAGGTCACAGTGGTAGCTAG  350

seq1  ACAGTGTGTACCCCTTGCATTCTGCTTTGAATGTCTACTGACATCACAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTGTACCCCTTGCATTCTGCTTTGAATGTCTACTGACATCACAGT  400

seq1  AGTATGTTACAGAACACTGCCAGGCGCACCTTGCTAACAAGCCAGTGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGTTACAGAACACTGCCAGGCGCACCTTGCTAACAAGCCAGTGTGA  450

seq1  ACACCTTGTGTGCAGCTGCGACTCTCCTTAGACTACAATGGCAAGTGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTTGTGTGCAGCTGCGACTCTCCTTAGACTACAATGGCAAGTGTAC  500

seq1  CCTGCACACAGATGTGAAGGCACTCTTTAGCCAGAGTGGTCTTAAGTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCACACAGATGTGAAGGCACTCTTTAGCCAGAGTGGTCTTAAGTCAG  550

seq1  CATGCATACCATGCACACAGCTGTGAGTGTACCCTGAGGTCACAGTGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATACCATGCACACAGCTGTGAGTGTACCCTGAGGTCACAGTGGTA  600

seq1  TCGAGTCAGTGTGTTCACCATGCAGTGTTTAAAACAGAACACTGGGAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGTCAGTGTGTTCACCATGCAGTGTTTAAAACAGAACACTGGGAGGA  650

seq1  GTCTTTGTTTCTAATTCCTTAACTGACCTTAGGTGAGCTTCTTTATTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTGTTTCTAATTCCTTAACTGACCTTAGGTGAGCTTCTTTATTTCC  700

seq1  AGGTAAGTTATGAAACAGGGCATGTGTTGGGACCCTCTCAGAAGCACGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAGTTATGAAACAGGGCATGTGTTGGGACCCTCTCAGAAGCACGGC  750

seq1  TGTGACTCTCTCCTCAGTGGCCTCGTGTCTCTCTAGCAGTTTCCTGTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTCTCTCCTCAGTGGCCTCGTGTCTCTCTAGCAGTTTCCTGTGCA  800

seq1  TCAGTCTTTCCCATTTCCATGCTACACACAGCTGTGCAGTCATGGGCGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTTTCCCATTTCCATGCTACACACAGCTGTGCAGTCATGGGCGGT  850

seq1  AGGTTTGCCTCTCTGTATGGTTTCTTTATACAGGCCCTGATGACTGTCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTGCCTCTCTGTATGGTTTCTTTATACAGGCCCTGATGACTGTCCT  900

seq1  GTGGCATGCTCTTAAC-TATTCAGTAGGCCTTACTCCAGTCAGTTGCACA  949
      |||||||||||||||| ||||||||| |||||||||||||||||||||||
seq2  GTGGCATGCTCTTAACTTATTCAGTA-GCCTTACTCCAGTCAGTTGCACA  949

seq1  AAAGCACTAGGTGACATGCTTAGCCACCTGCATGTTGTGACTAGTAGTGA  999
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACTA-GTGACATGCTTAGCCACCTGCATGTTGTGACTAGTAGTGA  998

seq1  GTTAGACCTCTCCCTTCAGCTCCCC-TGCAGCAC-ACTGTG-TGAGTGCT  1046
      |||||| |||||||||||||||||| |||||||| |||||| ||||||||
seq2  GTTAGA-CTCTCCCTTCAGCTCCCCTTGCAGCACAACTGTGTTGAGTGCT  1047

seq1  CTTCTGTGTCCTG-CTCTGTGT-AGCTCTGAGGGAGCACTGGTT--GGGG  1092
      ||||||||||||| |||||||| |||||||||||||||||||||  ||||
seq2  CTTCTGTGTCCTGCCTCTGTGTAAGCTCTGAGGGAGCACTGGTTTGGGGG  1097

seq1  TGGTTTT  1099
      |||||||
seq2  TGGTTTT  1104


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