BAC Information

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BAC

Clone NameB6Ng01-310K10
Chromosome12 (Build37)
Map Location 43,528,234 - 43,529,400
singlet/doubletsinglet
Overlap genenone
Upstream geneImmp2l, EG638533
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310K10.bB6Ng01-310K10.g
ACCGA102571GA102572
length1,1591,139
definitionB6Ng01-310K10.b B6Ng01-310K10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcctactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatctatttttgcagatgatat
ggtagtatatataagtgacccttaaaattccaccagagaactcctaaacc
tgataaacagcttcagtgaagtagctggatataaaattaactcaaacaag
ccaatggcatttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacactcttctcaatagtcacaaataatataaaatatctcggcg
tgactctaactaaggaagtgacagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatgaattggcagaatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aaggaattagaagaagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctcaggtggaatca
ccatgcctgacctaaagctttactacagagcgattgtgattaaaaaaaaa
aaaaaaaaaaaaaactgcatggtactggtatagagacagacaagtagacc
aatggaatagaattgaagacccagaaatgaacccacacacctatggtcac
ttgatcttcgacaaggagctaaaaccatccagtggaagaaagacagcatt
ttcacattggtgctgcacactggttgtatcgtgtagagatgcgatcgatc
catactatctctgtactagtcaaatctagttgatcagaacctcacataaa
cagagaacctgactatagaaagtgggaaggctgagaattggccaatgcta
agtcctgacagacgcatgctgacgtggaatcgcaatcgcacatgcactaa
tgaactcaa

gaattcctataacaaagggtattctgtagctttagtaaattaatggtctt
gtagagaataaaaaagaataaaaggttcaatagtcttttgctatcagtgc
acacagtcctattttctcttgatgttcttttatccatgtaaattccagta
aattattgttcacatacaaaggaagggtagctgcaaaaggcttttgcttg
gttctgcataatggtgcttccttttaccgatgagagactcctgtaaggat
tagttacttcctggatagtgagcattttgcttttttgtctttcaggaagt
agtttgaacttgctattctgtgggatttcattcaaacagggatgtgttgg
atgaaagctgacagttacggtctgtgatcttggcttcccttgtacactgt
gcccttcacactgaagagctgcttctgaccctctgtggaagaacccatac
tgagactcagccaagccactgacctttgagaaggcaaattgagggtgttc
tactttaataagctcttactgaaagaagcctggcagggccagatgaatag
tctaggtaggctccagctgtttagcgcacacaatgctagcacaccagttt
agataatatacttttgttatagttgaaactctgtcttccataatggaaaa
tataaattgtaaaggacaaagcgacataagcaagggaaactttcttttgt
ctgttgcagtgggaaagggagattgagctcagctcagcagacacagagga
tgggagggtgttaagcatggggtgagctactggtagagtactcatgagtg
ttagggttaaatgtgacggtagaaaggtgtccagcacagagttagatgtg
aaattgtaaatacttttctttgtagttaggccaaatatgcttgctcacta
gtactcaagaaattaagctccaactcccctatagaggctggaagatacgt
accatctcatttgatgaacacatttcaagatgtagtctggaaaatgacat
tgggggtgtaaattggttttgatatacaagtaatttcatacgagtgatga
caacctgtacttaaggtaagaacagatctagttaatcaattgaaggagct
actttttttccgtcagcaataaatgaatgcttgcttgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_43528234_43529400
seq2: B6Ng01-310K10.g_66_1204

seq1  GAATTCCTATAACAAAGGGTATTCTGTAGCTTTAGTAAATTAATGGTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATAACAAAGGGTATTCTGTAGCTTTAGTAAATTAATGGTCTT  50

seq1  GTAGAGAATAAAAAAGAATAAAAGGTTCAATAGTCTTTTGCTATCAGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGAATAAAAAAGAATAAAAGGTTCAATAGTCTTTTGCTATCAGTGC  100

seq1  ACACAGTCCTATTTTCTCTTGATGTTCTTTTATCCATGTAAATTCCAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTCCTATTTTCTCTTGATGTTCTTTTATCCATGTAAATTCCAGTA  150

seq1  AATTATTGTTCACATACAAAGGAAGGGTAGCTGCAAAAGGCTTTTGCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTGTTCACATACAAAGGAAGGGTAGCTGCAAAAGGCTTTTGCTTG  200

seq1  GTTCTGCATAATGGTGCTTCCTTTTACCGATGAGAGACTCCTGTAAGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGCATAATGGTGCTTCCTTTTACCGATGAGAGACTCCTGTAAGGAT  250

seq1  TAGTTACTTCCTGGATAGTGAGCATTTTGCTTTTTTGTCTTTCAGGAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTACTTCCTGGATAGTGAGCATTTTGCTTTTTTGTCTTTCAGGAAGT  300

seq1  AGTTTGAACTTGCTATTCTGTGGGATTTCATTCAAACAGGGATGTGTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGAACTTGCTATTCTGTGGGATTTCATTCAAACAGGGATGTGTTGG  350

seq1  ATGAAAGCTGACAGTTACGGTCTGTGATCTTGGCTTCCCTTGTACACTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGCTGACAGTTACGGTCTGTGATCTTGGCTTCCCTTGTACACTGT  400

seq1  GCCCTTCACACTGAAGAGCTGCTTCTGACCCTCTGTGGAAGAACCCATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTCACACTGAAGAGCTGCTTCTGACCCTCTGTGGAAGAACCCATAC  450

seq1  TGAGACTCAGCCAAGCCACTGACCTTTGAGAAGGCAAATTGAGGGTGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTCAGCCAAGCCACTGACCTTTGAGAAGGCAAATTGAGGGTGTTC  500

seq1  TACTTTAATAAGCTCTTACTGAAAGAAGCCTGGCAGGGCCAGATGAATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTAATAAGCTCTTACTGAAAGAAGCCTGGCAGGGCCAGATGAATAG  550

seq1  TCTAGGTAGGCTCCAGCTGTTTAGCGCACACAATGCTAGCACACCAGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGTAGGCTCCAGCTGTTTAGCGCACACAATGCTAGCACACCAGTTT  600

seq1  AGATAATATACTTTTGTTATAGTTGAAACTCTGTCTTCCATAATGGAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATATACTTTTGTTATAGTTGAAACTCTGTCTTCCATAATGGAAAA  650

seq1  TATAAATTGTAAAGGACAAAGCGACATAAGCAAGGGAAACTTTCTTTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATTGTAAAGGACAAAGCGACATAAGCAAGGGAAACTTTCTTTTGT  700

seq1  CTGTTGCAGTGGGAAAGGGAGATTGAGCTCAGCTCAGCAGACACAGAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGCAGTGGGAAAGGGAGATTGAGCTCAGCTCAGCAGACACAGAGGA  750

seq1  TGGGAGGGTGTTAAGCATGGGGTGAGCTACTGGTAGAGTACTCATGAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGGTGTTAAGCATGGGGTGAGCTACTGGTAGAGTACTCATGAGTG  800

seq1  TTAGGGTTAAATGTGACGGTAG-AAGGTGTCCAGCACAGAGTTAGATGTG  849
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTAGGGTTAAATGTGACGGTAGAAAGGTGTCCAGCACAGAGTTAGATGTG  850

seq1  AAATTGTAAATACTTTTCTTTGTAGTTAGGCCAAATATGCTTGCTCACTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTAAATACTTTTCTTTGTAGTTAGGCCAAATATGCTTGCTCACTA  900

seq1  GTACTCAAGAAATTAAGCTCCAACTCCCCTATAGAGGCTGGAAGATAACG  949
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GTACTCAAGAAATTAAGCTCCAACTCCCCTATAGAGGCTGGAAGAT-ACG  949

seq1  TACCATCTCAATTGATGAACACATTTCAAAGATGTAGTTCTGGAAAAATG  999
      |||||||||| |||||||||||||||| ||||||||| ||||| ||||||
seq2  TACCATCTCATTTGATGAACACATTTC-AAGATGTAG-TCTGG-AAAATG  996

seq1  ACATTGGGGGTGTAAAATTGGTTTTGAATATTACAAAGGTTATTTCAATA  1049
      ||||||||||||| |||||||||||| ||| |||||  || ||||| |||
seq2  ACATTGGGGGTGT-AAATTGGTTTTG-ATA-TACAA--GTAATTTC-ATA  1040

seq1  AACCGGAAGTGAGTGACAAACTTGTTACTAGAGTAAAGAACAAGATCTAA  1099
         ||  ||||| |||||| ||   ||||  ||  |||||| ||||||| 
seq2  ---CG--AGTGA-TGACAACCT--GTACTTAAGGTAAGAAC-AGATCTA-  1080

seq1  GTTTAATCAAATTGAGGGAGCTTTAACTCTTTTTTTTCTGTCAGCAATAA  1149
        |||||| |||||| ||||||   ||   |||||||| |||||||||||
seq2  -GTTAATC-AATTGAAGGAGCT---AC---TTTTTTTCCGTCAGCAATAA  1122

seq1  ATATGATTCTTGCTTGGA  1167
      ||   || ||||||||||
seq2  AT-GAATGCTTGCTTGGA  1139


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