BAC Information

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BAC

Clone NameB6Ng01-311F15
Chromosome4 (Build37)12 (Build37)
Map Location 22,921,677 - 22,922,149113,226,615 - 113,226,850
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040379, Fbxl4, Pou3f2, LOC664911, 1700025O08Rik
Downstream geneLOC625462, LOC383998, LOC100040464, LOC623873
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-311F15.bB6Ng01-311F15.g
ACCGA103090GA103091
length468946
definitionB6Ng01-311F15.b B6Ng01-311F15.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(22,921,677 - 22,922,149)(113,226,615 - 113,226,850)
sequence
aaggacagttttggagatttctttttggtttcatgtttctttgtttgagc
ttttctttcccatggaaatcttttgcttatctattactatttccaattta
gagttattttgtgggatggggcagggaggttgtgtgtatatgtgtgtggc
atttgacaagtaaactataattaatatcaagtttagatgttcatgtaaga
gaaagaggaaatcaatttaacaggatgggattcatgaaaatactgcagga
cagtagtccggaatctagctacactttgagtaaatctttacaaattgccc
agttaacatttttatcattgtaaatgacttctttattttttaagattaca
aattaatcaaatcacttcctctctcctttctcagtccaaaccttttcata
tattcctccttactttctttcaattccatgaacaatggggttttcattaa
ttactattatgtgcacac
gaattccaaacacactgcacaagaaaagaaagtcttcctgtcacataata
actaaaacactaaatgcacaaccaaagaaagaatattaaaagcagtaagg
gagcctggcatggtggcgcacgcctttaatcccagcacttgggaggcaga
ggaaggtggatctctgagttcgaggccagcctggtctacaaagtgagttc
caggacagccaggactgcacagagaaaccctgtctcgaaaaaccaaaaaa
caaaaaacaaaaaaaaacaaaaaaacaaaacaaaacaaaaaaaaacaaac
aacaacaacaaaaaaaaaaacaaaaaaagcagtaagggtaaaaggtcagt
taacatataaaggcaggcttatcagaattacagcagatttctcaccagag
acaatgaaagttagaagatcctgggcagatgtcatacagaccctaagaga
gcacaaatgcaagcccaggctactatacccagcaaaactctcaatcacca
tagatggagaaaccaaagtattccatgacaaaaccaaatttacacaatat
atttccataaatccagttctacagaggctaatagatggaaaacaccaaca
taaggtgggaaactacatcctagaaaaaagcaagaaagtaatctctcaac
aaaccccaaagaagatagccacacaaacataattccacctctaacaacaa
aaataacggcaacaatcacttttccttattatctctttacatcaatggac
tcaactccccaataaaaaaatcatagactggatatgtaaacaggaccccg
catcttgccgcatacaggaaacctacctcagtgacaaagacagacactac
ctcagaataaaaggttagaaaacaattttcctagcaaatggtcccaagaa
ctagatggaatagccattctatataaatcactagcaccaaaagtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_22921677_22922149
seq2: B6Ng01-311F15.b_42_515

seq1  GAATTCAAGGACAGTTTTGGAGATTTCTTTTTGGTTTCATGTTTCTTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGACAGTTTTGGAGATTTCTTTTTGGTTTCATGTTTCTTTGT  50

seq1  TTGAGCTTTTCTTTCCCATGGAAATCTTTTGCTTATCTATTACTATTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTTTTCTTTCCCATGGAAATCTTTTGCTTATCTATTACTATTTCC  100

seq1  AATTTAGAGTTATTTTGTGGGATGGGGCAGGGAGGTTGTGTGTATATGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGAGTTATTTTGTGGGATGGGGCAGGGAGGTTGTGTGTATATGTG  150

seq1  TGTGGCATTTGACAAGTAAACTATAATTAATATCAAGTTTAGATGTTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCATTTGACAAGTAAACTATAATTAATATCAAGTTTAGATGTTCAT  200

seq1  GTAAGAGAAAGAGGAAATCAATTTAACAGGATGGGATTCATGAAAATACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAGAAAGAGGAAATCAATTTAACAGGATGGGATTCATGAAAATACT  250

seq1  GCAGGACAGTAGTCCGGAATCTAGCTACACTTTGAGTAAATCATTACAAA  300
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GCAGGACAGTAGTCCGGAATCTAGCTACACTTTGAGTAAATCTTTACAAA  300

seq1  TTGCCCAGTTAACATTTTTATCATTGTAAATGACTTCTTTATTTTTTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCAGTTAACATTTTTATCATTGTAAATGACTTCTTTATTTTTTAAG  350

seq1  ATTACAAATTAATCAAATCACTTCCTCTCTCCTTTCTCAGTCCAAACCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAAATTAATCAAATCACTTCCTCTCTCCTTTCTCAGTCCAAACCTT  400

seq1  TTCATATATTCCTCCTTACTTTCTTTCAATTCCATGAACAAT-GGGTTTT  449
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTCATATATTCCTCCTTACTTTCTTTCAATTCCATGAACAATGGGGTTTT  450

seq1  CATTAATTACTATTATGTGCACAC  473
      ||||||||||||||||||||||||
seq2  CATTAATTACTATTATGTGCACAC  474

seq1: chr12_113226615_113226850
seq2: B6Ng01-311F15.g_176_393

seq1  TGGTGGTGCACGCCTTTAATCCCAGCACTTGGGAGGCAGAGTCGGAGGCG  50
      |||||| |||||||||||||||||||||||||                  
seq2  TGGTGGCGCACGCCTTTAATCCCAGCACTTGG------------------  32

seq1  GAGGCAGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTC  100
            |||||||||| |||||||| ||||||||||||||||||||||||
seq2  ------GAGGCAGAGGAAGGTGGATCTCTGAGTTCGAGGCCAGCCTGGTC  76

seq1  TACAAAGTGGGTTCCAGTACAGCCAGGGCT--ACAGAGAAACCCTGTCTC  148
      ||||||||| ||||||| ||||||||| ||  ||||||||||||||||||
seq2  TACAAAGTGAGTTCCAGGACAGCCAGGACTGCACAGAGAAACCCTGTCTC  126

seq1  GAAAAACCAAAAACC---AAACAAAACAAAACAAAAAAACAACCCAAAAA  195
      ||||||||||||| |   |||||||| |||||||||||||||  ||||| 
seq2  GAAAAACCAAAAAACAAAAAACAAAAAAAAACAAAAAAACAAAACAAAAC  176

seq1  AACAAACAACAACCCCCCCCAA-AAAAAAGAGTTTAAAAAAA  236
      || ||| ||||| |  |  ||| |||||| |    |||||||
seq2  AAAAAAAAACAAACAACAACAACAAAAAAAAAAACAAAAAAA  218