BAC Information

Click to search

BAC

Clone NameB6Ng01-312K07
Chromosome12 (Build37)
Map Location 105,713,650 - 105,714,739
singlet/doubletsinglet
Overlap genenone
Upstream gene8430415E04Rik, Serpina10, Serpina6, Gm46, Serpina1f, EG435316, Serpina1b, Serpina1d, LOC667951, LOC628801, Serpina1a, LOC667954, Serpina1c, Serpina1e, Serpina11, Serpina9, Serpina12, Serpina4-ps1, Serpina5, Serpina3a, Serpina3b, Serpina3c, LOC435318, LOC628883, Serpina3f, LOC667997, Serpina3g, Serpina3h, EG628900, EG238395, Serpina3k, EG628916, Serpina3m, Serpina3n, Gsc
Downstream geneDicer1, Clmn, 4831426I19Rik, Snhg10, Glrx5, LOC100040301, Tcl1b2, Tcl1b1, Tcl1b5, Tcl1b3, Tcl1b4, Tcl1, LOC100040310, 2810011L19Rik, LOC100040339, EG668081, D430019H16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312K07.bB6Ng01-312K07.g
ACCGA104061GA104062
length1,0771,181
definitionB6Ng01-312K07.b B6Ng01-312K07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacactccgaatcaattcggagatgatgatggtaccagagtctt
caaaagaccccaaacagcagatataccttatgcacgtggaatccactgat
ctggtctttaatagcttaaaaatgagggctattactgggacaagtgagtc
ccccaacaaacacattttcatagacttctgcgtggtgattgctttgtgtg
aaatcgtgtttgtgtgataatagagaaaatcaactgcgtgtttacttatt
tctcaccgaagcctcgctggctgcctccggactcgctggttctcccatgc
tgagctgggcatgcggggcgacaaacaatcgcttagcaactggaggggga
caatttgcgtgcctcgcatttgttatttcaattgcgcccggccattctgg
attgttcctagtgcgttggggacacttgtagggtttcctcagagaaagca
cagcgagggagctgggcccctgacttccttcacggagtccgcctcccagc
cgacaaagtagaacaaccttgggctgaggggacaattgtaccaggaaggc
tcagccacgccacgggtgagctctcccggagtgtagcggttaaacccatg
tagttgtgaggcttgggtccgggagcttctttctgggaaagtcttgtttt
caaggaaaagagccaagtgatttttctttatcttgaacccagctgaagag
accctgcttttgcctttgggcaggggtggggccaacacactcctttgtcc
cagtgaaaagaaaagaaaaaaactcattaaatactaaagttttaagggat
tcaattaatctcggatttggttagattatttaaaatcctgaggcctccaa
aggaggggtagtttgccaggtggcaatgttaggtcttgaaccctggcacc
cttgactacaggtgaacagcctcttcctctaggtcactgatatagctaca
gggctcgggaaatcgagccctgcagcgaaatcccggactgtaaactgatc
cactagtaccagctgaaagagacatggatggttggcggtgggtttgttat
tcttcaatcccactgctcttccaaatc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgattatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgctggacacatgctccactatgttcatagcagcct
tatttataatagccagaagctggaaagaacccagatgcccctcaacagag
gaatggatacagaaaatgtggtacatctacacaatggagtactactcagc
tattaaaaagaatgaatttatgaaattcctagccaaatggatggacctgg
agggcatcatcctgagtgaggtaacacattcacaaaggaactcacacaat
atgtactcactgataggtggatattagccccaaacctaggatacccaaga
tataagatacaatttgctaaacacatgaaactcaagaagaatgaagactg
aagtgtggacactatgcccctccttagaattggaaacaaaacacccatgg
aaggagttacagagacaaagtttggagctgagatgaaaggatggaccatt
tagggactgccatatccagggatccaccccataatcagcatccaaacgct
gacaccattgcacacactagcaagattttatcgaaaggacccagatgtag
ctgtctcttgtgagactatgccggggcctagcaaacacagaagtggatgc
tcacagtcagctaatggatggatcacaggctcccaatgggaggagctaga
gaaattacccaaggagctaaagggaactgcaaccctataggtgaacaaca
ttatgaactacccagtacccggagcctcttgactctagctgcatattgta
tcaaaagatgggcctagtcgtcatcactggaaagagagtcccactgacat
tgcaaactttatatggccccaagttacaggaatgcaaggtccatagcaag
tggtggggctaggggagtgtcgcttcacacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_105713650_105714739
seq2: B6Ng01-312K07.b_49_1125 (reverse)

seq1  GATTTGAAAGAGCAGTGGAATTTTGAAAAGAATAAAACAAACCCACGCCC  50
      |||||| ||||||||||| |||     ||||||  |||||||||||  ||
seq2  GATTTGGAAGAGCAGTGGGATT----GAAGAAT--AACAAACCCACCGCC  44

seq1  ACCCATTCATGTCTCTTTCAGCTTGGTACTTAGT-GATCAGTTTTAACAA  99
      | |||| ||||||||||||||| |||||| |||| |||||||||  || |
seq2  AACCATCCATGTCTCTTTCAGC-TGGTAC-TAGTGGATCAGTTT--AC-A  89

seq1  GTCCGGGATTTCGCTGCAGGGCTCGATTTCCCGAAGCCCTGTAGCTATAT  149
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GTCCGGGATTTCGCTGCAGGGCTCGATTTCCCG-AGCCCTGTAGCTATAT  138

seq1  CAGTGACCCTAGAAGGAAGAGGCTGTTCACCTGTAGTCAAGGGTGCCAGG  199
      |||||| ||||| |||||||||||||||||||||||||||||||||||||
seq2  CAGTGA-CCTAG-AGGAAGAGGCTGTTCACCTGTAGTCAAGGGTGCCAGG  186

seq1  GTTCAAGACCTAACATTGCCACCTGGCAAACTACCCCTCCTTTGGAGGCC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAGACCTAACATTGCCACCTGGCAAACTACCCCTCCTTTGGAGGCC  236

seq1  TCAGGATTTTAAATAATCTAACCAAATCCGAGATTAATTGAATCCCTTAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATTTTAAATAATCTAACCAAATCCGAGATTAATTGAATCCCTTAA  286

seq1  AACCTTAGTATTTAATGAGTTTTTTTCTTTTCTTTTCACTGGGACAAAGG  349
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTAGTATTTAATGAGTTTTTTTCTTTTCTTTTCACTGGGACAAAGG  336

seq1  AGTGTGTTGGCCCCACCCCTGCCCAAAGGCAAAAGCAGGGTCTCTTCAGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGTTGGCCCCACCCCTGCCCAAAGGCAAAAGCAGGGTCTCTTCAGC  386

seq1  TGGGTTCAAGATAAAGAAAAATCACTTGGCTCTTTTCCTTGAAAACAAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCAAGATAAAGAAAAATCACTTGGCTCTTTTCCTTGAAAACAAGA  436

seq1  CTTTCCCAGAAAGAAGCTCCCGGACCCAAGCCTCACAACTACATGGGTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCAGAAAGAAGCTCCCGGACCCAAGCCTCACAACTACATGGGTTT  486

seq1  AACCGCTACACTCCGGGAGAGCTCACCCGTGGCGTGGCTGAGCCTTCCTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGCTACACTCCGGGAGAGCTCACCCGTGGCGTGGCTGAGCCTTCCTG  536

seq1  GTACAATTGTCCCCTCAGCCCAAGGTTGTTCTACTTTGTCGGCTGGGAGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAATTGTCCCCTCAGCCCAAGGTTGTTCTACTTTGTCGGCTGGGAGG  586

seq1  CGGACTCCGTGAAGGAAGTCAGGGGCCCAGCTCCCTCGCTGTGCTTTCTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACTCCGTGAAGGAAGTCAGGGGCCCAGCTCCCTCGCTGTGCTTTCTC  636

seq1  TGAGGAAACCCTACAAGTGTCCCCAACGCACTAGGAACAATCCAGAATGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAAACCCTACAAGTGTCCCCAACGCACTAGGAACAATCCAGAATGG  686

seq1  CCGGGCGCAATTGAAATAACAAATGCGAGGCACGCAAATTGTCCCCCTCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGCGCAATTGAAATAACAAATGCGAGGCACGCAAATTGTCCCCCTCC  736

seq1  AGTTGCTAAGCGATTGTTTGTCGCCCCGCATGCCCAGCTCAGCATGGGAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCTAAGCGATTGTTTGTCGCCCCGCATGCCCAGCTCAGCATGGGAG  786

seq1  AACCAGCGAGTCCGGAGGCAGCCAGCGAGGCTTCGGTGAGAAATAAGTAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGCGAGTCCGGAGGCAGCCAGCGAGGCTTCGGTGAGAAATAAGTAA  836

seq1  ACACGCAGTTGATTTTCTCTATTATCACACAAACACGATTTCACACAAAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGCAGTTGATTTTCTCTATTATCACACAAACACGATTTCACACAAAG  886

seq1  CAATCACCACGCAGAAGTCTATGAAAATGTGTTTGTTGGGGGACTCACTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCACCACGCAGAAGTCTATGAAAATGTGTTTGTTGGGGGACTCACTT  936

seq1  GTCCCAGTAATAGCCCTCATTTTTAAGCTATTAAAGACCAGATCAGTGGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAGTAATAGCCCTCATTTTTAAGCTATTAAAGACCAGATCAGTGGA  986

seq1  TTCCACGTGCATAAGGTATATCTGCTGTTTGGGGTCTTTTGAAGACTCTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACGTGCATAAGGTATATCTGCTGTTTGGGGTCTTTTGAAGACTCTG  1036

seq1  GTACCATCATCATCTCCGAATTGATTCGGAGTGTTGAATTC  1090
      |||||||||||||||||||||||||||||||||||||||||
seq2  GTACCATCATCATCTCCGAATTGATTCGGAGTGTTGAATTC  1077