BAC Information

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BAC

Clone NameB6Ng01-313C16
Chromosome12 (Build37)
Map Location 50,672,313 - 50,673,169
singlet/doubletsinglet
Overlap genenone
Upstream geneGA_x5J8B7W54VK-284379-285078, Olfr1399-ps1, EG665036, LOC100039366, Foxg1, ENSMUSG00000045946, LOC100039424
Downstream geneLOC665071, LOC665077, LOC100039455, Prkcm
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313C16.bB6Ng01-313C16.g
ACCGA104455GA104456
length1,190857
definitionB6Ng01-313C16.b B6Ng01-313C16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagggaatctgggtggggacttgtagtgtggtctgctcagagct
tcaagccagtagcaaaattgttgctacatgtatctagcctataacttaat
atgtaaaccaagctagcctaagatttacagaaatctatttgcctctgctt
cctgaattctgggattaaaggcaaacatgaccaggtatggcaaaaaaact
taaaaaaaaataataaaaattttaaaaaaggtaagaaagactgggtttct
ggaaactgaagaaagacgtcttaccttaaatgtgggtaaaacattccaat
aataggaaaactggggaaatgcagaacatagttgatccctaagatgttca
gtctgtatttttcttgagaatgtttggcctttgtttctactagactagat
gagagattcacctctgagcaaggtatagtaacaataattctcaatgaagc
tttcagtccttaccacttggattatggctacttttgcctatcgttctcta
aatatagcagcctcttggtcttagtagctactcattaccacacctctata
cagcctgaattgcagaatatatatatatatatatgtgtgtgtgtgtgtgt
gtgtgtgcgtgtgtgttttataacctttatttccaggggtgtgaatgtac
ctaaaaactttaaagtataattttgacattacatatatgtataaagttat
gaaatattactttttaaaaattataggtatatttaaagatgaaactagga
aatgtaacagaaaaaaatctgagaaagaatatatactttcaaagataaaa
tttgaagtttcaagaacacctgtaactgcaggggcatgggggaacagttc
tcgtagacatagaaaaaaatggaacttctgattagaacagtgaattgcaa
aaatgtttaccaagtagaaagttactggcacccaaaggtggggcacagga
gtggagtctcctgctgttgtttgttttttctgggcactctctgggctttg
gaaataaactatcaggtgttaacatgtgcagaattatattccactcaatt
atatggcacagttctgtgcttccatagagcgtctacgcttatgcagcaag
aggtcatcatggtctagatacatgacatacttgacttcagcatactcagc
gaacctggtctggtacagtttcatcataagatgatcctga
gaattcctcctgctgagtgagattgaatttaattaaacagctgttgaata
cccccaaacatgcaagtgccacactgttgcaccatggtggacatcctaat
ggtccagtcattgtggttacaagctttgtacctatgtagggctatcagct
gctcccccctcttggcatcttggatagctccttttcactccatgagagct
agtcttcagggaggatgctttcaggtcaattttgtcttgattcctccaag
tactgtgctcaaagtgtatgatgtcttcagctatagaatctctttttccc
cattaattaatttatgtatttactttacatcctaatatcagcctcctctc
atcgcagtcctctctcatacagatcccttcatttcttcctccccttctac
aaggagaagggggaggtccttttgggttccaccctaccctgtcatatcaa
gtcattgtaggaccagccacatcctttcccactgaggcaagacaaggcag
cctagttagaggaaggagatccacaggcagccaacagattcagagacaac
ctgtgttccagtcagcaattggacgttagcccagactcaactgatacacc
tgaaatgcaaccgctataaataaggttcagggaaaatcacagaagataac
agaaaaattttaaggaacagaggccagggatgcctgatgacagatagtgt
cctccaaacatgaagggaaaagtcccatgaactctcttgtctctctctct
ctctgtctctctgtttctctctctctctcactctctctctctctctctct
ctctctctctctctccctctctctctctctctctctccctccctcgctcc
ctacttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_50672313_50673169
seq2: B6Ng01-313C16.g_66_922

seq1  GAATTCCTCCTGCTGAGTGAGATTGAATTTAATTAAACAGCTGTTGAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCTGCTGAGTGAGATTGAATTTAATTAAACAGCTGTTGAATA  50

seq1  CCCCCAAACATGCAAGTGCCACACTGTTGCACCATGGTGGACATCCTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAAACATGCAAGTGCCACACTGTTGCACCATGGTGGACATCCTAAT  100

seq1  GGTCCAGTCATTGTGGTTACAAGCTTTGTACCTATGTAGGGCTATCAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCAGTCATTGTGGTTACAAGCTTTGTACCTATGTAGGGCTATCAGCT  150

seq1  GCTCCCCCCTCTTGGCATCTTGGATAGCTCCTTTTCACTCCATGAGAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCCCCTCTTGGCATCTTGGATAGCTCCTTTTCACTCCATGAGAGCT  200

seq1  AGTCTTCAGGGAGGATGCTTTCAGGTCAATTTTGTCTTGATTCCTCCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCAGGGAGGATGCTTTCAGGTCAATTTTGTCTTGATTCCTCCAAG  250

seq1  TACTGTGCTCAAAGTGTATGATGTCTTCAGCTATAGAATCTCTTTTTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGCTCAAAGTGTATGATGTCTTCAGCTATAGAATCTCTTTTTCCC  300

seq1  CATTAATTAATTTATGTATTTACTTTACATCCTAATATCAGCCTCCTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATTAATTTATGTATTTACTTTACATCCTAATATCAGCCTCCTCTC  350

seq1  ATCGCAGTCCTCTCTCATACAGATCCCTTCATTTCTTCCTCCCCTTCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGCAGTCCTCTCTCATACAGATCCCTTCATTTCTTCCTCCCCTTCTAC  400

seq1  AAGGAGAAGGGGGAGGTCCTTTTGGGTTCCACCCTACCCTGTCATATCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAAGGGGGAGGTCCTTTTGGGTTCCACCCTACCCTGTCATATCAA  450

seq1  GTCATTGTAGGACCAGCCACATCCTTTCCCACTGAGGCAAGACAAGGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTGTAGGACCAGCCACATCCTTTCCCACTGAGGCAAGACAAGGCAG  500

seq1  CCTAGTTAGAGGAAGGAGATCCACAGGCAGCCAACAGATTCAGAGACAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTTAGAGGAAGGAGATCCACAGGCAGCCAACAGATTCAGAGACAAC  550

seq1  CTGTGTTCCAGTCAGCAATTGGACGTTAGCCCAGACTCAACTGATACACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTCCAGTCAGCAATTGGACGTTAGCCCAGACTCAACTGATACACC  600

seq1  TGAAATGCAACCGCTATAAATAAGGTTCAGGGAAAATCACAGAAGATAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGCAACCGCTATAAATAAGGTTCAGGGAAAATCACAGAAGATAAC  650

seq1  AGAAAAATTTTAAGGAACAGAGGCCAGGGATGCCTGATGACAGATAGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATTTTAAGGAACAGAGGCCAGGGATGCCTGATGACAGATAGTGT  700

seq1  CCTCCAAACATGAAGGGAAAAGTCCCATGAACTCTCTTGTCTCTCTCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAAACATGAAGGGAAAAGTCCCATGAACTCTCTTGTCTCTCTCTCT  750

seq1  CTCTGTCTCTCTGTTTCTCTCTCTCTCTCACTCTCTCTCTCTCTCTCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTCTCTGTTTCTCTCTCTCTCTCACTCTCTCTCTCTCTCTCTCT  800

seq1  CTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCCCTCCCTCCCTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCCCTCCCTCGCTCC  850

seq1  CTTCTTC  857
      || ||||
seq2  CTACTTC  857