BAC Information

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BAC

Clone NameB6Ng01-313D08
Chromosome12 (Build37)
Map Location 97,593,710 - 97,594,834
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667688, Flrt2, 1700019M22Rik, LOC100039664
Downstream geneEG628277
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313D08.bB6Ng01-313D08.g
ACCGA104486GA104487
length1,2221,110
definitionB6Ng01-313D08.b B6Ng01-313D08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccataactgaacataataagaggaatctacaacaattca
gtagtcaatatcaacgtaaatggagagaacctggaagaaatcccactaaa
atcagggagtagacaaggctgcccactttttccctacctattcaatttag
tacttaaagtcctagccagagcaattcgaccagaaaaggagataaagtgg
gtagaaattggaaaggaagaactgaaaatatcactatttggagatgatat
aattgtatatataagtgatcctaaaaatttgatcagaggactcctaaacc
tgataaacagcttcagtgcagtagctggatacaaaattaactcaaacaaa
tcagaggcttttctctacacataggataaactggatgagaaagaatttag
ggaaacaacacccttcacgttattcacaaaaatataaaatacgttgttgt
gactctaattaagtaagtgaaagatctttatgacaagaacttcaaatctc
tgaagaaagaaattgaagatctcagaagatggaaaaatctccgatggtca
tggattggcagaatcaatatagtcaaaatgactatccagcaaaagcaatt
tatagatttttttcttgaggttcttttaacttggatttatttttttaatt
aggtattttcctcatttacatttccaatgctatcccaaaagtcccccata
ccctcccccataccccattacccacccactcacaatttttggccctggca
ttcccctgcactggggcatataaagtttgaaagtccaatgggcatctctt
tccagtgatggcctactaggccatcttttgctacatatgctgctagagtc
aagagctcctgggtactggttagttcataatgttgttccacctatagagt
tgcagatccctttagctccttgggtactttctctagctcctacattgggg
gccctgtgattcatccaatagctgactgtgagcatcaacttatgttggtg
gcccctgcgtagttcttacttaaagactgcaattatcaggactatctgca
acattcttgctagtgtatgcatggtgtctgcgtttgagtctggatatatg
ggatggatcctgatatgggcagttcctagatgttcaactttttatccaca
ctccattttgctgtatctcttcatgtcgattattgttcgacattcttagt
agagtggctgaaggtatgcatc

gaattccaaaccagccagagatataggaagaaccctgcctcacaataaat
agattaatcaataagaagttagttcatacagagcagagctaaattaggtt
ctgaatagaatgttggtgaaaattaatttcaataaatttaaatttgtaag
acttacctactatttttattgtttaaatatattgtgttattattagaata
atcatagatgtgtttttatggtgatatcttctaaactgaatggtattttt
tcatatggagtattctttaaaatatgaattaccttgaggtaggagaaatg
gctcagtagttaagagtatttgctatcctaatagaggattgggtctgaga
gtccagcaccaacatagtgaattagtcatttggaacactagtcctagtgt
atcccatccttcacatgtactttatgccttatgtacttacatatacatgt
aagttaagctttatttaaaatattaataaatttacttgtgaatagcgagc
aatttaaatgtcatttatgcccaagacaatattccatgtttattcagcac
tactttatttattgcaataattcagcaagattttgaaatagactctaaat
agtaatttttgatgaaattttttttctttttttggttttttcgagacagg
gtttttttgtaaagccctggctgtcctggaactcactttgtagaccaggc
tggcctcgaactcagaaatctgcctgcctctgcctcccaagtgctgggat
taaaggcgtgcaccaccactgcccaccttgatgaaatttcttgactgaag
cttaacagtgatttcaataaaccaagcatcaatagacaagtgacccatat
tctcctgaatatttcaaaaattaaaacttaaagtgtatctaaatgtagga
tgtggatgcatgaagattacagaaggtagcagagggtagataaaggaggg
ctggatttgatagatgatgttttatatacacatggaaaatagcatagact
tccattactagctagtatacacctctaaataagataataaaaaaatcttg
tgtgtactatctaaatattcaatggtatactaaacagttgtgtagaaaaa
aaaatgacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_97593710_97594834
seq2: B6Ng01-313D08.g_63_1172

seq1  GAATTCCAAACCAGCCAGAGATATAGGAAGAACCCTGCCTCACAATAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAACCAGCCAGAGATATAGGAAGAACCCTGCCTCACAATAAAT  50

seq1  AGATTAATCAATAAGAAGTTAGTTCATACAGAGCAGAGCTAAATTAGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAATCAATAAGAAGTTAGTTCATACAGAGCAGAGCTAAATTAGGTT  100

seq1  CTGAATAGAATGTTGGTGAAAATTAATTTCAATAAATTTAAATTTGTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATAGAATGTTGGTGAAAATTAATTTCAATAAATTTAAATTTGTAAG  150

seq1  ACTTACCTACTATTTTTATTGTTTAAATATATTGTGTTATTATTAGAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACCTACTATTTTTATTGTTTAAATATATTGTGTTATTATTAGAATA  200

seq1  ATCATAGATGTGTTTTTATGGTGATATCTTCTAAACTGAATGGTATTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAGATGTGTTTTTATGGTGATATCTTCTAAACTGAATGGTATTTTT  250

seq1  TCATATGGAGTATTCTTTAAAATATGAATTACCTTGAGGTAGGAGAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATGGAGTATTCTTTAAAATATGAATTACCTTGAGGTAGGAGAAATG  300

seq1  GCTCAGTAGTTAAGAGTATTTGCTATCCTAATAGAGGATTGGGTCTGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGTAGTTAAGAGTATTTGCTATCCTAATAGAGGATTGGGTCTGAGA  350

seq1  GTCCAGCACCAACATAGTGAATTAGTCATTTGGAACACTAGTCCTAGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGCACCAACATAGTGAATTAGTCATTTGGAACACTAGTCCTAGTGT  400

seq1  ATCCCATCCTTCACATGTACTTTATGCCTTATGTACTTACATATACATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCATCCTTCACATGTACTTTATGCCTTATGTACTTACATATACATGT  450

seq1  AAGTTAAGCTTTATTTAAAATATTAATAAATTTACTTGTGAATAGCGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAAGCTTTATTTAAAATATTAATAAATTTACTTGTGAATAGCGAGC  500

seq1  AATTTAAATGTCATTTATGCCCAAGACAATATTCCATGTTTATTCAGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAATGTCATTTATGCCCAAGACAATATTCCATGTTTATTCAGCAC  550

seq1  TACTTTATTTATTGCAATAATTCAGCAAGATTTTGAAATAGACTCTAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTATTTATTGCAATAATTCAGCAAGATTTTGAAATAGACTCTAAAT  600

seq1  AGTAATTTTTGATGAAATTTTTTTTCTTTTTTTGGTTTTTTCGAGACAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTTTTGATGAAATTTTTTTTCTTTTTTTGGTTTTTTCGAGACAGG  650

seq1  GTTTTTTTGTAAAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTGTAAAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGC  700

seq1  TGGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGAT  750

seq1  TAAAGGCGTGCACCACCACTGCCCACCTTGATGAAATTTCTTGACTGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGCGTGCACCACCACTGCCCACCTTGATGAAATTTCTTGACTGAAG  800

seq1  CTTAACAGTGATTTCAATAAACCAAGCATCAATAGACAAGTGACCCATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACAGTGATTTCAATAAACCAAGCATCAATAGACAAGTGACCCATAT  850

seq1  TCTCCTGAATATTTCAAAAATTAAAACTTAAAGTGTATCTAAATGTAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGAATATTTCAAAAATTAAAACTTAAAGTGTATCTAAATGTAGGA  900

seq1  TGTGGATGCATGAAGATTACAGAAGGTAGCAGAGGGTAGATAAAGGAGGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGATGCATGAAGATTACAGAAGGTAGCAGAGGGTAGATAAAGGAGGG  950

seq1  CTGGATTTGAATAGATGATGTTTTATATACAACATGGAAAATAGCATAGA  1000
      ||||||||| |||||||||||||||||||| |||||||||||||||||||
seq2  CTGGATTTG-ATAGATGATGTTTTATATAC-ACATGGAAAATAGCATAGA  998

seq1  CTTCCATTACTAAGCTTAGTTAATACA-CTCTAAAATAAGAATTAATAAA  1049
      ||||||||||| ||| ||||  ||||| |||| ||||||||  |||||||
seq2  CTTCCATTACT-AGC-TAGT--ATACACCTCT-AAATAAGA--TAATAAA  1041

seq1  AAAAATCTGTGTGTACTATCCTAAATATTTCAATGGTAATACTAAAACCA  1099
      ||||   |||||||||||| ||||||| ||||||||| ||||||||  ||
seq2  AAAATCTTGTGTGTACTAT-CTAAATA-TTCAATGGT-ATACTAAA--CA  1086

seq1  G-TGTGTAGAAAAAAAAAAATTGACAG  1125
      | ||||||||||||||||   ||||||
seq2  GTTGTGTAGAAAAAAAAA---TGACAG  1110


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