BAC Information

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BAC

Clone NameB6Ng01-313P21
Chromosome12 (Build37)
Map Location 5,940,919 - 5,941,985
singlet/doubletsinglet
Overlap genenone
Upstream geneAtad2b, LOC668332, Klhl29, 2810032G03Rik, LOC435292, LOC100042095
Downstream geneLOC672098, LOC100043137, LOC238049, LOC100042118
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313P21.bB6Ng01-313P21.g
ACCGA105053GA105054
length1,1901,067
definitionB6Ng01-313P21.b B6Ng01-313P21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccattttttaatggggatatgtgatt
ttctggagcccaccttcttgagttctttatatatatattggattttagtc
ctctatctgatttaggataggtaaagatcctttcccaatctgttggtggt
ctttttgtcttgttgacagtgtcttttgttttgcagaagctttgcaactt
tatgaagtcccatttatcaattcttgatcttactgcacaagacattgctg
ttgtattcaggaagttttcccctgtacccatagcctcgatgcttttccct
actttctcctctataagttagtacaaggagataggaatggatcaatttgc
attcttctacatgataactgccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggttttagctcccttgtcaaagatcaaat
gaccgtaggtgtgtgggttcatctctgggtcttcaattctgttccattgt
tctacttgtctgtcactataccagtgccatgcagtttttatcacaattgc
tctgtagtacagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagcttttgctatactaggttttttgttattccagatg
aatctgcagattgctctttctaattcattgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttgtaagatagccatttt
tacaatgttgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttctttaatttctttcttcagagacttgaagttcttatcatac
agatctttcatttccttagttagagtcacaccaaggtattttatattatt
tgtgactattgagaagggtgttgtttccctaatttctttctcagcctgtt
tatacttctgtacagaaaggccattgacttgtttggctactcagcttgga
aattgttttccagcctttactctgagtagtgtctatctttatcctgagtg
gttttctgtattgcagcaaaatgttggatcttgttggttagccagttttt
tggctcaaggctttactacgatgagttcattgaatgtaagcattcagcag
gtaattgagttcctgcaatttagtgttaatgagtgggacc
gaattctgtgaaatgcgtatagaaacacctgctattgtcagaaaaaagcc
aaccttttgatggttgcatcttctaggcacagaggagagggacacactcc
tgggactcagcagtggtcatggtggggaggaagtgacgctgttgaatggg
tccagaaaggttcacagggctgatgtaggggaactagattctctgacttc
ttcctgaatcttcaaacactttctgcacagattcctaatgtatctcagat
gttctgtgtctgttttgccagctagtgccaaaacttatgaaatatctgag
atggtctggagggtgtagatacttccagaagtctcatctcagcttcgaca
gcaacctctcattcatcagcagagatcctcatgaatccttccctaaaagt
acccacaatcccttaccgcagacactccagggtatgcattgcctacccaa
aatcactcaaaatgaaggtcatgtctgcacactgcaccatctcccctgca
gagagtggccttgcagtgagggtgctcagggaatagttaaagagttttaa
gttcacatgcaaacacagtataatgacaggagaggtccttgggaaataag
atcagccttctattttctggacccattaggatgaaaagtaggaatcagtt
gaaaattattaatttacttttggcaagaaataaactggccaacaacagaa
agcttcaggctcagggagagatccagtctcaaggcaataaagcagggaga
aagagaaggacacacccaatatcctcctctagcctttaggagtttgtgca
cgggtacacaaacagatgtgccacacacacacacacagacacacacatgc
cccaagaaacaaaataggaatgcataacagtgtagttgtcaagtgatccc
cattttaaatattgggtaatagttgtgataatcactgaggctatttcagt
aaataccccccttatctgtagctttacttatcatggcttccttgcaaaca
actgtgacgtcccccttctctgtgttgtggagagttaagtaggccacagt
agtcaattttacaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_5940919_5941985
seq2: B6Ng01-313P21.g_67_1133 (reverse)

seq1  TCCCTGTAAAATTGACTTACCTGT-GCTTACCTTAACTCTCCAC-ACACA  48
      |||||||||||||||||   |||| || || ||||||||||||| |||||
seq2  TCCCTGTAAAATTGACT--ACTGTGGCCTA-CTTAACTCTCCACAACACA  47

seq1  GAG-AGGGGGACGTCACAG-TGTTTGCAAAGGAAGCCATTGATAAGTAAA  96
      ||| ||||||||||||||| ||||||| |||||||||| |||||||||||
seq2  GAGAAGGGGGACGTCACAGTTGTTTGC-AAGGAAGCCA-TGATAAGTAAA  95

seq1  GGCTACAGATAAGGGGGGTATTTACTGAAATAGCCTCAGTGATTATCACA  146
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -GCTACAGATAAGGGGGGTATTTACTGAAATAGCCTCAGTGATTATCACA  144

seq1  ACTATTA-CCAATATTTAAAATGGGGATCACTTGACAACTACACTGTTAT  195
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTACCCAATATTTAAAATGGGGATCACTTGACAACTACACTGTTAT  194

seq1  GCATTCCTA-TTTGTTTCTTGGGGCATGTGTGTGTCTGTGTGTGTGTGTG  244
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCCTATTTTGTTTCTTGGGGCATGTGTGTGTCTGTGTGTGTGTGTG  244

seq1  TGGCACATCTGTTTGTGTACCCGTGCACAAACTCCTAAAGGCTAGAGGAG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACATCTGTTTGTGTACCCGTGCACAAACTCCTAAAGGCTAGAGGAG  294

seq1  GATATTGGGTGTGTCCTTCTCTTTCTCCCTGCTTTATTGCCTTGAGACTG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTGGGTGTGTCCTTCTCTTTCTCCCTGCTTTATTGCCTTGAGACTG  344

seq1  GATCTCTCCCTGAGCCTGAAGCTTTCTGTTGTTGGCCAGTTTATTTCTTG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCTCCCTGAGCCTGAAGCTTTCTGTTGTTGGCCAGTTTATTTCTTG  394

seq1  CCAAAAGTAAATTAATAATTTTCAACTGATTCCTACTTTTCATCCTAATG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAGTAAATTAATAATTTTCAACTGATTCCTACTTTTCATCCTAATG  444

seq1  GGTCCAGAAAATAGAAGGCTGATCTTATTTCCCAAGGACCTCTCCTGTCA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCAGAAAATAGAAGGCTGATCTTATTTCCCAAGGACCTCTCCTGTCA  494

seq1  TTATACTGTGTTTGCATGTGAACTTAAAACTCTTTAACTATTCCCTGAGC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACTGTGTTTGCATGTGAACTTAAAACTCTTTAACTATTCCCTGAGC  544

seq1  ACCCTCACTGCAAGGCCACTCTCTGCAGGGGAGATGGTGCAGTGTGCAGA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCACTGCAAGGCCACTCTCTGCAGGGGAGATGGTGCAGTGTGCAGA  594

seq1  CATGACCTTCATTTTGAGTGATTTTGGGTAGGCAATGCATACCCTGGAGT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACCTTCATTTTGAGTGATTTTGGGTAGGCAATGCATACCCTGGAGT  644

seq1  GTCTGCGGTAAGGGATTGTGGGTACTTTTAGGGAAGGATTCATGAGGATC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCGGTAAGGGATTGTGGGTACTTTTAGGGAAGGATTCATGAGGATC  694

seq1  TCTGCTGATGAATGAGAGGTTGCTGTCGAAGCTGAGATGAGACTTCTGGA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGATGAATGAGAGGTTGCTGTCGAAGCTGAGATGAGACTTCTGGA  744

seq1  AGTATCTACACCCTCCAGACCATCTCAGATATTTCATAAGTTTTGGCACT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTACACCCTCCAGACCATCTCAGATATTTCATAAGTTTTGGCACT  794

seq1  AGCTGGCAAAACAGACACAGAACATCTGAGATACATTAGGAATCTGTGCA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGCAAAACAGACACAGAACATCTGAGATACATTAGGAATCTGTGCA  844

seq1  GAAAGTGTTTGAAGATTCAGGAAGAAGTCAGAGAATCTAGTTCCCCTACA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGTTTGAAGATTCAGGAAGAAGTCAGAGAATCTAGTTCCCCTACA  894

seq1  TCAGCCCTGTGAACCTTTCTGGACCCATTCAACAGCGTCACTTCCTCCCC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCCTGTGAACCTTTCTGGACCCATTCAACAGCGTCACTTCCTCCCC  944

seq1  ACCATGACCACTGCTGAGTCCCAGGAGTGTGTCCCTCTCCTCTGTGCCTA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGACCACTGCTGAGTCCCAGGAGTGTGTCCCTCTCCTCTGTGCCTA  994

seq1  GAAGATGCAACCATCAAAAGGTTGGCTTTTTTCTGACAATAGCAGGTGTT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGCAACCATCAAAAGGTTGGCTTTTTTCTGACAATAGCAGGTGTT  1044

seq1  TCTATACGCATTTCACAGAATTC  1067
      |||||||||||||||||||||||
seq2  TCTATACGCATTTCACAGAATTC  1067