MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-315D07
Chromosome	12 (Build37)
Map Location	78,820,962 - 78,959,304
singlet/doublet	doublet
Overlap gene	LOC666659
Upstream gene	Churc1, Gpx2, Rab15, Fntb, Max, LOC100041765, LOC100041772, Fut8, LOC230765
Downstream gene	EG626215, Gphn, 4921509E07Rik, Mpp5, Atp6v1d
Link	Open Mouse BAC browser

Click to get alignment info.

name	Churc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211151 MGI:1923684
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14776 MGI:106609
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rab15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104886 MGI:1916865
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fntb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110606 MGI:1861305
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Max (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17187 MGI:96921
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041765 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041765
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC100041772 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041772
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Fut8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53618 MGI:1858901
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC230765 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:230765
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 34 ESTs, 14 Proteins pseudo : _no_value

name	LOC666659 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666659
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 160 ESTs, 3 Proteins pseudo : _no_value

name	EG626215 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626215 MGI:3645257
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein

name	Gphn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268566 MGI:109602
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4921509E07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70897 MGI:1918147
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mpp5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56217 MGI:1927339
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp6v1d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73834 MGI:1921084
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Churc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124249114 GeneID:211151 MGI:1923684
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : churchill domain containing 1 transcript_id : NM_206534.1

name	Gpx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:17432428 GeneID:14776 MGI:106609
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutathione peroxidase 2 transcript_id : NM_030677.1

name	Rab15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348473 GeneID:104886 MGI:1916865
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB15, member RAS oncogene family transcript_id : NM_134050.3

name	Fntb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130233 GeneID:110606 MGI:1861305
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : farnesyltransferase, CAAX box, beta transcript_id : NM_145927.2

name	Max (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678815 GeneID:17187 MGI:96921
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Max protein transcript_id : NM_008558.1

name	LOC100041765 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263326 GeneID:100041765
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100041765 transcript_id : XM_001477144.1

name	LOC100041772 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263328 GeneID:100041772
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041772 transcript_id : XM_001477155.1

name	Fut8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386041 GeneID:53618 MGI:1858901
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fucosyltransferase 8 transcript_id : NM_016893.3

name	EG626215 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392976 GeneID:626215 MGI:3645257
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : predicted gene, EG626215 transcript_id : XM_890796.2

name	Gphn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350410 GeneID:268566 MGI:109602
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gephyrin transcript_id : NM_172952.2

name	4921509E07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802769 GeneID:70897 MGI:1918147
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4921509E07 gene transcript_id : NM_027597.3

name	Mpp5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9625022 GeneID:56217 MGI:1927339
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) transcript_id : NM_019579.1

name	Atp6v1d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:80861456 GeneID:73834 MGI:1921084
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, H+ transporting, lysosomal V1 subunit D transcript_id : NM_023721.2

name	Churc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249115 GeneID:211151 MGI:1923684
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0003677 - DNA binding [Evidence ISS]; GO:0016563 - transcriptional activator activity [Evidence IEA] [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0007498 - mesoderm development [Evidence ISS]; GO:0045941 - positive regulation of transcription [Evidence IEA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : churchill domain containing 1 protein_id : NP_996257.1

name	Gpx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17432429 CCDS:CCDS25996.1 GeneID:14776 MGI:106609
definition	GO_component : GO:0005829 - cytosol [Evidence TAS] GO_function : GO:0004602 - glutathione peroxidase activity [Evidence ISS] [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]; GO:0008430 - selenium binding [Evidence IEA] GO_process : GO:0006979 - response to oxidative stress [Evidence IEA] codon_start : 1 exception : mismatches in translation note : intestinal GPx product : glutathione peroxidase 2 protein_id : NP_109602.1 transl_except : (pos:complement(77896243..77896245),aa:Sec)

name	Rab15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559981 CCDS:CCDS25997.1 GeneID:104886 MGI:1916865
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008134 - transcription factor binding [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : RAB15, member RAS oncogene family protein_id : NP_598811.2

name	Fntb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122343 CCDS:CCDS25998.1 GeneID:110606 MGI:1861305
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004311 - farnesyltranstransferase activity [Evidence IMP]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004660 - protein farnesyltransferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008285 - negative regulation of cell proliferation [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP]; GO:0048146 - positive regulation of fibroblast proliferation [Evidence IMP]; GO:0042060 - wound healing [Evidence IMP] codon_start : 1 product : farnesyltransferase, CAAX box, beta protein_id : NP_666039.1

name	Max (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678816 GeneID:17187 MGI:96921
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : Max protein protein_id : NP_032584.1

name	LOC100041765 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263327 GeneID:100041765
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477194.1

name	LOC100041772 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263329 GeneID:100041772
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477205.1

name	Fut8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560444 CCDS:CCDS25999.1 GeneID:53618 MGI:1858901
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0046921 - alpha(1,6)-fucosyltransferase activity [Evidence IMP]; GO:0008424 - glycoprotein 6-alpha-L-fucosyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence ISS] [Evidence IEA] GO_process : GO:0043112 - receptor metabolism [Evidence IMP]; GO:0007585 - respiratory gaseous exchange [Evidence IMP]; GO:0007179 - transforming growth factor beta receptor signaling pathway [Evidence IMP] codon_start : 1 note : alpha-1,6-fucosyltransferase; alpha (1,6) fucosyltransferase product : fucosyltransferase 8 protein_id : NP_058589.2

name	EG626215 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94392977 GeneID:626215 MGI:3645257
definition	codon_start : 1 product : hypothetical protein protein_id : XP_895889.2

name	Gphn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370466 CCDS:CCDS26000.1 GeneID:268566 MGI:109602
definition	GO_component : GO:0019897 - extrinsic to plasma membrane [Evidence TAS] GO_function : GO:0008092 - cytoskeletal protein binding [Evidence TAS] GO_process : GO:0007529 - establishment of synaptic specificity at neuromuscular junction [Evidence IMP] codon_start : 1 exception : mismatches in translation product : gephyrin protein_id : NP_766540.1

name	4921509E07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31442418 GeneID:70897 MGI:1918147
definition	codon_start : 1 product : hypothetical protein LOC70897 protein_id : NP_081873.2

name	Mpp5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9625023 CCDS:CCDS26001.1 GeneID:56217 MGI:1927339
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0005923 - tight junction [Evidence IEA] GO_function : GO:0004385 - guanylate kinase activity [Evidence ISS]; GO:0005515 - protein binding [Evidence IEA] codon_start : 1 note : protein associated with Lin-7 product : membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 5) protein_id : NP_062525.1

name	Atp6v1d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963799 CCDS:CCDS26002.1 GeneID:73834 MGI:1921084
definition	GO_component : GO:0016469 - proton-transporting two-sector ATPase complex [Evidence IEA] GO_function : GO:0015078 - hydrogen ion transporter activity [Evidence IEA]; GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006754 - ATP biosynthesis [Evidence IEA]; GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0015992 - proton transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : ATPase, H+ transporting lysosomal (vacuolar proton pump); V-ATPase subunit D; lysosomal 34kDa; ATPase, H+ transporting, lysosomal 34kD, V1 subunit D product : ATPase, H+ transporting, V1 subunit D protein_id : NP_076210.1

name	LOC230765 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263310 GeneID:230765
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 34 ESTs, 14 Proteins product : similar to histone deacetylase pseudo : _no_value transcript_id : XR_032827.1

name	LOC666659 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263330 GeneID:666659
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 160 ESTs, 3 Proteins product : similar to brain protein 44-like pseudo : _no_value transcript_id : XR_033111.1

clone name	MSMg01-303L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444J16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-364O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289O24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-398L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379F05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-410O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303H01
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-315D07.b	B6Ng01-315D07.g
ACC	GA105915	GA105916
length	445	380
definition	B6Ng01-315D07.b	B6Ng01-315D07.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(78,958,854 - 78,959,304)	(78,820,962 - 78,821,347)
sequence	agaaggcgcagcaagtgctaactgctcacagggcacttggcctcacatag ctctgtgcattgtctaatctcattgctgctatatttcagctttgcaggga gtgtcttgggaatttcatgggtatgtgctatttatttgaccacactaccc agtgtcctgttctagacactgtggatactaatgatgctcactaaagcaga gaccccaatgatccaataccatcaaaaaagtccatcaactaaaaagaaat ttccaaataaccgtattttttttaacttgctattcttggtcagtttaaaa aggaatcgtagtctcagaaaacatttctctttttagaatcctttactctt ccattcatttttctcacatgttataaatactcgctcactactcttagcta ttcaaacaccaagctcatctgtctttcaaccatgttcagatccct	caccttcgagctcagagaactttaatttattaatacaattctcatccaag atatgatccttatcttatttcctaaagcccagtttttttttaaaacttga aattctgcaatagtccttggctacttttgttgtcatctgtctgtttcctc tcctcctttcttagttcctactattctatttcttgcagtgttaagtgctc tgctgcccaagtgcaggatggggtagagtcccttgcatgacaggagatgg gagaaagatgacccattaatatttcaaaggtattatgttaaatcatttat aggattaaattcactttttctttgaccccagaagccagcactcgctgctt agcattagtggggctgtggggggggggggg
quality values	Open. Hide. 37 43 62 62 62 49 47 47 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 56 62 54 56 54 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 42 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 54 54 54 59 62 62 62 62 62 62 62 49 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 49 62 62 62 62 62 54 54 62 62 62 62 62 62 54 62 62 62 62 59 62 62 59 62 59 59 59 62 59 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 59 59 54 49 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 49 49 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 52 58 58 58 58 11 12	Open. Hide. 59 34 62 59 56 48 49 28 42 42 62 62 59 59 56 54 59 59 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 59 62 62 59 62 62 59 62 54 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 42 49 49 54 62 62 62 62 62 56 54 54 59 62 62 54 62 59 62 62 62 62 56 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 54 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 43 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 41 13

Alignment Information

BAC End 1

BAC End 2

seq1: chr12_78958854_78959304
seq2: B6Ng01-315D07.b_45_495 (reverse)

seq1  AGGGATCTGAACATGGTTGAAAGACAGATGAGCTTGGTGTTTGAATAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATCTGAACATGGTTGAAAGACAGATGAGCTTGGTGTTTGAATAGCT  50

seq1  AAGAGTAGTGAGCGAGTATTTATAACATGTGAGAAAAATGAATGGAAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTAGTGAGCGAGTATTTATAACATGTGAGAAAAATGAATGGAAGAG  100

seq1  TAAAGGATTCTAAAAAGAGAAATGTTTTCTGAGACTACGATTCCTTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGATTCTAAAAAGAGAAATGTTTTCTGAGACTACGATTCCTTTTTA  150

seq1  AACTGACCAAGAATAGCAAGTTAAAAAAAATACGGTTATTTGGAAATTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGACCAAGAATAGCAAGTTAAAAAAAATACGGTTATTTGGAAATTTC  200

seq1  TTTTTAGTTGATGGACTTTTTTGATGGTATTGGATCATTGGGGTCTCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGTTGATGGACTTTTTTGATGGTATTGGATCATTGGGGTCTCTGC  250

seq1  TTTAGTGAGCATCATTAGTATCCACAGTGTCTAGAACAGGACACTGGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTGAGCATCATTAGTATCCACAGTGTCTAGAACAGGACACTGGGTA  300

seq1  GTGTGGTCAAATAAATAGCACATACCCATGAAATTCCCAAGACACTCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGTCAAATAAATAGCACATACCCATGAAATTCCCAAGACACTCCCT  350

seq1  GCAAAGCTGAAATATAGCAGCAATGAGATTAGACAATGCACAGAGCTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGCTGAAATATAGCAGCAATGAGATTAGACAATGCACAGAGCTATG  400

seq1  TGAGGCCAAGTGCCCTGTGAGCAGTTAGCACTTGCTGCGCCTTCTGAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCCAAGTGCCCTGTGAGCAGTTAGCACTTGCTGCGCCTTCTGAATT  450

seq1  C  451
      |
seq2  C  451

seq1: chr12_78820962_78821347
seq2: B6Ng01-315D07.g_64_449

seq1  GAATTCCACCTTCGAGCTCAGAGAACTTTAATTTATTAATACAATTCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCTTCGAGCTCAGAGAACTTTAATTTATTAATACAATTCTCA  50

seq1  TCCAAGATATGATCCTTATCTTATTTCCTAAAGCCCAGTTTTTTTTTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGATATGATCCTTATCTTATTTCCTAAAGCCCAGTTTTTTTTTAAA  100

seq1  ACTTGAAATTCTGCAATAGTCCTTGGCTACTTTTGTTGTCATCTGTCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAAATTCTGCAATAGTCCTTGGCTACTTTTGTTGTCATCTGTCTGT  150

seq1  TTCCTCTCCTCCTTTCTTAGTTCCTACTATTCTATTTCTTGCAGTGTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTCCTCCTTTCTTAGTTCCTACTATTCTATTTCTTGCAGTGTTAA  200

seq1  GTGCTCTGCTGCCCAAGTGCAGGATGGGGTAGAGTCCCTTGCATGACAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCTGCTGCCCAAGTGCAGGATGGGGTAGAGTCCCTTGCATGACAGG  250

seq1  AGATGGGAGAAAGATGACCCATTAATATTTCAAAGGTATTATGTTAAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGGAGAAAGATGACCCATTAATATTTCAAAGGTATTATGTTAAATC  300

seq1  ATTTATAGGATTAAATTCACTTTTTCTTTGACCCCAGAAGCCAGCACTCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAGGATTAAATTCACTTTTTCTTTGACCCCAGAAGCCAGCACTCG  350

seq1  CTGCTTAGCATTAGTGGGGCTGTGGGGGGGGGGGGG  386
      ||||||||||||||||||||||||||||||||||||
seq2  CTGCTTAGCATTAGTGGGGCTGTGGGGGGGGGGGGG  386

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information