BAC Information

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BAC

Clone NameB6Ng01-315D18
Chromosome12 (Build37)
Map Location 71,965,555 - 72,075,370
singlet/doubletdoublet
Overlap geneFrmd6, Actr10
Upstream geneMap4k5, Spg3a, EG622339, Sav1, LOC100040999, Nin, ENSMUSG00000056391, Gm804, Pygl, Trim9, Txndc1, LOC100040965, LOC100041061
Downstream genePsma3, 3110056K07Rik, Arid4a, Timm9, LOC100041035, 2700049A03Rik, LOC666162, Dact1, LOC100041190, Daam1, LOC666213
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315D18.bB6Ng01-315D18.g
ACCGA105937GA105938
length1,144983
definitionB6Ng01-315D18.b B6Ng01-315D18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,965,555 - 71,966,696)(72,074,379 - 72,075,370)
sequence
gaattcattttattgtttctactgagcggaagcctctgtcttgtcttgcc
aaaaagcaatgtgacacgacgggaactggagactagagatggaggaagga
gaggatctgaaaatggcagtaaattttatttcagcattggtttttgtctc
tcaaattgcttggcttcctgaataaaatttctattttgtgtctgtctgtg
ttttaaatgctcagagttgtcaaccgcgcacatgaagtggtagcagttgc
taagtttctctttttcatcttgactgtagtttatcagtagtcagagtcta
agccctgtccgggctgagcagatgctggagatgagctaagatgtcctctg
cctcttacatcagaatcagatactggttaaccagtcttgagaactgagat
agtcttatttttcccctttttacttttagcagttaagttatactttacgc
attgcaaagcatcaacatccttcagtgtacagtctagtgtatctctgtta
gtttatgctcctatgtagctggtgcccagtttcagatttcctgtctcctc
agaaagaccctttgggactcttcctcgacagcaattgtcctcagtgataa
caactgttttgatgggaaggcggtcccactcagttacgactctcctgcca
ccagaatgatgtagttcttaccataaagccctttttcactcagcctctga
ccatggaattgccacagcagcagtcatttgtcttccttataagataatat
cccagcagtatggccgagtcccattttgttacacacttactgctgttgat
ggatattgtgccatttgaaattccatattaataaaactgctatgacccct
cctggggtgtagtcctacagacacagacacacttaggtcactgtgatttt
atcagactggatatgtaactcatagaccatcccagggagtacagttgctg
ggaaactgccagcaggctcatgataatccgtttgtgcctatcaactttgg
gggtttctttggttgtgtgtttgttttgagaataaggctttactatgtag
gccaggctggccctggaaattgctgatagaaccaggcctaagccttccaa
ctcaatcagcatctgacatctggcctgctcagtgctggaactga
gaattcttaaaagtcggggaaggaaaaacccaccttaggaaaaggaacaa
agccgggcgtggtggcgcatgcctttaatcccagcactcgggaggcagag
gcaggcggatttctgagttcgaggccagcctggtctacaaagtgagttcc
aggacagccaggactacacagagaaaccctgtctcaaaaacaccaaaaaa
aaaaaaaaaaaaaaaaaaaaaaaaggaaaaggaacaaaaggaggcaattg
acccccccatcctccgaccaagttcatcatcagagtccgaacatgacgtt
tggttcaactgctgtgcataactaagcagcctcggtcaaggtgtgatacc
ttttccatcatggtttcaactttagcctctcctgcaaggtggtgtgaaat
ctatgtgtgagagaaagctgtccctctggctggaaccaggcaggcttcag
ccttctttcacccagcatgtaattcctggagaagttccagtttcttggag
tcttatcaaaaagaggagcacaagagcttctttagaatatcttcattcct
actaggaagattatgagacttagcgttaggaaaggctaaggtggcttggg
ggactccagttgctcggctcattctaacaactatcaggttatgatcttaa
gtattaagtggagggagggcaacagataaatcaaaggagtgggcatggaa
cctgacctagtggtgggtggattttaaatcccaattgtaaatacaacgtt
agaaatatttttatttaaaaaatatatctgagccgagcgtggtggcacac
gcctttaatcccagtactcgggaggcagaggcaggcggatttctgagttc
gaggtcatctggtctacaaagtgagttccaggacagccagggctatacag
aaaatcctgtctcaaaaaacaaatataaatttctgagacttttattttat
atagctagaaaaatatttttcagcagtgatgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_71965555_71966696
seq2: B6Ng01-315D18.b_48_1191

seq1  GAATTCATTTTATTGTTTCTACTGAGCGGAAGCCTCTGTCTTGTCTTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTATTGTTTCTACTGAGCGGAAGCCTCTGTCTTGTCTTGCC  50

seq1  AAAAAGCAATGTGACACGACGGGAACTGGAGACTAGAGATGGAGGAAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCAATGTGACACGACGGGAACTGGAGACTAGAGATGGAGGAAGGA  100

seq1  GAGGATCTGAAAATGGCAGTAAATTTTATTTCAGCATTGGTTTTTGTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATCTGAAAATGGCAGTAAATTTTATTTCAGCATTGGTTTTTGTCTC  150

seq1  TCAAATTGCTTGGCTTCCTGAATAAAATTTCTATTTTGTGTCTGTCTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTGCTTGGCTTCCTGAATAAAATTTCTATTTTGTGTCTGTCTGTG  200

seq1  TTTTAAATGCTCAGAGTTGTCAACCGCGCACATGAAGTGGTAGCAGTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATGCTCAGAGTTGTCAACCGCGCACATGAAGTGGTAGCAGTTGC  250

seq1  TAAGTTTCTCTTTTTCATCTTGACTGTAGTTTATCAGTAGTCAGAGTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTCTCTTTTTCATCTTGACTGTAGTTTATCAGTAGTCAGAGTCTA  300

seq1  AGCCCTGTCCGGGCTGAGCAGATGCTGGAGATGAGCTAAGATGTCCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTGTCCGGGCTGAGCAGATGCTGGAGATGAGCTAAGATGTCCTCTG  350

seq1  CCTCTTACATCAGAATCAGATACTGGTTAACCAGTCTTGAGAACTGAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTACATCAGAATCAGATACTGGTTAACCAGTCTTGAGAACTGAGAT  400

seq1  AGTCTTATTTTTCCCCTTTTTACTTTTAGCAGTTAAGTTATACTTTACGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTATTTTTCCCCTTTTTACTTTTAGCAGTTAAGTTATACTTTACGC  450

seq1  ATTGCAAAGCATCAACATCCTTCAGTGTACAGTCTAGTGTATCTCTGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAAAGCATCAACATCCTTCAGTGTACAGTCTAGTGTATCTCTGTTA  500

seq1  GTTTATGCTCCTATGTAGCTGGTGCCCAGTTTCAGATTTCCTGTCTCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATGCTCCTATGTAGCTGGTGCCCAGTTTCAGATTTCCTGTCTCCTC  550

seq1  AGAAAGACCCTTTGGGACTCTTCCTCGACAGCAATTGTCCTCAGTGATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGACCCTTTGGGACTCTTCCTCGACAGCAATTGTCCTCAGTGATAA  600

seq1  CAACTGTTTTGATGGGAAGGCGGTCCCACTCAGTTACGACTCTCCTGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGTTTTGATGGGAAGGCGGTCCCACTCAGTTACGACTCTCCTGCCA  650

seq1  CCAGAATGATGTAGTTCTTACCATAAAGCCCTTTTTCACTCAGCCTCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAATGATGTAGTTCTTACCATAAAGCCCTTTTTCACTCAGCCTCTGA  700

seq1  CCATGGAATTGCCACAGCAGCAGTCATTTGTCTTCCTTATAAGATAATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGAATTGCCACAGCAGCAGTCATTTGTCTTCCTTATAAGATAATAT  750

seq1  CCCAGCAGTATGGCCGAGTCCCATTTTGTTACACACTTACTGCTGTTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCAGTATGGCCGAGTCCCATTTTGTTACACACTTACTGCTGTTGAT  800

seq1  GGATATTGTGCCATTTGAAATTCCATATTAATAAAACTGCTATGACCCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATTGTGCCATTTGAAATTCCATATTAATAAAACTGCTATGACCCCT  850

seq1  CCTGGGGTGTAGTCCTACAGACACAGACACACTTAGGTCACTGTGATTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGGTGTAGTCCTACAGACACAGACACACTTAGGTCACTGTGATTTT  900

seq1  ATCAGACTGGATATGTAACTCATAGACCATCCCAGGGAGTACAGTTGCT-  949
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATCAGACTGGATATGTAACTCATAGACCATCCCAGGGAGTACAGTTGCTG  950

seq1  GGAAACTGCCAGCAGGCTCATGATAATCCGTTTTGTGCCTATCAACTTT-  998
      |||||||||||||||||||||||||||||| |||||||||||||||||| 
seq2  GGAAACTGCCAGCAGGCTCATGATAATCCG-TTTGTGCCTATCAACTTTG  999

seq1  GGGGTTTCTTTGTTGTTGTTGTTTTGTTTTGAG-ATAAGGCTTTACTATG  1047
      ||||||||||||  |||||   ||||||||||| ||||||||||||||||
seq2  GGGGTTTCTTTG--GTTGTGTGTTTGTTTTGAGAATAAGGCTTTACTATG  1047

seq1  TAGGCCAGGCTGG-CCTGGAAATTGCTGTATAG-ACCAGGC--TAGCC-T  1092
      ||||||||||||| |||||||||||||| |||| |||||||   |||| |
seq2  TAGGCCAGGCTGGCCCTGGAAATTGCTG-ATAGAACCAGGCCTAAGCCTT  1096

seq1  CAAACTC-ATCAGCATCTGACATCTGCCTGCCTCCCAAGTGCTGGGACTG  1141
      | ||||| ||||||||||||||||||   |||| |  |||||||| ||||
seq2  CCAACTCAATCAGCATCTGACATCTG---GCCTGCTCAGTGCTGGAACTG  1143

seq1  A  1142
      |
seq2  A  1144

seq1: chr12_72074379_72075370
seq2: B6Ng01-315D18.g_66_1048 (reverse)

seq1  TGCATCACCCTGCTGGAAAATA-TTTTCTAGCTATATAAAATAAAAGTCT  49
      |||||||  |||||| |||||| |||||||||||||||||||||||||||
seq2  TGCATCA--CTGCTGAAAAATATTTTTCTAGCTATATAAAATAAAAGTCT  48

seq1  CCAGATATTTATTTATTTTGTTTTTTTGAGACAGGGTTTTTCTGTATAGC  99
       |||| |||||  |||||   |||||||||||| || |||||||||||||
seq2  -CAGAAATTTA--TATTT--GTTTTTTGAGACA-GGATTTTCTGTATAGC  92

seq1  CCTGGCTGTCCTGGAACTCACTTTGTAGACCAGATTGACCTCGAACTCAG  149
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCTGGCTGTCCTGGAACTCACTTTGTAGACCAGA-TGACCTCGAACTCAG  141

seq1  AAATCCGCCTGCCTCTGCCTCCCGAGTACTGGGATTAAAGGCGTGTGCCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCGCCTGCCTCTGCCTCCCGAGTACTGGGATTAAAGGCGTGTGCCA  191

seq1  CCACGCTCGGCTCAGATATATTTTTTTAAATAAAAATATTTCTAACGTTG  249
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CCACGCTCGGCTCAGATATA-TTTTTTAAATAAAAATATTTCTAACGTTG  240

seq1  TATTTACAATTGGGATTTAAAATCCACCCACCACTAGGTCAGGTTCCATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACAATTGGGATTTAAAATCCACCCACCACTAGGTCAGGTTCCATG  290

seq1  CCCACTCCTTTGATTTATCTGTTGCCCTCCCTCCACTTAATACTTAAGAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCCTTTGATTTATCTGTTGCCCTCCCTCCACTTAATACTTAAGAT  340

seq1  CATAACCTGATAGTTGTTAGAATGAGCCGAGCAACTGGAGTCCCCCAAGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACCTGATAGTTGTTAGAATGAGCCGAGCAACTGGAGTCCCCCAAGC  390

seq1  CACCTTAGCCTTTCCTAACGCTAAGTCTCATAATCTTCCTAGTAGGAATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTAGCCTTTCCTAACGCTAAGTCTCATAATCTTCCTAGTAGGAATG  440

seq1  AAGATATTCTAAAGAAGCTCTTGTGCTCCTCTTTTTGATAAGACTCCAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATTCTAAAGAAGCTCTTGTGCTCCTCTTTTTGATAAGACTCCAAG  490

seq1  AAACTGGAACTTCTCCAGGAATTACATGCTGGGTGAAAGAAGGCTGAAGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGAACTTCTCCAGGAATTACATGCTGGGTGAAAGAAGGCTGAAGC  540

seq1  CTGCCTGGTTCCAGCCAGAGGGACAGCTTTCTCTCACACATAGATTTCAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGGTTCCAGCCAGAGGGACAGCTTTCTCTCACACATAGATTTCAC  590

seq1  ACCACCTTGCAGGAGAGGCTAAAGTTGAAACCATGATGGAAAAGGTATCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCTTGCAGGAGAGGCTAAAGTTGAAACCATGATGGAAAAGGTATCA  640

seq1  CACCTTGACCGAGGCTGCTTAGTTATGCACAGCAGTTGAACCAAACGTCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTGACCGAGGCTGCTTAGTTATGCACAGCAGTTGAACCAAACGTCA  690

seq1  TGTTCGGACTCTGATGATGAACTTGGTCGGAGGATGGGGGGGTCAATTGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCGGACTCTGATGATGAACTTGGTCGGAGGATGGGGGGGTCAATTGC  740

seq1  CTCCTTTTGTTCCTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTTGTTCCTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG  790

seq1  GTGTTTTTGAGACAGGGTTTCTCTGTGTAGTCCTGGCTGTCCTGGAACTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTTGAGACAGGGTTTCTCTGTGTAGTCCTGGCTGTCCTGGAACTC  840

seq1  ACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCC  890

seq1  TCCCGAGTGCTGGGATTAAAGGCATGCGCCACCACGCCCGGCTTTGTTCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGAGTGCTGGGATTAAAGGCATGCGCCACCACGCCCGGCTTTGTTCC  940

seq1  TTTTCCTAAGGTGGGTTTTTCCTTCCCCGACTTTTAAGAATTC  992
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTAAGGTGGGTTTTTCCTTCCCCGACTTTTAAGAATTC  983