BAC Information

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BAC

Clone NameB6Ng01-316P17
Chromosome12 (Build37)
Map Location 83,242,145 - 83,242,634
singlet/doubletsinglet
Overlap genenone
Upstream geneSmoc1, Slc8a3, LOC100042143, LOC100042148, EG214321, Hspe1-ps2, Adam4, 1810020G14Rik, Synj2bp, Adam21, Med6, Ttc9, LOC100041821, Map3k9, Pcnx
Downstream geneSipa1l1, LOC432675, EG666911, Rgs6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316P17.bB6Ng01-316P17.g
ACCGA107240GA107241
length4841,179
definitionB6Ng01-316P17.b B6Ng01-316P17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ttgctcacagtaggaagtgcacatgtggggccaagcatcctggcagcatc
gtgaagtctcaggagtgcatttggacttttagggggtaggggggatgcga
atttatatccttcaccagattgttaaaggtatgtgccaacagaaatacca
ggaaccactgaagtcccttcctttttctctgagtttagctaacagctcta
gtcatgccccagagtcgagagaacttatataattttatggtaactatatg
ggcttcattagcgccaagtgcaaagaacagaaatgaaaaggaaagtcaga
catagagattctgctggcacctctctctctctttctctctctctctctct
ctctctctctctctcaccagtcagcacaatatgctcaggcttaaatttac
gtcactattttataacttaaaaaaaaacaaaacccacctcattttcttca
ataaaccaacactgccttggggtggggggtgggg
gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgagggtgtggagaaagaggaacactcctctattggtggtg
ggattgcaagcttgtacaactactctggaaatcagtctggaggttcctca
gaaaattggacatagtactaccaggggatccctcaatacctctcctgggc
atatatccagaagatgttccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gccctcaacagaggaatggatacagaaaatgtggtgcatttacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctaggcaaa
tggatagacctggagggcatcatcctgagtgaggtaacccaatcacaaaa
gaactcacacaatatgtactctctgataagtggatattagccccgaaact
tagaatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaacgaagaccaaagtatggacactttgtcccttcttagaattgggaa
caaaacacccatggaacgagttacagagacacagtttggagctgagacga
aaagatggaccatctagagactgccatatctggggatccatcccataatc
agcctccaaatgctgacaccattgcatacactagcaagattttgctgaaa
ggacccagatatagctgtctcttgtgagactatgccggggcctagcaaac
acaaaagtggatgctcacagtcagctattggatgggatcacagggccccc
aatggaggagctagagaaagtacccaaagagctaaagggatctgcaccta
taggtggacaacatatgaactaaccagtacccgcaggagctcgtgttctt
ctatctgcatatgtatcagaaggatgcctagtcggcatcagtggaaagag
aaggccattgttcatgcactttatctggcctcagtataggacgtctaggc
ctcaaagacagtgttgggaagtatggccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_83242145_83242634
seq2: B6Ng01-316P17.b_50_539

seq1  GAATTCTTGCTCACAGTAGGAAGTGCACATGTGGGGCCAAGCATCCTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCTCACAGTAGGAAGTGCACATGTGGGGCCAAGCATCCTGGC  50

seq1  AGCATCGTGAAGTCTCAGGAGTGCATTTGGACTTTTAGGGGGTAGGGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCGTGAAGTCTCAGGAGTGCATTTGGACTTTTAGGGGGTAGGGGGG  100

seq1  ATGCGAATTTATATCCTTCACCAGATTGTTAAAGGTATGTGCCAACAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGAATTTATATCCTTCACCAGATTGTTAAAGGTATGTGCCAACAGAA  150

seq1  ATACCAGGAACCACTGAAGTCCCTTCCTTTTTCTCTGAGTTTAGCTAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAGGAACCACTGAAGTCCCTTCCTTTTTCTCTGAGTTTAGCTAACA  200

seq1  GCTCTAGTCATGCCCCAGAGTCGAGAGAACTTATATAATTTTATGGTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTAGTCATGCCCCAGAGTCGAGAGAACTTATATAATTTTATGGTAAC  250

seq1  TATATGGGCTTCATTAGCGCCAAGTGCAAAGAACAGAAATGAAAAGGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGGGCTTCATTAGCGCCAAGTGCAAAGAACAGAAATGAAAAGGAAA  300

seq1  GTCAGACATAGAGATTCTGCTGGCACCTCTCTCTCTCTTTCTCTCTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGACATAGAGATTCTGCTGGCACCTCTCTCTCTCTTTCTCTCTCTCT  350

seq1  CTCTCTCTCTCTCTCTCTCTCACCAGTCAGCACAATATGCTCAGGCTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCACCAGTCAGCACAATATGCTCAGGCTTAA  400

seq1  ATTTACGTCACTATTTTATAACTTAAAAAAAAACAAAACCCACCTCATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACGTCACTATTTTATAACTTAAAAAAAAACAAAACCCACCTCATTT  450

seq1  TCTTCAATAAACCAACACTGCCTTGGGGTGGGGGGTGGGG  490
      ||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAATAAACCAACACTGCCTTGGGGTGGGGGGTGGGG  490