BAC Information

Click to search

BAC

Clone NameB6Ng01-318F15
Chromosome12 (Build37)
Map Location 25,515,638 - 25,651,982
singlet/doubletdoublet
Overlap geneLOC668719, Mboat2
Upstream geneLOC668703, LOC546534, 9030624G23Rik, EG668710, LOC100042945, EG668711, EG668714, LOC629364, Taf1b, Grhl1, EG629383, Klf11, Cys1, Rrm2
Downstream geneEG629397, C330002I19Rik, Id2, LOC100042973, LOC100042974, LOC668726
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318F15.bB6Ng01-318F15.g
ACCGA108266GA108267
length7041,126
definitionB6Ng01-318F15.b B6Ng01-318F15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,515,638 - 25,516,341)(25,651,445 - 25,651,982)
sequence
gaattcacatctggcagagaggctcgcaggcacgaagggatgcttaccag
cagcctttcctttgaggaggcggggcctttacatgccggccgctggctac
ccaggctttccctcgggcgctgcccaggtccgacctgtttccctctcagc
tggatgcgcggtgagggcatcgtcccagcgcggccgatcaggcccaggtg
ggcggcgggtgaggtaggaccacccggctttccgcaagtttgggcagccc
aggagacaaaggcactttctgctttggggttcttgtagcgcgtctccctg
aagctcccagccccctacctttgttcccaacttcccccggcgctgcaact
ctttgtctggccgccaccccgagcccctttgttgtccaccgtcactgcca
gtgaggggtggggacggcgcccaccattcctgagaaaggaagtgagcaga
ggcggaggcaaagccgccctcacacgcccccaccagctagcctgactctc
ggtcgccctcgggcgacagccatggtcgagcctcagcccctcgctggggt
cctcagcacggaggaggggcgcggcgaggccagcgtcctctgattggctg
tgggagtcggggcgccgcgacgccattggaccgcggagctgtctggcgca
cgagtgcgcgaggtggggagggggctctggaagctgctggaaatcgggcc
gccc
gaattcactgtgtgcacttgtgtacatatgtgtacacacacacacacaca
cacacacacacacacacacagggataacaaccctgggctagagcatgtct
agctttatcttgctcagccctcaggacctactccctgctagcctaataag
ccatatatcgctctgaaagttatgacaaggattcaagcataaataaaaca
tacttaaacagtaagagagatatagtgtagaggaattttagtccatcaag
gctgctctggctgaaatacagacacacccttagtacatacctttaatccc
aaacaacaaaggtcaaactagttggtagaaggatgcaactatgtttgaaa
gtggcttctagccaggtgtggtggcgcacacctttaatcccagcacttgg
gaggcagaggcaggtggctttctgagtttgaggccagcctggtctacaaa
gtgagttctaggacagccagggctatatagagaaaccctgtctcgaaaaa
ccaaaaaaaaaaaaaaaaaaaaaaaagaaagaaggaaagaaagtgacttc
taattgaagggcagacaaagtggtgagtcagagaaagatttgacagaatg
agtcagagataggatacacccccactctcacgagaagagacaggaagaag
tggcagaagatcgctgggcagagagagaggcagcacttttactaggaggg
ttttacagagacaggttgaaaagagaacaagccagagaatgagaagaagc
cagaagattagaacagattgccagagttagtttgaggccaagcagaacaa
ttcagtcaaaggccaagagagaagccagatccaatgagtcagcttgggag
aggagtttgagccagaaggagctaaatttgagcccggcagccacagtttc
agaaaagaataagaaaagggtgagcttattcagtagtaagtctcagaggc
tgaaaatatcccagggcctggataagattgtacagaagctagaagcttcc
aggactaggccaaggttagcagactgagacagttagccttgggagatgac
attacatcagcaataaaggttacattgacatataaggtagaatatcttac
cgagtagaatgccagtacttcatgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_25515638_25516341
seq2: B6Ng01-318F15.b_43_746

seq1  GAATTCACATCTGGCAGAGAGGCTCGCAGGCACGAAGGGATGCTTACCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATCTGGCAGAGAGGCTCGCAGGCACGAAGGGATGCTTACCAG  50

seq1  CAGCCTTTCCTTTGAGGAGGCGGGGCCTTTACATGCCGGCCGCTGGCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTTCCTTTGAGGAGGCGGGGCCTTTACATGCCGGCCGCTGGCTAC  100

seq1  CCAGGCTTTCCCTCGGGCGCTGCCCAGGTCCGACCTGTTTCCCTCTCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTTTCCCTCGGGCGCTGCCCAGGTCCGACCTGTTTCCCTCTCAGC  150

seq1  TGGATGCGCGGTGAGGGCATCGTCCCAGCGCGGCCGATCAGGCCCAGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGCGCGGTGAGGGCATCGTCCCAGCGCGGCCGATCAGGCCCAGGTG  200

seq1  GGCGGCGGGTGAGGTAGGACCACCCGGCTTTCCGCAAGTTTGGGCAGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGCGGGTGAGGTAGGACCACCCGGCTTTCCGCAAGTTTGGGCAGCCC  250

seq1  AGGAGACAAAGGCACTTTCTGCTTTGGGGTTCTTGTAGCGCGTCTCCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGACAAAGGCACTTTCTGCTTTGGGGTTCTTGTAGCGCGTCTCCCTG  300

seq1  AAGCTCCCAGCCCCCTACCTTTGTTCCCAACTTCCCCCGGCGCTGCAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCCCAGCCCCCTACCTTTGTTCCCAACTTCCCCCGGCGCTGCAACT  350

seq1  CTTTGTCTGGCCGCCACCCCGAGCCCCTTTGTTGTCCACCGTCACTGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCTGGCCGCCACCCCGAGCCCCTTTGTTGTCCACCGTCACTGCCA  400

seq1  GTGAGGGGTGGGGACGGCGCCCACCATTCCTGAGAAAGGAAGTGAGCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGGGTGGGGACGGCGCCCACCATTCCTGAGAAAGGAAGTGAGCAGA  450

seq1  GGCGGAGGCAAAGCCGCCCTCACACGCCCCCACCAGCTAGCCTGACTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGAGGCAAAGCCGCCCTCACACGCCCCCACCAGCTAGCCTGACTCTC  500

seq1  GGTCGCCCTCGGGCGACAGCCATGGTCGAGCCTCAGCCCCTCGCTGGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCGCCCTCGGGCGACAGCCATGGTCGAGCCTCAGCCCCTCGCTGGGGT  550

seq1  CCTCAGCACGGAGGAGGGGCGCGGCGAGGCCAGCGTCCTCTGATTGGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCACGGAGGAGGGGCGCGGCGAGGCCAGCGTCCTCTGATTGGCTG  600

seq1  TGGGAGTCGGGGCGCCGCGACGCCATTGGACCGCGGAGCTGTCTGGCGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGTCGGGGCGCCGCGACGCCATTGGACCGCGGAGCTGTCTGGCGCA  650

seq1  CGAGTGCGCGAGGTGGGGAGGGGGCTCTGGAAGCTGCTGGAAATCGGGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTGCGCGAGGTGGGGAGGGGGCTCTGGAAGCTGCTGGAAATCGGGCC  700

seq1  GCCC  704
      ||||
seq2  GCCC  704

seq1: chr12_25651445_25651982
seq2: B6Ng01-318F15.g_652_1191 (reverse)

seq1  GTCATGAAGTACT-GCATTTTCTTAATTGGTAAGATATTCTACTTTATAT  49
      ||||||||||||| |||||    || | ||||||||||||||| ||||| 
seq2  GTCATGAAGTACTGGCATT---CTACTCGGTAAGATATTCTACCTTATA-  46

seq1  TGTAAATGTAACTTTTATTTGCCTGATGTAATTGTCATCT-CCAAGGCTT  98
      ||| |||||||| ||||||   ||||||||| |||||||| |||||||| 
seq2  TGTCAATGTAACCTTTATT--GCTGATGTAA-TGTCATCTCCCAAGGCTA  93

seq1  ACTGTCTCAGTCTGCTAACCTGGGCCTAGTCCTGGAAGCTTCTAGCTTCT  148
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACTGTCTCAGTCTGCTAACCTTGGCCTAGTCCTGGAAGCTTCTAGCTTCT  143

seq1  GTACAATCTTATCCAGG-CCTGGAATATTTTCAGCCTCTGAGACTTACTA  197
      ||||||||||||||||| ||||| ||||||||||||||||||||||||||
seq2  GTACAATCTTATCCAGGCCCTGGGATATTTTCAGCCTCTGAGACTTACTA  193

seq1  CTGAATAAGCTCACCC-TTTCTTATTC-TTTCTG-AACTGTGGCTGCCGG  244
      |||||||||||||||| |||||||||| |||||| |||||||||||||||
seq2  CTGAATAAGCTCACCCTTTTCTTATTCTTTTCTGAAACTGTGGCTGCCGG  243

seq1  GCTC-AATTTAGCT-CTTCTGGCTCAAACTCCTCT-CCAAGCTGACTCAT  291
      |||| ||||||||| |||||||||||||||||||| ||||||||||||||
seq2  GCTCAAATTTAGCTCCTTCTGGCTCAAACTCCTCTCCCAAGCTGACTCAT  293

seq1  TGGATCTGGCTTCTCTCTTGGCCTTTGACTGAATTGTTCTGCTTGGCCTC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCTGGCTTCTCTCTTGGCCTTTGACTGAATTGTTCTGCTTGGCCTC  343

seq1  AAACTAACTCTGGCAATCTGTTCTAATCTTCTGGCTTCTTCTCATTCTCT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAACTCTGGCAATCTGTTCTAATCTTCTGGCTTCTTCTCATTCTCT  393

seq1  GGCTTGTTCTCTTTTCAACCTGTCTCTGTAAAACCCTCCTAGTAAAAGTG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGTTCTCTTTTCAACCTGTCTCTGTAAAACCCTCCTAGTAAAAGTG  443

seq1  CTGCCTCTCTCTCTGCCCAGCGATCTTCTGCCACTTCTTCCTGTCTCTTC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCTCTCTCTGCCCAGCGATCTTCTGCCACTTCTTCCTGTCTCTTC  493

seq1  TCGTGAGAGTGGGGGTGTATCCTATCTCTGACTCATTCTGTCAAATC  538
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGAGAGTGGGGGTGTATCCTATCTCTGACTCATTCTGTCAAATC  540