BAC Information

Click to search

BAC

Clone NameB6Ng01-318H22
Chromosome12 (Build37)
Map Location 15,841,789 - 15,842,916
singlet/doubletsinglet
Overlap geneEG432636
Upstream geneLOC668492, LOC100042426, LOC217409, Trib2, LOC100043268
Downstream geneLOC100043273, Lpin1, Ntsr2, Greb1, E2f6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318H22.bB6Ng01-318H22.g
ACCGA108369GA108370
length1,1381,139
definitionB6Ng01-318H22.b B6Ng01-318H22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttatttcttcaatcttgcctctgactgtggtatggccaactgc
ttgagttcctgcttttctcagaaaagatggaaatgacctggaattgtaag
tcaaataaatcctttcctcctctgtattgtgttgggtgttttgtcacatg
tgaatgaaaggcactatgtgaagggttgcatggtaggtttgaatggtcca
ggcttggaagcagagtgtatctcttctacccagagtccattggctagaat
ttaggcataaagttaatacttaacagagacttggcgcagatgatccacgt
ttgtccaggaagggagaacaaactgatgtggtggttttgataaccacttg
atagtttgtgtgataataattcttagttcttaatgaatgtacagtaattt
cttgtttgatttttacattttgtatatatttatgaggcataatgtgatgt
tttgattaatgtatacatttagtaataaggttagttagcatatatgtcac
cttatgcttctttcatttatttgaaatgaatatgttcaaaatcctttctt
ctttactgtatacaaagcattataattaattgtattgctttgttgtacca
cagattacaaagcattatttcttgtctaactgtagcattgtacctatgct
ggttaattttaattatcagcttgacacaatttagaatcacctggaaagag
tttcttctattaaggaattgtctagatcaccttgcctatggaaatgtcct
tggggaaatacctggattgttaattggcccaccccactgtgggcagcatc
attccctaggatggccccagaactgtgtgaataattctggctctgctaag
caaggaggatgcatgagagaattcttttttctctactcttggctgtagct
gtgaatgtggccaactgcctgagttcccgtctgacttcccagaaatgatg
ggcataacctgggaaactgtaagtcaagtaagccatttcatcgtagatat
tgtttggccagagtgttagcatagcagcagaaatggaacctgtacagtgc
ctcttaacgaatatctgtcatggtctgatcatcacttctccagctccatg
gagataccttttaaaaaaaattggcttaagtgcgcgca
gaattctctttacagtcacgccaaggatgcccagctccaatcttggctct
tacttgacacaaatacttaacccagtcagcctcagattccatttccagcc
tgtcacaggatcagcataagggcctaatgaggtaatatatgtcaggttgc
taggaagagcctgatatggactaatattccctcctctcagctctttctca
aagggtcattacgcttctcagaattgatttaaactgcaagactaaggaag
aaaagagacatctctatttttttgagcatactatactgtttttaaaggca
cttcttttattatggagagacctctatacataatagaaagcccaagagat
agtggtatttataggatacatcaaaattgtcaattttttaaaatttggga
atggatgctcccatgtgtcacttaaacatgcaaggaacacatagtttccc
actgccaattatccttttcagcttttgtagcagattctgctattggcata
gccagcagctgtccttctacccttccatgatggtcaaatgcagttccctc
caaagaggttgaaatgccaatatttatttctcagagtcctatgcaaaaac
aaaaacaaacaaacaaacaaaaccaggattatatctatgttataataagc
tgatcgttggattatgggcagtatctttgaaggattttgaaataagactt
ctctccccaacacaagaaagatactctgggaagcgatcctactttgagtg
tctgctgggatactggttgtttgggtagaagagagacaagaagagaacca
agagagccagagagatgctttcactgaggccaggtacaactgaaatgagg
caaccgaacccctaagtcagtaaggactgcatgcaactctcacgtcacat
gttctgtccctagccagcattctaacctaaagctctctttttccatttct
tttaagaatgtttgagttcctatatttctatctctctggacaccaaggcc
agcaaaagcctcggaacccacataacacatctgcttacttacttaatcct
taccactgagtcagtcttttgttgtacccaaattcaattttgttctgaat
gaaccagccattgacactcttttcttcttgaacatgtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_15841789_15842916
seq2: B6Ng01-318H22.g_68_1206

seq1  GAATTCTCTTTACAGTCACGCCAAGGATGCCCAGCTCCAATCTTGGCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTACAGTCACGCCAAGGATGCCCAGCTCCAATCTTGGCTCT  50

seq1  TACTTGACACAAATACTTAACCCAGTCAGCCTCAGATTCCATTTCCAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGACACAAATACTTAACCCAGTCAGCCTCAGATTCCATTTCCAGCC  100

seq1  TGTCACAGGATCAGCATAAGGGCCTAATGAGGTAATATATGTCAGGTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACAGGATCAGCATAAGGGCCTAATGAGGTAATATATGTCAGGTTGC  150

seq1  TAGGAAGAGCCTGATATGGACTAATATTCCCTCCTCTCAGCTCTTTCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGAGCCTGATATGGACTAATATTCCCTCCTCTCAGCTCTTTCTCA  200

seq1  AAGGGTCATTACGCTTCTCAGAATTGATTTAAACTGCAAGACTAAGGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTCATTACGCTTCTCAGAATTGATTTAAACTGCAAGACTAAGGAAG  250

seq1  AAAAGAGACATCTCTATTTTTTTGAGCATACTATACTGTTTTTAAAGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGACATCTCTATTTTTTTGAGCATACTATACTGTTTTTAAAGGCA  300

seq1  CTTCTTTTATTATGGAGAGACCTCTATACATAATAGAAAGCCCAAGAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTTATTATGGAGAGACCTCTATACATAATAGAAAGCCCAAGAGAT  350

seq1  AGTGGTATTTATAGGATACATCAAAATTGTCAATTTTTTAAAATTTGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTATTTATAGGATACATCAAAATTGTCAATTTTTTAAAATTTGGGA  400

seq1  ATGGATGCTCCCATGTGTCACTTAAACATGCAAGGAACACATAGTTTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATGCTCCCATGTGTCACTTAAACATGCAAGGAACACATAGTTTCCC  450

seq1  ACTGCCAATTATCCTTTTCAGCTTTTGTAGCAGATTCTGCTATTGGCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCAATTATCCTTTTCAGCTTTTGTAGCAGATTCTGCTATTGGCATA  500

seq1  GCCAGCAGCTGTCCTTCTACCCTTCCATGATGGTCAAATGCAGTTCCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCAGCTGTCCTTCTACCCTTCCATGATGGTCAAATGCAGTTCCCTC  550

seq1  CAAAGAGGTTGAAATGCCAATATTTATTTCTCAGAGTCCTATGCAAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGGTTGAAATGCCAATATTTATTTCTCAGAGTCCTATGCAAAAAC  600

seq1  AAAAACAAACAAACAAACAAAACCAGGATTATATCTATGTTATAATAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAACAAACAAACAAAACCAGGATTATATCTATGTTATAATAAGC  650

seq1  TGATCGTTGGATTATGGGCAGTATCTTTGAAGGATTTTGAAATAAGACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCGTTGGATTATGGGCAGTATCTTTGAAGGATTTTGAAATAAGACTT  700

seq1  CTCTCCCCAACACAAGAAAGATACTCTGGGAAGCGATCCTACTTTGAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCCAACACAAGAAAGATACTCTGGGAAGCGATCCTACTTTGAGTG  750

seq1  TCTGCTGGGATACTGGTTGTTTGGGTAGAAGAGAGACAAGAAGAGAACCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGGGATACTGGTTGTTTGGGTAGAAGAGAGACAAGAAGAGAACCA  800

seq1  AGAGAGCCAGAGAGATGC-TTCACTGAGGCCAGGTACAACTGAAATGAGG  849
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AGAGAGCCAGAGAGATGCTTTCACTGAGGCCAGGTACAACTGAAATGAGG  850

seq1  CAACCGAACCCCTAAGTCAGT-AGGACTGCATGCAACTCTCACGTCACAT  898
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CAACCGAACCCCTAAGTCAGTAAGGACTGCATGCAACTCTCACGTCACAT  900

seq1  GTTCTGTCCCTAGCCAGCATTCTAACCTAAAGCTCTC-TTTTCCATTTCT  947
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GTTCTGTCCCTAGCCAGCATTCTAACCTAAAGCTCTCTTTTTCCATTTCT  950

seq1  TTT-AGAATGTTTGAGTTCCTATATTTCTATCTCTTCTGGACACC-AGGC  995
      ||| |||||||||||||||||||||||||||||| |||||||||| ||||
seq2  TTTAAGAATGTTTGAGTTCCTATATTTCTATCTC-TCTGGACACCAAGGC  999

seq1  CAGCAAAAGCCTCGG-ACCCACATAACACCATCTGCTTACTTACTT-ATC  1043
      ||||||||||||||| |||||||||||| ||||||||||||||||| |||
seq2  CAGCAAAAGCCTCGGAACCCACATAACA-CATCTGCTTACTTACTTAATC  1048

seq1  C-TACCACTGAGTCAGTCTTT--GTGTACCCAA--TCAATTTTG-TCTGA  1087
      | |||||||||||||||||||   |||||||||  ||||||||| |||||
seq2  CTTACCACTGAGTCAGTCTTTTGTTGTACCCAAATTCAATTTTGTTCTGA  1098

seq1  ATGACCCAG-CATGAACCAACTC-TTTCTTC-TGAACATTGTCA  1128
      |||| |||| |||  ||  |||| ||||||| |||||| |||||
seq2  ATGAACCAGCCATTGAC--ACTCTTTTCTTCTTGAACA-TGTCA  1139