BAC Information

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BAC

Clone NameB6Ng01-319F24
Chromosome12 (Build37)
Map Location 71,941,371 - 72,098,797
singlet/doubletdoublet
Overlap geneFrmd6, Actr10, Psma3
Upstream geneMap4k5, Spg3a, EG622339, Sav1, LOC100040999, Nin, ENSMUSG00000056391, Gm804, Pygl, Trim9, Txndc1, LOC100040965, LOC100041061
Downstream gene3110056K07Rik, Arid4a, Timm9, LOC100041035, 2700049A03Rik, LOC666162, Dact1, LOC100041190, Daam1, LOC666213
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319F24.bB6Ng01-319F24.g
ACCGA109021GA109022
length1,154594
definitionB6Ng01-319F24.b B6Ng01-319F24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,941,371 - 71,942,528)(72,098,204 - 72,098,797)
sequence
gaattcaagttactcatagaaggtgattttttaaataacattttaaagcc
tactacttcatataaacctaagattttcaaatgtaacattaaaaatattt
tttcaaaaatcaaattaaggaacagttcacacacacacacacacacacac
acaaatgtctagtgcctaaaatttacagtaaattctaattgaatatgttt
aaaatgaagcctttctaatcacaagagttcatttcagacatcagaaaaag
gacatttagacgatttgtaactcactgaattatttgcttttacaggtgcc
tagagaaacattaaaagagaaatttccatgaagtcacagagtaaaacctg
gtccagaaaactaatggaagtgacccagatagagtagaaaattgccttta
tcaatagcctgtgtgctcttaagtaggcctgcttcctgagaagtacggtg
ttaggagcttgggaatgagggtggtacagagagagatctaaattaatacg
ttttaatgcctgcttagatagggttttactgctatgaaaggataccatga
ccaaagcaactcttacaaaggacaacatttagttggggctggcttacagg
ttcagagattcagtccattatcatcaaagcaggagtatggcagcgttcag
gcaaccatgggactgaaggagctgatagttccaggcaactaagcaggcaa
ctaggaagatcttaaagcccactctctcagtgacacacccagtccaacaa
ggccatacctcctaatagtgttactccctgagccaaaagtatacagacca
tcacaatgtataaccaatttttttgttgttgaatagacatcgaaatagca
ttttaaattgcctaagagattggaaaggctgtgaacttttgtttgaggcc
ttgggtgtgctgccttggagccagctagactgcgtttcggggcacctagt
tgtgtgaaatggtgtgtggtgatcctgcatgtgttttctggtgctgcaca
gtgataactgttgggaaggtctttgtgctttgcagtcggcagcaagcaac
ttgaacaaccagatagaatccttgtctctctcttctgctcatactggcac
ttggaagcacagcctggtcctggaccatgtcagcagtgtcactggaaatt
attc
gaattctcatccaaccagtgtccaggaaactccctggattccgtttcatg
tcttgttggaatttatgtcctccaattcttaaagcaaattcttaaagcaa
atatcacaatgcaggcttgtgatagcccttggtaatagttatatttctgc
ttttctcactgagaaagagcttgaaaatttttaacttagttacagtggta
tacattgtaaaagttcaaataacccctttaaaattgctgctgtctaatga
agatcaaaactgtcctacctatcctaaaaaaaaaaaaaaaaaaccttttt
attgtaaatgtatgagtattttgtccgcatgtatgtctctgcatgcctgg
tacccaagaaagccagaagagggcgttggatcccttggagctgagtttac
aggtggctgcgagcagtctgaggtgggtgctgggaactgaactctataat
cctctgcaaaagtggcaagcagctctctgattcccagggtctactctttt
tttgtcttttggggttgtttgtttgttttggggttttgttttttgttttt
cgaggccgggtttctctgtataacccaggctgccctggaactca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_71941371_71942528
seq2: B6Ng01-319F24.b_46_1199

seq1  GAATTCAAGTTACTCATAGAAGGTGATTTTTTAAATAACATTTTAAAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTTACTCATAGAAGGTGATTTTTTAAATAACATTTTAAAGCC  50

seq1  TACTACTTCATATAAACCTAAGATTTTCAAATGTAACATTAAAAATATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACTTCATATAAACCTAAGATTTTCAAATGTAACATTAAAAATATTT  100

seq1  TTTCAAAAATCAAATTAAGGAACAGTTCACACACACACACACACACACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAAATCAAATTAAGGAACAGTTCACACACACACACACACACACAC  150

seq1  ACAAATGTCTAGTGCCTAAAATTTACAGTAAATTCTAATTGAATATGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGTCTAGTGCCTAAAATTTACAGTAAATTCTAATTGAATATGTTT  200

seq1  AAAATGAAGCCTTTCTAATCACAAGAGTTCATTTCAGACATCAGAAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAAGCCTTTCTAATCACAAGAGTTCATTTCAGACATCAGAAAAAG  250

seq1  GACATTTAGACGATTTGTAACTCACTGAATTATTTGCTTTTACAGGTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTAGACGATTTGTAACTCACTGAATTATTTGCTTTTACAGGTGCC  300

seq1  TAGAGAAACATTAAAAGAGAAATTTCCATGAAGTCACAGAGTAAAACCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAACATTAAAAGAGAAATTTCCATGAAGTCACAGAGTAAAACCTG  350

seq1  GTCCAGAAAACTAATGGAAGTGACCCAGATAGAGTAGAAAATTGCCTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGAAAACTAATGGAAGTGACCCAGATAGAGTAGAAAATTGCCTTTA  400

seq1  TCAATAGCCTGTGTGCTCTTAAGTAGGCCTGCTTCCTGAGAAGTACGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAGCCTGTGTGCTCTTAAGTAGGCCTGCTTCCTGAGAAGTACGGTG  450

seq1  TTAGGAGCTTGGGAATGAGGGTGGTACAGAGAGAGATCTAAATTAATACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAGCTTGGGAATGAGGGTGGTACAGAGAGAGATCTAAATTAATACG  500

seq1  TTTTAATGCCTGCTTAGATAGGGTTTTACTGCTATGAAAGGATACCATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATGCCTGCTTAGATAGGGTTTTACTGCTATGAAAGGATACCATGA  550

seq1  CCAAAGCAACTCTTACAAAGGACAACATTTAGTTGGGGCTGGCTTACAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGCAACTCTTACAAAGGACAACATTTAGTTGGGGCTGGCTTACAGG  600

seq1  TTCAGAGATTCAGTCCATTATCATCAAAGCAGGAGTATGGCAGCGTTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGATTCAGTCCATTATCATCAAAGCAGGAGTATGGCAGCGTTCAG  650

seq1  GCAACCATGGGACTGAAGGAGCTGATAGTTCCAGGCAACTAAGCAGGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCATGGGACTGAAGGAGCTGATAGTTCCAGGCAACTAAGCAGGCAA  700

seq1  CTAGGAAGATCTTAAAGCCCACTCTCTCAGTGACACACCCAGTCCAACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAAGATCTTAAAGCCCACTCTCTCAGTGACACACCCAGTCCAACAA  750

seq1  GGCCATACCTCCTAATAGTGTTACTCCCTGAGCCAAAAGTATACAGACCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATACCTCCTAATAGTGTTACTCCCTGAGCCAAAAGTATACAGACCA  800

seq1  TCACAATGTATAACCAATTTTTTTGTTGTTGAATAGACATCGAAATAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATGTATAACCAATTTTTTTGTTGTTGAATAGACATCGAAATAGCA  850

seq1  TTTTAAATTGCCTAAGAGATTGGAAAGGCTGTGAACTTTTGTTTGAGGCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATTGCCTAAGAGATTGGAAAGGCTGTGAACTTTTGTTTGAGGCC  900

seq1  TTGGGTGTGCTGCCTTGGAGCCAGCTAGACTGCGTTTCGGGGCACCCTAG  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTGGGTGTGCTGCCTTGGAGCCAGCTAGACTGCGTTTCGGGGCA-CCTAG  949

seq1  TTGTGGTGAAATGGTGTGGTGGTGATTCCTGCATGTGTTTTCTGGTGCTG  1000
      |||| |||||||||||| ||||||| ||||||||||||||||||||||||
seq2  TTGT-GTGAAATGGTGT-GTGGTGA-TCCTGCATGTGTTTTCTGGTGCTG  996

seq1  CACAGTGAT-ACTGTTGGG-AGGTCTTTGTGGCTTTGCAGGTCGGCAGCA  1048
      ||||||||| ||||||||| |||||||||| |||||||| ||||||||||
seq2  CACAGTGATAACTGTTGGGAAGGTCTTTGT-GCTTTGCA-GTCGGCAGCA  1044

seq1  AGCAACTTG-ACAA-CAGATAG-ATCCTGTCCTCTC-CTTCTTGCTCCTT  1094
      ||||||||| |||| ||||||| |||||   ||||| |||| ||||| | 
seq2  AGCAACTTGAACAACCAGATAGAATCCTTGTCTCTCTCTTC-TGCTCAT-  1092

seq1  CCCTGCCACCTGG-AGCACAGCTGGGTCTTGACTCATGTCCAGCAGTGTC  1143
        ||| ||| ||| ||||||||  |||| ||   ||||| ||||||||||
seq2  -ACTGGCACTTGGAAGCACAGCCTGGTCCTGGACCATGT-CAGCAGTGTC  1140

seq1  ACTGAAAATTTATTC  1158
      |||| ||| ||||||
seq2  ACTGGAAA-TTATTC  1154

seq1: chr12_72098204_72098797
seq2: B6Ng01-319F24.g_65_658 (reverse)

seq1  TGAGTTCCAGGGCAGCCTGGGATATACAGAGAAACCCGGCCTCGAAAAAC  50
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGAGTTCCAGGGCAGCCTGGGTTATACAGAGAAACCCGGCCTCGAAAAAC  50

seq1  AAAAAACAAAACCCCAAAACAAACAAACAACCCCAAAAGACAAAAAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACAAAACCCCAAAACAAACAAACAACCCCAAAAGACAAAAAAAGA  100

seq1  GTAGACCCTGGGAATCAGAGAGCTGCTTGCCACTTTTGCAGAGGATTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACCCTGGGAATCAGAGAGCTGCTTGCCACTTTTGCAGAGGATTATA  150

seq1  GAGTTCAGTTCCCAGCACCCACCTCAGACTGCTCGCAGCCACCTGTAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCAGTTCCCAGCACCCACCTCAGACTGCTCGCAGCCACCTGTAAAC  200

seq1  TCAGCTCCAAGGGATCCAACGCCCTCTTCTGGCTTTCTTGGGTACCAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCCAAGGGATCCAACGCCCTCTTCTGGCTTTCTTGGGTACCAGGC  250

seq1  ATGCAGAGACATACATGCGGACAAAATACTCATACATTTACAATAAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGAGACATACATGCGGACAAAATACTCATACATTTACAATAAAAAG  300

seq1  GTTTTTTTTTTTTTTTTTTAGGATAGGTAGGACAGTTTTGATCTTCATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTTTTTTTTTTTTAGGATAGGTAGGACAGTTTTGATCTTCATTA  350

seq1  GACAGCAGCAATTTTAAAGGGGTTATTTGAACTTTTACAATGTATACCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCAGCAATTTTAAAGGGGTTATTTGAACTTTTACAATGTATACCAC  400

seq1  TGTAACTAAGTTAAAAATTTTCAAGCTCTTTCTCAGTGAGAAAAGCAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACTAAGTTAAAAATTTTCAAGCTCTTTCTCAGTGAGAAAAGCAGAA  450

seq1  ATATAACTATTACCAAGGGCTATCACAAGCCTGCATTGTGATATTTGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAACTATTACCAAGGGCTATCACAAGCCTGCATTGTGATATTTGCTT  500

seq1  TAAGAATTTGCTTTAAGAATTGGAGGACATAAATTCCAACAAGACATGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATTTGCTTTAAGAATTGGAGGACATAAATTCCAACAAGACATGAA  550

seq1  ACGGAATCCAGGGAGTTTCCTGGACACTGGTTGGATGAGAATTC  594
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAATCCAGGGAGTTTCCTGGACACTGGTTGGATGAGAATTC  594