BAC Information

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BAC

Clone NameB6Ng01-321O22
Chromosome12 (Build37)
Map Location 102,550,341 - 102,551,343
singlet/doubletsinglet
Overlap genenone
Upstream geneTtc7b, Rps6ka5, LOC100040123, 9030617O03Rik, EG667148, Gpr68, 0610010D24Rik, LOC100040184, Smek1, 4930463M05Rik, Mylf-ps
Downstream gene4932415G16Rik, Mtac2d1, Fbln5, Trip11, Atxn3, LOC100040305, LOC100040297, Cpsf2, Slc24a4, Rin3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321O22.bB6Ng01-321O22.g
ACCGA110910GA110911
length1,1201,173
definitionB6Ng01-321O22.b B6Ng01-321O22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctgacaaatggagattctccacagatacttaaaagttacact
catacaagaatttatcaaggcctaggaaataggaggtttgtggtattgca
ttattcatgagaaggtctgctagagtagaaccccctggtgctagctttca
caagtctcaaaggagtagcacaaattgtgactagggtgtgaaatccttac
ctgtcattagctgatcctaagcagagctgttttatctttactgtaaatat
tatctggttcctgtaagtccttttgaagtcattcctttgttttgtgtcag
gtaacttcaatgtactttgcctgctgtgacatcctaccccctttattttc
tgtattatataagactggtgttcactttgtgacaatacattcagattcta
cacaatctcctgtgttgtgtctgtctgtcattcatttcgctgactccttg
tccatctgcaaccagagacccattgtacgcagacaagggacccagagggt
ctgtgccaaattaacaataaaggcaatcacctacagatatgccagcaggc
cttcagctcagatgagtctaggctgtgccaatttagtaatcaaaactagc
tagcacaggaggctggagagataagtggttaagagcatttagatttggat
ctcagggatggaataccttcttctgatatataccagtaccaagcacacag
gcactgcacatatatacatgcatgcaaaacactaatacgcgcaaacaaat
atatatcctaactagaataaactctaatgatataactaccacagagcctt
acttctaaacgttatatcaaggatcaaattctcaatacatgaaattttaa
aatacaaagaacaaggaaattaaagcaatattataatgaatagacacaag
catacaattgggataaagaaaaaataattagatctcatatgtactatgaa
gaaaacccaatcttgagaacatggggatataagaattttaaggctgagaa
caaataacagagtgcctagcagagagcttgccaagtgaaagaaattcaga
tgaagatccagtagccagaaataatgtggggagcaattgataagccagaa
gatgctagtgcatggcgcat
gaattctttgtttagctctgtaccccattttttaatggggttgtttgaat
ttctggaaattccaccagagaactcctaatcctgataaacagcttcagtg
caatagctggatataaaattatctcaaataagtcagtggcctttctctac
acaaaggaaaaacagaatgagaaagaaattagggaaacaacaccgatttg
acctctatctccactctcattaatatgggtggcctattgctcttattaaa
agaaaagggggagatgttgggagccgccctcacatttgccattataagat
ggcgctgacagctgtgttctaagtggtaaacataatctgcacacgtgcag
gggcagttttcccgccatgtgttctgcctttctcgtgatgacaactgagc
cgatgggctgcagccaatcagggagtaatacgtcctaggcggaggataat
tctccttaaaagggacggggttttgccattctttttctctctcttgcttt
cttgttcttgttctttttctctctcttgttcttgctttttctctctcttg
ctctctggctcctgaagatgtaagcaataaagctttgctgcagaagattc
cggtttgttgcgttcttcctggccggtcgcgtgaacgcgtgtaagagttg
gtgccgaaacctgggacgggactagaagacctgggacgagaaaatccggg
aagaaaaaacccgggacaagaaaaactcgggacgggagttaaccatcacc
ggcgcaaggaagattcctcattccggaaccagaactgcgggtcacggtca
taaaggttcccgtaaaacagactgttgagaaaggattcaactgcgtgaat
tcagaactcttcagctggggaacagggtacccataagtatagctttacaa
ggtaagtctggtcttgaactttctaacgaaattcagacagtctatcagaa
gtaaagtgggaaatagctttacaaggtacgcctggccttgactttctaac
gaaatcagacagtctatcagaagtaagtggcaaatagcttacaggtatgt
ttggcctttgactttttctagtgtagagccttttgtctttcacatgttat
caagcgtaggcaggctgaagtctgatgagtcaggccaatcttatccgaga
taaactgtgggggaagagacagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_102550341_102551343
seq2: B6Ng01-321O22.b_156_1164

seq1  AAGGTCTGCTAGAGTAGAACCCCCTGGTGCTAGCTTTCACAAGTCTCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTGCTAGAGTAGAACCCCCTGGTGCTAGCTTTCACAAGTCTCAAA  50

seq1  GGAGTAGCACAAATTGTGACTAGGGTGTGAAATCCTTACCTGTCATTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTAGCACAAATTGTGACTAGGGTGTGAAATCCTTACCTGTCATTAGC  100

seq1  TGATCCTAAGCAGAGCTGTTTTATCTTTACTGTAAATATTATCTGGTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCTAAGCAGAGCTGTTTTATCTTTACTGTAAATATTATCTGGTTCC  150

seq1  TGTAAGTCCTTTTGAAGTCATTCCTTTGTTTTGTGTCAGGTAACTTCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTCCTTTTGAAGTCATTCCTTTGTTTTGTGTCAGGTAACTTCAAT  200

seq1  GTACTTTGCCTGCTGTGACATCCTACCCCCTTTATTTTCTGTATTATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTGCCTGCTGTGACATCCTACCCCCTTTATTTTCTGTATTATATA  250

seq1  AGACTGGTGTTCACTTTGTGACAATACATTCAGATTCTACACAATCTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGGTGTTCACTTTGTGACAATACATTCAGATTCTACACAATCTCCT  300

seq1  GTGTTGTGTCTGTCTGTCATTCATTTCGCTGACTCCTTGTCCATCTGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGTGTCTGTCTGTCATTCATTTCGCTGACTCCTTGTCCATCTGCAA  350

seq1  CCAGAGACCCATTGTACGCAGACAAGGGACCCAGAGGGTCTGTGCCAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGACCCATTGTACGCAGACAAGGGACCCAGAGGGTCTGTGCCAAAT  400

seq1  TAACAATAAAGGCAATCACCTACAGATATGCCAGCAGGCCTTCAGCTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATAAAGGCAATCACCTACAGATATGCCAGCAGGCCTTCAGCTCAG  450

seq1  ATGAGTCTAGGCTGTGCCAATTTAGTAATCAAAACTAGCTAGCACAGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTCTAGGCTGTGCCAATTTAGTAATCAAAACTAGCTAGCACAGGAG  500

seq1  GCTGGAGAGATAAGTGGTTAAGAGCATTTAGATTTGGATCTCAGGGATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGAGATAAGTGGTTAAGAGCATTTAGATTTGGATCTCAGGGATGG  550

seq1  AATACCTTCTTCTGATATATACCAGTACCAAGCACACAGGCACTGCACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCTTCTTCTGATATATACCAGTACCAAGCACACAGGCACTGCACAT  600

seq1  ATATACATGCATGCAAAACACTAATACGCGCAAACAAATATATATCCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACATGCATGCAAAACACTAATACGCGCAAACAAATATATATCCTAA  650

seq1  CTAGAATAAACTCTAATGATATAACTACCACAGAGCCTTACTTCTAAACG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAATAAACTCTAATGATATAACTACCACAGAGCCTTACTTCTAAACG  700

seq1  TTATATCAAGGATCAAATTCTCAATACATG-AATTTTAAAATACAAAGAA  749
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTATATCAAGGATCAAATTCTCAATACATGAAATTTTAAAATACAAAGAA  750

seq1  CAAGGAAATTAAAGCAATATTATAATGAATAGACACAAGCATACAATT-G  798
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CAAGGAAATTAAAGCAATATTATAATGAATAGACACAAGCATACAATTGG  800

seq1  GATAAAGAAAAAATAATTAGATCTCATATGTACTATGAAGAAAA-CCAAT  847
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GATAAAGAAAAAATAATTAGATCTCATATGTACTATGAAGAAAACCCAAT  850

seq1  C-TGAG-ACAT-GGGATATAAGAA-TTTAAGGCTGAGAACAAATAACAGA  893
      | |||| |||| |||||||||||| |||||||||||||||||||||||||
seq2  CTTGAGAACATGGGGATATAAGAATTTTAAGGCTGAGAACAAATAACAGA  900

seq1  GTGCCTAGCAGAGAGCTTGCCAAGTGAAAGAAATTCAGATGAGAATCCAG  943
      ||||||||||||||||||||||||||||||||||||||||||  ||||||
seq2  GTGCCTAGCAGAGAGCTTGCCAAGTGAAAGAAATTCAGATGAAGATCCAG  950

seq1  TAGCCAGGAAATAATGTGGGGAGCATTTGATAAGCAGGAAGATGGCCAGT  993
      |||||| |||||||||||||||||| |||||||||  |||||| || |||
seq2  TAGCCA-GAAATAATGTGGGGAGCAATTGATAAGCCAGAAGAT-GCTAGT  998

seq1  GCAT-GCGCAT  1003
      |||| ||||||
seq2  GCATGGCGCAT  1009