BAC Information

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BAC

Clone NameB6Ng01-322N08
Chromosome12 (Build37)
Map Location 69,564,396 - 69,565,504
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040745, LOC100040681
Downstream geneLOC100040696, LOC665967, LOC665973, Rps29, Ppil5, Rpl36al, Mgat2, 1110034A24Rik, 9330151L19Rik, Pole2, Klhdc1, Klhdc2, Sdccag1, Arf6, LOC100040856
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322N08.bB6Ng01-322N08.g
ACCGA111574GA111575
length1,2361,095
definitionB6Ng01-322N08.b B6Ng01-322N08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgttaattatacatctgatagaggattaatatccagactatat
caagaactcaacaacaacaacaacaacaacacccaaaccaaccaaccaac
caaccaaccaaaaaaaaaaaaaaaaaaaatcaaaacagaatcaggagaat
gagtgacccaatttcaataatgggctagtaagaataaagagctctcacta
aaataagtaaataaataatggcaaaaagatctcaaaatgtgttgaagacc
cttagcagtgaggaaaatgcaaattgaaagcactttgagatttcattttg
ccccagtcaaaatggggcaatacaatgatgacaaatgctggagaggacat
ggggaaagggttttggtcaatttgaaaattccagaatcctgtatgggaat
cagtgtggagaatccttaggaaaggtaaaactacattactaggtattgca
ctccttggagtatgcccaaaggacgtggcatccttagccacaggtacttg
cttagctatgttcactgtcattccattcacaataggtagaaaatggaagc
aacctgggttcttcatctgatgaatggctagtgaactgcgtgcacacgcg
taaggaaatactattaagttgtacagaataatgaaatcatgaagcatgca
ggtaaggactatattgagtgaggtaactcaggacacattctctcttaatt
ctctgttctagttagataaatatttagatgagagtaaatagccaagagta
aatgaatgtataaggaaagaaaaaaatgaacattggagctgaggatctct
aggggaaagattaggaggacacaggttctgtgaaggggacaggctaaaaa
tggagtgagggaggaaggaggaataagtaatccctaaagatgtttgagaa
aaccacaaggcatcattttatatttatttacagatgtgcacaatgcagag
agacacacaggcttacagatagacagaacacaccagccaaaccagctcaa
ccttcaccccaataaaggttattgccttcttttggatggcatactcccct
ccaagccatagacttatttactaaataactgcagttgccaagcttggata
gttgttgcgctcgcagcatcctccactgtgaacctgtttgactgatatag
ctctcgagtctgttaaaagtatctgtacggtttaacgaacaggtatgcca
taactgctacttgctgatactacgtaggcctctcta
gaattctctctgtaactgccacactcaggtaaaagttttaaagaaatagt
ggaagatttggcgtgaatgttgaagttctattcaaaaccgtttccttaga
aatggactgaatgcatatgtattttcagctactgtaatttcacttactcg
attcattttctaattcttcacacacacacatatttcttgagaatgttttt
caaaaagagaacaaataagtaaattttaaaactgcaccatgtattgttta
tcttagccaaatgaagaggttctgctctgtttctttaaaatgaatgaatc
aatctaagtaatctagttttccaactcaggctggataccttctgctgttt
tcttcccctggaccctgctctgctgctcccactgcataacaggcgggagc
cacacatctcgtctccctgccttagtatgtgctgccgccactgtctgacc
cagagcatctttcagagctttgtacaagcactgtcttctatgagaaacct
ttcatactctcctacaccaagtactctcctacactttttcagatgccact
caagcaaaattccatcttcatcatcacagctctaaaacacaccccatcag
ccaagaggaactaatgatatcgtgtattagatgaatgaatgaatgaatgc
cattgtagacatcaaagtaacattagttagcctattcacatacccataga
gtcatcacacatcacctagttaacactagtagaggtgaaaagctgaaagt
ctttagatataaagaccaccctgactccatagcagagcctggattatcat
cagctaataagaggaagagaacaaaagtcgattccacttgctaattttgc
ttagggctttgcacagatgtgctctatcatctgaagtagactctgcagga
tgaactgacagaatgacatggatcaaaggtttccaggaatgcttcagtac
actgtaggagacacagaaaggatatatcaaatcacagagacatggtatga
acttgcctatatttgcagttagttcacactgtcacagatcatatgatctc
atagtcatactgtacccatgtctaggtttcatacttcaagaagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_69564396_69565504
seq2: B6Ng01-322N08.g_71_1165

seq1  GAATTCTCTCTGTAACTGCCACACTCAGGTAAAAGTTTTAAAGAAATAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTGTAACTGCCACACTCAGGTAAAAGTTTTAAAGAAATAGT  50

seq1  GGAAGATTTGGCGTGAATGTTGAAGTTCTATTCAAAACCGTTTCCTTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATTTGGCGTGAATGTTGAAGTTCTATTCAAAACCGTTTCCTTAGA  100

seq1  AATGGACTGAATGCATATGTATTTTCAGCTACTGTAATTTCACTTACTCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGACTGAATGCATATGTATTTTCAGCTACTGTAATTTCACTTACTCG  150

seq1  ATTCATTTTCTAATTCTTCACACACACACATATTTCTTGAGAATGTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTTTCTAATTCTTCACACACACACATATTTCTTGAGAATGTTTTT  200

seq1  CAAAAAGAGAACAAATAAGTAAATTTTAAAACTGCACCATGTATTGTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGAGAACAAATAAGTAAATTTTAAAACTGCACCATGTATTGTTTA  250

seq1  TCTTAGCCAAATGAAGAGGTTCTGCTCTGTTTCTTTAAAATGAATGAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGCCAAATGAAGAGGTTCTGCTCTGTTTCTTTAAAATGAATGAATC  300

seq1  AATCTAAGTAATCTAGTTTTCCAACTCAGGCTGGATACCTTCTGCTGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAAGTAATCTAGTTTTCCAACTCAGGCTGGATACCTTCTGCTGTTT  350

seq1  TCTTCCCCTGGACCCTGCTCTGCTGCTCCCACTGCATAACAGGCGGGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCCTGGACCCTGCTCTGCTGCTCCCACTGCATAACAGGCGGGAGC  400

seq1  CACACATCTCGTCTCCCTGCCTTAGTATGTGCTGCCGCCACTGTCTGACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATCTCGTCTCCCTGCCTTAGTATGTGCTGCCGCCACTGTCTGACC  450

seq1  CAGAGCATCTTTCAGAGCTTTGTACAAGCACTGTCTTCTATGAGAAACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCATCTTTCAGAGCTTTGTACAAGCACTGTCTTCTATGAGAAACCT  500

seq1  TTCATACTCTCCTACACCAAGTACTCTCCTACACTTTTTCAGATGCCACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATACTCTCCTACACCAAGTACTCTCCTACACTTTTTCAGATGCCACT  550

seq1  CAAGCAAAATTCCATCTTCATCATCACAGCTCTAAAACACACCCCATCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAAAATTCCATCTTCATCATCACAGCTCTAAAACACACCCCATCAG  600

seq1  CCAAGAGGAACTAATGATATCGTGTATTAGATGAATGAATGAATGAATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGGAACTAATGATATCGTGTATTAGATGAATGAATGAATGAATGC  650

seq1  CATTGTAGACATCAAAGTAACATTAGTTAGCCTATTCACATACCCATAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTAGACATCAAAGTAACATTAGTTAGCCTATTCACATACCCATAGA  700

seq1  GTCATCACACATCACCTAGTTAACACTAGTAGAGGTGAAAAGCTGAAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCACACATCACCTAGTTAACACTAGTAGAGGTGAAAAGCTGAAAGT  750

seq1  CTTTAGATATAAAGACCACCCTGACTCCATAGCAGAGCCTGGATTATCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGATATAAAGACCACCCTGACTCCATAGCAGAGCCTGGATTATCAT  800

seq1  CAGCTAATAAGAGGAAGAGAACAAAAGTCGATTCCACTTGCTAATTTTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAATAAGAGGAAGAGAACAAAAGTCGATTCCACTTGCTAATTTTGC  850

seq1  TTAGGGCTTTGCACAGATGTGCTCTATCATCTGAAGTAGACTCTGCAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGCTTTGCACAGATGTGCTCTATCATCTGAAGTAGACTCTGCAGGA  900

seq1  TGAACTGAACAGAATGACATGGATC-AAGGTTTCCAGGAATGCTTCAGGT  949
      ||||||| ||||||||||||||||| ||||||||||||||||||||| ||
seq2  TGAACTG-ACAGAATGACATGGATCAAAGGTTTCCAGGAATGCTTCA-GT  948

seq1  ACACTGTAGGAGACAACAGAAAGGATATAATCAAATCACAGAGACATGGT  999
      |||||||||||||| ||||||||||||| |||||||||||||||||||||
seq2  ACACTGTAGGAGAC-ACAGAAAGGATAT-ATCAAATCACAGAGACATGGT  996

seq1  ATGAACTTGCCTATATTTGCAGTTAGTTCACACTGTCCACAGATCATTAT  1049
      |||||||||||||||||||||||||||||||||||| ||||||||| |||
seq2  ATGAACTTGCCTATATTTGCAGTTAGTTCACACTGT-CACAGATCA-TAT  1044

seq1  GAATCTCATTAGGTCATTACTGTACCCATGTCTTAGGGTTTCCATTACTT  1099
      | |||||||   |||| ||||||||||||||||   ||||||   |||||
seq2  G-ATCTCAT--AGTCA-TACTGTACCCATGTCT--AGGTTTC--ATACTT  1086

seq1  CAAAGAAGCC  1109
      | ||||||||
seq2  C-AAGAAGCC  1095