BAC Information

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BAC

Clone NameB6Ng01-323M06
Chromosome12 (Build37)12 (Build37)
Map Location 22,745,838 - 22,746,63517,928,181 - 17,929,209
singlet/doubletsingletsinglet
Overlap geneEG668660
Upstream gene6030426L16Rik, LOC434693, EG668645, EG668646, LOC100043416, LOC668650, EG668496, LOC668653, EG432637, LOC668656, EG629133
Downstream geneEG668662, LOC668664, 2410018L13Rik, LOC77114, EG668669, EG668670, LOC668680, LOC100042895, LOC100043435
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323M06.bB6Ng01-323M06.g
ACCGA112260GA112261
length7991,103
definitionB6Ng01-323M06.b B6Ng01-323M06.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(22,745,838 - 22,746,635)(17,928,181 - 17,929,209)
sequence
gaattcagaggacaacttgtggaagctggttctcttttcctaccatgtgg
gtcttagggattgaagccaggctgccaggcttcgtagcaagcacctttac
ccacagagtcagcccactggaccaaatacagagatggtttagagcatgga
gcaggaaggatgcagggtgcacataagcaccgctcctgtgaagaactgac
tgctgactcatcctttactgtgtcattctgatttctataggaagccctac
agacagctaatgtgtgtgtatgctatacatgtgtatgctatacatgtgtg
tgcaaaggccaaacaggaatacaagtgttcacaagattcccttttctcta
tcactgaacccggccggggcttaccattgtagctaggctgcctgctcagc
aagcttctgggactcactcttccccttgttctagggttttcgggcagctc
agccactcctggcttttccgtgggtgttgggatcagaactcagatcctca
tgctgggtatcaagtgttcttcaacactgagccattttcccacttcttgc
tttgagaattcttaatcacctatctgagcctcagatctcattagaggata
aaaaaaaaaaaaagacccgttttatagaattgtgtgaataaacctgatgg
atgagctcagctggggcctgatgtccagcaagcaatcgatagatgcttgg
cttttatcgttactctctgcaaagacaggcagtcctttagtacaccaggt
agcaagtgggtagaggaatgacctggtgtatggggttgggggatagggg
gaattcttaattcttaattagcaccacagcagccttatagtaggacgtta
aaactttgaggtgaatgaggatgattttacattaatgtttattcttgcca
aagaatagctgtggacacatttaataacaataactagaatatgtagctaa
tatttgattaccaccaattacaatcgatacaaatagattacagaagtttc
ctctcctttctgttaaagcctttttggttctcaccagttaatttgaatct
cacttgatagcacctaacaaaggcttaggttctcctgtggtgagtttaag
gtgaggtcttagccaattaacatctcctggaagcttttgaaaataaaatt
ttgaagcaagtttgtaccacaattttccagtataactaaaaccctaaata
ttaaaaaagatattgtctctgaatcttatggagcaacaattatttctcag
aactttaaagctcactgtgtgaaaacaaagatttgaagtaaacttctctt
tagaggcattagctaataaaatattttccacttaggaaacaatatacact
gaaagattcaaagtcttagcttcttgtattgaagcctgagcccgtcacag
atctttactgctgtctcagtgcatccaggcgagctaaaatgaggtccctc
atattgaatattttatccaggtctctgttaggcatctatgggcaagtgcc
aggaagcatctatgaggcatgcagcatttgtgggctccacttagcaggtt
catgaaagtgagcattaaaagatcatggctttgacaaccactttattggc
caagagtttctttgcgtaccagctaaaggcgccttggaacctcattgcct
ctcagatgttagcaggaagggcccaggatagatcaaaacccaaaggacag
agcccagctctaacctagtctttttctttctcaatgggactcattctgct
aactcctagctgagccacgtgagacggctaccactccctggaggctctgt
catctccacatcccctctgggcatacaagtttgactctaatcatcttctg
cagaagcacctagtctctgctagatgtgccattgaagtgcaaggcactcg
aga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_22745838_22746635
seq2: B6Ng01-323M06.b_51_849 (reverse)

seq1  CCCCTAT-CCCCAACCCCATACACCAGGTCATTCCTCTACCCACTTGCTA  49
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTATCCCCCAACCCCATACACCAGGTCATTCCTCTACCCACTTGCTA  50

seq1  CCTGGTGTACTAAAGGACTGCCTGTCTTTGCAGAGAGTAACGATAAAAGC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTGTACTAAAGGACTGCCTGTCTTTGCAGAGAGTAACGATAAAAGC  100

seq1  CAAGCATCTATCGATTGCTTGCTGGACATCAGGCCCCAGCTGAGCTCATC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATCTATCGATTGCTTGCTGGACATCAGGCCCCAGCTGAGCTCATC  150

seq1  CATCAGGTTTATTCACACAATTCTATAAAACGGGTCTTTTTTTTTTTTTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGGTTTATTCACACAATTCTATAAAACGGGTCTTTTTTTTTTTTTT  200

seq1  ATCCTCTAATGAGATCTGAGGCTCAGATAGGTGATTAAGAATTCTCAAAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTAATGAGATCTGAGGCTCAGATAGGTGATTAAGAATTCTCAAAG  250

seq1  CAAGAAGTGGGAAAATGGCTCAGTGTTGAAGAACACTTGATACCCAGCAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAGTGGGAAAATGGCTCAGTGTTGAAGAACACTTGATACCCAGCAT  300

seq1  GAGGATCTGAGTTCTGATCCCAACACCCACGGAAAAGCCAGGAGTGGCTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATCTGAGTTCTGATCCCAACACCCACGGAAAAGCCAGGAGTGGCTG  350

seq1  AGCTGCCCGAAAACCCTAGAACAAGGGGAAGAGTGAGTCCCAGAAGCTTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCCCGAAAACCCTAGAACAAGGGGAAGAGTGAGTCCCAGAAGCTTG  400

seq1  CTGAGCAGGCAGCCTAGCTACAATGGTAAGCCCCGGCCGGGTTCAGTGAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCAGGCAGCCTAGCTACAATGGTAAGCCCCGGCCGGGTTCAGTGAT  450

seq1  AGAGAAAAGGGAATCTTGTGAACACTTGTATTCCTGTTTGGCCTTTGCAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAAGGGAATCTTGTGAACACTTGTATTCCTGTTTGGCCTTTGCAC  500

seq1  ACACATGTATAGCATACACATGTATAGCATACACACACATTAGCTGTCTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGTATAGCATACACATGTATAGCATACACACACATTAGCTGTCTG  550

seq1  TAGGGCTTCCTATAGAAATCAGAATGACACAGTAAAGGATGAGTCAGCAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCTTCCTATAGAAATCAGAATGACACAGTAAAGGATGAGTCAGCAG  600

seq1  TCAGTTCTTCACAGGAGCGGTGCTTATGTGCACCCTGCATCCTTCCTGCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCTTCACAGGAGCGGTGCTTATGTGCACCCTGCATCCTTCCTGCT  650

seq1  CCATGCTCTAAACCATCTCTGTATTTGGTCCAGTGGGCTGACTCTGTGGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTCTAAACCATCTCTGTATTTGGTCCAGTGGGCTGACTCTGTGGG  700

seq1  TAAAGGTGCTTGCTACGAAGCCTGGCAGCCTGGCTTCAATCCCTAAGACC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTGCTTGCTACGAAGCCTGGCAGCCTGGCTTCAATCCCTAAGACC  750

seq1  CACATGGTAGGAAAAGAGAACCAGCTTCCACAAGTTGTCCTCTGAATTC  798
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGTAGGAAAAGAGAACCAGCTTCCACAAGTTGTCCTCTGAATTC  799

seq1: chr12_17928181_17929209
seq2: B6Ng01-323M06.g_157_1169

seq1  ATTCTTGCCAAAGAATAGCTGTGGACACATTTAATAACAATAACTAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGCCAAAGAATAGCTGTGGACACATTTAATAACAATAACTAGAAT  50

seq1  ATGTAGCTAATATTTGATTACCACCAATTACAATCGATACCAATAGATTA  100
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATGTAGCTAATATTTGATTACCACCAATTACAATCGATACAAATAGATTA  100

seq1  CAGAAGTTTCCTCTCCTTTCTGTTAATGCCTTTTTGGTTCTCACCAGTTA  150
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CAGAAGTTTCCTCTCCTTTCTGTTAAAGCCTTTTTGGTTCTCACCAGTTA  150

seq1  ATTTGAATCTCACTTGATAGCACCTAACAAAGGCTTAGGTTCTCCTGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAATCTCACTTGATAGCACCTAACAAAGGCTTAGGTTCTCCTGTGG  200

seq1  TGAGTTTAAGGTGAGGTCTTAGCCAATTAACATATCCTGGAAGCTTTTGA  250
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGAGTTTAAGGTGAGGTCTTAGCCAATTAACATCTCCTGGAAGCTTTTGA  250

seq1  AAATAAAATTTTGAAGCAAGTTTGTACCACAATTTTCCAGTATAACTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAATTTTGAAGCAAGTTTGTACCACAATTTTCCAGTATAACTAAA  300

seq1  ACCCTAAATATTAAAAAAGATATTGTCTCTGAATCTTATGGAGCAACAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTAAATATTAAAAAAGATATTGTCTCTGAATCTTATGGAGCAACAAT  350

seq1  TATTTCTCAGAACTTTAAAGCTCACTGTTTGAAAACAAAGATTTGAAGTA  400
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TATTTCTCAGAACTTTAAAGCTCACTGTGTGAAAACAAAGATTTGAAGTA  400

seq1  AACGTCTCTTTAGAGGCATTAGCTAATAAAATATTTTCCACTTAGGAAAC  450
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTCTTTAGAGGCATTAGCTAATAAAATATTTTCCACTTAGGAAAC  450

seq1  AATATACACTGAAAGATTCAAAGTCTTAGCTTCTTGTTTTGAAGCCTGAG  500
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AATATACACTGAAAGATTCAAAGTCTTAGCTTCTTGTATTGAAGCCTGAG  500

seq1  CCCGTCACAGATCTTTACTGCTGTCTCAGTGCATCCAGGAGAGCTAAAAT  550
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CCCGTCACAGATCTTTACTGCTGTCTCAGTGCATCCAGGCGAGCTAAAAT  550

seq1  GAGGTCCCTCATATTAAATATTTTATCCAGGTCTCTGTTAGGCATCTATG  600
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GAGGTCCCTCATATTGAATATTTTATCCAGGTCTCTGTTAGGCATCTATG  600

seq1  GGCAAGTGCCAGGAAGCATCTATGAGGCATGCAGCATTTGTGGGCTCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGTGCCAGGAAGCATCTATGAGGCATGCAGCATTTGTGGGCTCCAC  650

seq1  TTAGCAGGTTCATGAAAGTGAGCATTAAAAGATCATGGCTTTGACAACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAGGTTCATGAAAGTGAGCATTAAAAGATCATGGCTTTGACAACCA  700

seq1  CTTTATTGGCCAAGAGCTTCTTTGCGTACCAGCTAAAGGCACCTTGGAAC  750
      |||||||||||||||| ||||||||||||||||||||||| |||||||||
seq2  CTTTATTGGCCAAGAGTTTCTTTGCGTACCAGCTAAAGGCGCCTTGGAAC  750

seq1  CTCATTGCCTCTCAGGATGTTAGCAGGGAAGGGGCCCAGGATAGATCAAA  800
      |||||||||||||| ||||||||||||  | |||||||||||||||||||
seq2  CTCATTGCCTCTCA-GATGTTAGCAGG--AAGGGCCCAGGATAGATCAAA  797

seq1  ACCCAAAGGACAGAGCCCAGCTCTAACCTAGGTCTTTTCTTTCTCAATGG  850
      |||||||||||||||||||||||||||||||   ||||||||||||||||
seq2  ACCCAAAGGACAGAGCCCAGCTCTAACCTAGTCTTTTTCTTTCTCAATGG  847

seq1  GACTCATTCTGCTAACTCCTAGCTGAGCCACCTGAGACGGCTTACCACTC  900
      ||||||||||||||||||||||||||||||| ||||||||| ||||||||
seq2  GACTCATTCTGCTAACTCCTAGCTGAGCCACGTGAGACGGC-TACCACTC  896

seq1  CCTGGAGGCTCTGTCATCCTCCACCATCCCCTCTGGGCCTACAGTTTTGA  950
      ||||||||||||||||| ||||| |||||||||||||| ||||  |||||
seq2  CCTGGAGGCTCTGTCAT-CTCCA-CATCCCCTCTGGGCATACAAGTTTGA  944

seq1  CTCTAAATTCCATCTTCTTGGCCAGAGCACCTAGTTCTCCTGCCTAGGAA  1000
      ||||||    ||||||||  ||   ||||||||| ||| ||| ||||  |
seq2  CTCTAA---TCATCTTCT--GCAGAAGCACCTAG-TCT-CTG-CTAG--A  984

seq1  TGTGCCATTGTAGTGCAGGGCACTCGAGA  1029
      |||||||||| |||||| |||||||||||
seq2  TGTGCCATTGAAGTGCAAGGCACTCGAGA  1013