BAC Information

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BAC

Clone NameB6Ng01-324J13
Chromosome12 (Build37)
Map Location 64,481,669 - 64,637,901
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040438, 1700047L15Rik, Tspyl-ps, EG665741, EG382606
Downstream geneLOC435302, EG623046
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324J13.bB6Ng01-324J13.g
ACCGA112869GA112870
length1891,138
definitionB6Ng01-324J13.b B6Ng01-324J13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,637,713 - 64,637,901)(64,481,669 - 64,482,825)
sequence
ttttgtttatattggctctctattatagcttacaagtacagcacacagtg
aagtttctgggtgatttagtacaaagaacagatatttgttacattaccag
ccctgaatacatacatgtaaatagcattatatggacaaaacaggttattt
ataagaatgtatatatatatatatatatgtgtgtgtgtg
gaattcactactttcttatttttagtacaaatgaattagcaattgaaaag
attaaaatttgttgggatttcaaaaaaaaaaaaaaaagagtccatctcgc
actggtgagatggcttagtggttaagagcactggctgtttttccagagtt
cctgagttcacttcccaacaatcacatggtggctcacaaccatctatcag
gggaaactgatgccctcttcaggcaggcagttgtatatgcagcagagcac
acgtacattaaataaataaataaataaataaataaagtccatctcacagt
gataccacagagatcaacataagagccgagcacaggtggaaacacaatag
catccaactactgcatttctcttaggaaaaggatagtatttatagggaca
tttgtttaggttttcaagctatttctcaaaacaatatttttcttaatcaa
gttttagtgagctttaaaaggataaaaggatatatatcaagaaaatgatt
aacaaatggggatttaaggcctagggttattcctcggtcacagaggcctt
gcctaaaatatataaggcctggcatttaatccccaccaccagaaacaaaa
acagaagaggaaacaataaggagtaacactgaaacagcctcattgaaagt
caagataagcttaatcactaggactgttattgtaagcttgcatgtgtgtt
gaaaattctctaaaatctacaacaatgatgtctgccacttgataataaag
aaaatggaagcttatctaccaaaaaaaaaaaaacccacatataacatagt
tgctattagaaaacaatctatagtgttgtcaaagaaaatttacatcttat
tgagaatgtaatgtcatatctgttttgaccaagaagggatcagcttggta
aaataatttacttttacagcaacctatttaaagatccccctttttgtttg
ggttgagtttttttctctcaaaatatatccttgataaaattaggaaggtg
acttctcttttgaatccaatttgggttctacagaagcaagcatcagcatc
attagtaaaagctacagcacccacatgttgaaatggagtagaagaaagca
gggttatttaattgacgatatgtcagcaaaaaccctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_64637713_64637901
seq2: B6Ng01-324J13.b_50_238 (reverse)

seq1  CACACACACACATATATATATATATATATACATTCTTATAAATAACCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACATATATATATATATATATACATTCTTATAAATAACCTGT  50

seq1  TTTGTCCATATAATGCTATTTACATGTATGTATTCAGGGCTGGTAATGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCCATATAATGCTATTTACATGTATGTATTCAGGGCTGGTAATGTA  100

seq1  ACAAATATCTGTTCTTTGTACTAAATCACCCAGAAACTTCACTGTGTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATATCTGTTCTTTGTACTAAATCACCCAGAAACTTCACTGTGTGCT  150

seq1  GTACTTGTAAGCTATAATAGAGAGCCAATATAAACAAAA  189
      |||||||||||||||||||||||||||||||||||||||
seq2  GTACTTGTAAGCTATAATAGAGAGCCAATATAAACAAAA  189

seq1: chr12_64481669_64482825
seq2: B6Ng01-324J13.g_67_1204

seq1  GAATTCACTACTTTCTTATTTTTAGTACAAATGAATTAGCAATTGAAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTACTTTCTTATTTTTAGTACAAATGAATTAGCAATTGAAAAG  50

seq1  ATTAAAATTTGTTGGGATTTCAAAAAAAAAAAAAAAAGAGTCCATCTCGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAATTTGTTGGGATTTCAAAAAAAAAAAAAAAAGAGTCCATCTCGC  100

seq1  ACTGGTGAGATGGCTTAGTGGTTAAGAGCACTGGCTGTTTTTCCAGAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTGAGATGGCTTAGTGGTTAAGAGCACTGGCTGTTTTTCCAGAGTT  150

seq1  CCTGAGTTCACTTCCCAACAATCACATGGTGGCTCACAACCATCTATCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTTCACTTCCCAACAATCACATGGTGGCTCACAACCATCTATCAG  200

seq1  GGGAAACTGATGCCCTCTTCAGGCAGGCAGTTGTATATGCAGCAGAGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAACTGATGCCCTCTTCAGGCAGGCAGTTGTATATGCAGCAGAGCAC  250

seq1  ACGTACATTAAATAAATAAATAAATAAATAAATAAAGTCCATCTCACAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTACATTAAATAAATAAATAAATAAATAAATAAAGTCCATCTCACAGT  300

seq1  GATACCACAGAGATCAACATAAGAGCCGAGCACAGGTGGAAACACAATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCACAGAGATCAACATAAGAGCCGAGCACAGGTGGAAACACAATAG  350

seq1  CATCCAACTACTGCATTTCTCTTAGGAAAAGGATAGTATTTATAGGGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAACTACTGCATTTCTCTTAGGAAAAGGATAGTATTTATAGGGACA  400

seq1  TTTGTTTAGGTTTTCAAGCTATTTCTCAAAACAATATTTTTCTTAATCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTAGGTTTTCAAGCTATTTCTCAAAACAATATTTTTCTTAATCAA  450

seq1  GTTTTAGTGAGCTTTAAAAGGATAAAAGGATATATATCAAGAAAATGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAGTGAGCTTTAAAAGGATAAAAGGATATATATCAAGAAAATGATT  500

seq1  AACAAATGGGGATTTAAGGCCTAGGGTTATTCCTCGGTCACAGAGGCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATGGGGATTTAAGGCCTAGGGTTATTCCTCGGTCACAGAGGCCTT  550

seq1  GCCTAAAATATATAAGGCCTGGCATTTAATCCCCACCACCAGAAACAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAAAATATATAAGGCCTGGCATTTAATCCCCACCACCAGAAACAAAA  600

seq1  ACAGAAGAGGAAACAATAAGGAGTAACACTGAAACAGCCTCATTGAAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGAGGAAACAATAAGGAGTAACACTGAAACAGCCTCATTGAAAGT  650

seq1  CAAGATAAGCTTAATCACTAGGACTGTTATTGTAAGCTTGCATGTGTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATAAGCTTAATCACTAGGACTGTTATTGTAAGCTTGCATGTGTGTT  700

seq1  GAAAATTCTCTAAAATCTACAACAATGATGTCTGCCACTTGATAATAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTCTCTAAAATCTACAACAATGATGTCTGCCACTTGATAATAAAG  750

seq1  AAAATGGAAGCTTATCTACCAAAAAAAAAAAAACCCACATATAACATAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGAAGCTTATCTACCAAAAAAAAAAAAACCCACATATAACATAGT  800

seq1  TGCTATTAGAAAACAATCTATAGTGTTGTCAAAGAAAATTTACATCTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATTAGAAAACAATCTATAGTGTTGTCAAAGAAAATTTACATCTTAT  850

seq1  TGAGAATGTAATGTCATATCTGTTTTGACCAAGAAGGGATCAGCTTGGT-  899
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGAGAATGTAATGTCATATCTGTTTTGACCAAGAAGGGATCAGCTTGGTA  900

seq1  AAATAATTTACTTTTACAGCAACCTATTTAAAAGATCCCCCTTTTTGTTT  949
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AAATAATTTACTTTTACAGCAACCTATTT-AAAGATCCCCCTTTTTGTTT  949

seq1  TGGTTGAGTTTTTTCTCCTCAAAAATATTATCCTTGATAAAATTAGGAAG  999
       |||||||||||||   ||| |||||| ||||||||||||||||||||||
seq2  GGGTTGAGTTTTTTTCTCTC-AAAATA-TATCCTTGATAAAATTAGGAAG  997

seq1  GTGACTTCCTCTTTTTGAATCCAATTTTGGTTCCTACAGGAAGCAAAGCA  1049
      ||||||| ||| ||||||||||||||| |||| ||||| ||||| |||||
seq2  GTGACTT-CTC-TTTTGAATCCAATTTGGGTT-CTACA-GAAGC-AAGCA  1042

seq1  TCAGCAATCATTAGTAAAAAGCTACAAGGCA-CCACATGTTGAAAATGAG  1098
      ||||| ||||||||| ||||||||||  ||| |||||||||||||  |||
seq2  TCAGC-ATCATTAGT-AAAAGCTACA--GCACCCACATGTTGAAATGGAG  1088

seq1  TAGAAAGAAAAGCA-GGTTATTTAAATTGAAAGGAAATATGTCAAGAAAA  1147
      |||||   |||||| |||||||| ||||||      |||||||   |  |
seq2  TAGAA--GAAAGCAGGGTTATTT-AATTGA----CGATATGTC---AGCA  1128

seq1  AAAACACTAC  1157
      ||||| ||||
seq2  AAAACCCTAC  1138