MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-325K10
Chromosome	12 (Build37)
Map Location	103,408,230 - 103,430,244
singlet/doublet	doublet
Overlap gene	Slc24a4
Upstream gene	Mylf-ps, 4932415G16Rik, Mtac2d1, Fbln5, Trip11, Atxn3, LOC100040305, LOC100040297, Cpsf2
Downstream gene	Rin3, Lgmn, Golga5, Chga, Itpk1, Moap1, D230037D09Rik, 5730410I19Rik, Btbd7, EG634678, Cox8c, 9030205A07Rik, LOC667269
Link	Open Mouse BAC browser

Click to get alignment info.

name	Mylf-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17902 MGI:97270
definition	note : myosin light chain, alkali, fast skeletal muscle, pseudogene pseudo : _no_value

name	4932415G16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:271036 MGI:2443988
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mtac2d1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74413 MGI:1921663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Fbln5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23876 MGI:1346091
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Trip11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109181 MGI:1924393
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 46 ESTs, 4 Proteins

name	Atxn3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110616 MGI:1099442
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040305 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040305
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs

name	LOC100040297 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040297
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs

name	Cpsf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:51786 MGI:1861601
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc24a4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238384 MGI:2447362
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rin3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217835 MGI:2385708
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lgmn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19141 MGI:1330838
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Golga5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27277 MGI:1351475
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chga (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12652 MGI:88394
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itpk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217837 MGI:2446159
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Moap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64113 MGI:1915555
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D230037D09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320351 MGI:2443862
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5730410I19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66622 MGI:1913872
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Btbd7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238386 MGI:1917858
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG634678 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:634678 MGI:3646528
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 mRNAs, 1359 ESTs, 8 Proteins pseudo : _no_value

name	Cox8c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75483 MGI:1922733
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9030205A07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217843 MGI:2684729
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667269 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667269
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 147 ESTs, 4 Proteins pseudo : _no_value

name	4932415G16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27370535 GeneID:271036 MGI:2443988
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4932415G16 gene transcript_id : NM_173023.1

name	Mtac2d1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:131889847 GeneID:74413 MGI:1921663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : membrane targeting (tandem) C2 domain containing 1 transcript_id : NM_001082976.1

name	Mtac2d1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:131888111 GeneID:74413 MGI:1921663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : membrane targeting (tandem) C2 domain containing 1 transcript_id : NM_028924.2

name	Fbln5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130029 GeneID:23876 MGI:1346091
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibulin 5 transcript_id : NM_011812.3

name	Trip11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263492 GeneID:109181 MGI:1924393
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 46 ESTs, 4 Proteins product : thyroid hormone receptor interactor 11, transcript variant 3 transcript_id : XM_001001171.2

name	Atxn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802862 GeneID:110616 MGI:1099442
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ataxin 3 transcript_id : NM_029705.2

name	LOC100040305 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263497 GeneID:100040305
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs product : hypothetical protein LOC100040305 transcript_id : XM_001474563.1

name	LOC100040297 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263493 GeneID:100040297
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs product : hypothetical protein LOC100040297 transcript_id : XM_001474546.1

name	Cpsf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542417 GeneID:51786 MGI:1861601
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cleavage and polyadenylation specific factor 2 transcript_id : NM_016856.2

name	Slc24a4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130080 GeneID:238384 MGI:2447362
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 24 (sodium/potassium/calcium exchanger), member 4 transcript_id : NM_172152.2

name	Rin3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801790 GeneID:217835 MGI:2385708
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Ras and Rab interactor 3 transcript_id : NM_177620.3

name	Lgmn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130389 GeneID:19141 MGI:1330838
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : legumain transcript_id : NM_011175.2

name	Golga5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560499 GeneID:27277 MGI:1351475
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : golgi autoantigen, golgin subfamily a, 5 transcript_id : NM_013747.2

name	Chga (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680931 GeneID:12652 MGI:88394
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chromogranin A transcript_id : NM_007693.1

name	Itpk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142343814 GeneID:217837 MGI:2446159
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inositol 1,3,4-triphosphate 5/6 kinase transcript_id : NM_172584.2

name	Moap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376503 GeneID:64113 MGI:1915555
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : modulator of apoptosis 1 transcript_id : NM_022323.4

name	D230037D09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342894 GeneID:320351 MGI:2443862
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D230037D09 gene transcript_id : NM_177140.2

name	5730410I19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354569 GeneID:66622 MGI:1913872
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5730410I19 gene transcript_id : NM_025666.2

name	Btbd7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31044480 GeneID:238386 MGI:1917858
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BTB (POZ) domain containing 7 transcript_id : NM_172806.2

name	Cox8c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84794656 GeneID:75483 MGI:1922733
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome c oxidase, subunit VIIIc transcript_id : NM_001039049.1

name	9030205A07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486611 GeneID:217843 MGI:2684729
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9030205A07 Gene transcript_id : NM_001081017.1

name	4932415G16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370536 CCDS:CCDS26112.1 GeneID:271036 MGI:2443988
definition	codon_start : 1 exception : mismatches in translation note : CatSper channel subunit beta product : hypothetical protein LOC271036 protein_id : NP_766611.1

name	Mtac2d1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:131889848 GeneID:74413 MGI:1921663
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] codon_start : 1 product : membrane targeting (tandem) C2 domain containing 1 protein_id : NP_001076445.1

name	Mtac2d1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312724 GeneID:74413 MGI:1921663
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] codon_start : 1 product : membrane targeting (tandem) C2 domain containing 1 protein_id : NP_083200.1

name	Fbln5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753824 GeneID:23876 MGI:1346091
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 product : fibulin 5 protein_id : NP_035942.1

name	Trip11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94393032 GeneID:109181 MGI:1924393
definition	codon_start : 1 product : thyroid hormone receptor interactor 11 isoform 3 protein_id : XP_001001171.1

name	Atxn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859736 CCDS:CCDS26115.1 GeneID:110616 MGI:1099442
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : Machado-Joseph disease (spinocerebellar ataxia 3, olivopontocerebellar ataxia 3, autosomal dominant, ataxin 3) homolog product : ataxin 3 protein_id : NP_083981.1

name	LOC100040305 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263498 GeneID:100040305
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474613.1

name	LOC100040297 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263494 GeneID:100040297
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474596.1

name	Cpsf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8393762 CCDS:CCDS26116.1 GeneID:51786 MGI:1861601
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA] codon_start : 1 note : cleavage and polyadenylation specificity factor; cleavage and polyadenylation specific factor 2, 100kD subunit product : cleavage and polyadenylation specific factor 2 protein_id : NP_058552.1

name	Slc24a4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:26024351 CCDS:CCDS26117.1 GeneID:238384 MGI:2447362
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IC] GO_function : GO:0015297 - antiporter activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0008273 - calcium, potassium:sodium antiporter activity [Evidence ISS]; GO:0005432 - calcium:sodium antiporter activity [Evidence ISS]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : K-dependent Na/Ca exchanger NCKX4 product : solute carrier family 24 (sodium/potassium/calcium exchanger), member 4 protein_id : NP_742164.1

name	Rin3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244002 CCDS:CCDS26118.1 GeneID:217835 MGI:2385708
definition	GO_function : GO:0005096 - GTPase activator activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : Ras and Rab interactor 3 protein_id : NP_808288.1

name	Lgmn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7242187 CCDS:CCDS26119.1 GeneID:19141 MGI:1330838
definition	GO_component : GO:0045177 - apical part of cell [Evidence IDA]; GO:0005770 - late endosome [Evidence IDA]; GO:0005764 - lysosome [Evidence IEA] GO_function : GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0001509 - legumain activity [Evidence IMP]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0040015 - negative regulation of body size [Evidence IMP]; GO:0006508 - proteolysis [Evidence IDA] codon_start : 1 note : protease, cysteine, 1; preprolegumain product : legumain protein_id : NP_035305.1

name	Golga5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305095 GeneID:27277 MGI:1351475
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence ISS]; GO:0000139 - Golgi membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence ISS] GO_process : GO:0007030 - Golgi organization and biogenesis [Evidence ISS]; GO:0048193 - Golgi vesicle transport [Evidence ISS] codon_start : 1 product : golgi autoantigen, golgin subfamily a, 5 protein_id : NP_038775.1

name	Chga (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680932 CCDS:CCDS26120.1 GeneID:12652 MGI:88394
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 product : chromogranin A protein_id : NP_031719.1

name	Itpk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789389 CCDS:CCDS26121.1 GeneID:217837 MGI:2446159
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0047325 - inositol tetrakisphosphate 1-kinase activity [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : inositol 1,3,4-triphosphate 5/6 kinase protein_id : NP_766172.1

name	Moap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11612503 CCDS:CCDS26122.1 GeneID:64113 MGI:1915555
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0006915 - apoptosis [Evidence ISS] codon_start : 1 product : MAP-1 protein protein_id : NP_071718.1

name	D230037D09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893105 GeneID:320351 MGI:2443862
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : hypothetical protein LOC320351 protein_id : NP_796114.1

name	5730410I19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789154 CCDS:CCDS26124.1 GeneID:66622 MGI:1913872
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : hypothetical protein LOC66622 protein_id : NP_079942.1

name	Btbd7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31044481 CCDS:CCDS26125.1 GeneID:238386 MGI:1917858
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : BTB (POZ) domain containing 7 protein_id : NP_766394.2

name	Cox8c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84794657 GeneID:75483 MGI:1922733
definition	GO_component : GO:0005739 - mitochondrion [Evidence ISS] codon_start : 1 product : cytochrome c oxidase subunit 8C protein_id : NP_001034138.1

name	9030205A07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486612 GeneID:217843 MGI:2684729
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC217843 protein_id : NP_001074486.1

name	EG634678 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149263507 GeneID:634678 MGI:3646528
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 mRNAs, 1359 ESTs, 8 Proteins product : predicted gene, EG634678 pseudo : _no_value transcript_id : XR_002093.2

name	LOC667269 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263510 GeneID:667269
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 147 ESTs, 4 Proteins product : similar to ribosomal protein pseudo : _no_value transcript_id : XR_032025.1

clone name	MSMg01-115N13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-536F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149E05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-468N24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-078P15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-093D07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-541K20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-523C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479E21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-394L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021M16
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-325K10.b	B6Ng01-325K10.g
ACC	GA113657	GA113658
length	1,205	1,125
definition	B6Ng01-325K10.b	B6Ng01-325K10.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(103,408,230 - 103,409,460)	(103,429,109 - 103,430,244)
sequence	gaattcccattgcctttggaagcaattgagggttcactgcaaagagaagg aagctgggagcatatggaagaatgtaattaagagggagtatacattagat tgccaatacctgtggtccctttccccatctcagccaaccagtggccaggt ctggttcctgccaggagactagaaaattcttctctgggaggactgctcag cctgagtgaagaactctacagaccctttctccagagatatctaccaaagt ctcttcatcaccctattacaaggtctgtcgccaccaacttcaccaacaca cacctagagctggctggaatacctcatgaagaaccaagaaaggcatgacc tcatgaatccaagacaaacagcttttattcaccaagctattcggacatat tgtagacagcaaacatgaagctctgggacacccttcaaccccaggataaa acccgcacccacaaaataatcacttaacaaaacaatggcattgaaattgc ctgccttccccccacccccctcacacactgttataactgccaagagaaac aacttgaaggcgacattcatgaagggtgggagatgaaagctgagaaccac atgatgccggaaggaaagcaggctttgtcttccccatggaatatactctt gctgggctttggcaaacccatatgtgtggtgctgtatattgggctggact ggagacctcaaaggtgtcgttgagaagagtaagaagatctccagaacaaa agggccagtagagtgagccccaccaaacacaatgggagcctcgagaccag gaagcatgccctggtgaatctattgaacagctcagcaaagccaatgtgtg gtgcagagaagatgcgggcaatcccccctccccccactgaccaacccagt aaagagctcatgactattggctcaatatgcttggggggaaattggagaat tctggatgtggagctatgcaagatcactaaaattaaagtccttgtcagtc cacaatgtggtagatggtggcagagatgtcagcttcaatgtcatggtaca ttggggtgttatgctttgttggaggcctgtctgggattgaggcatctgct acctcctggttctattcacaggatggctgcaggtagtcactcatatctat gattaaggaggcaatctctacctcacgtcattggaaggaatagtctgcaa ttgcc	gaattcctgctccagaggctggcataaggagctgaggaagagtccaggtt tcatgagcaatagaacagctgccactgaaacatgtctcccagtagccttc tctccaaaactgttcataggtgaccacatatctcgcactccccagtgatg cccactccagctctgagctggtgccagcctcatctcttttgggtctaatg tgattgggccagtctggtcttcagaggcccttcatggcttttactgaccc aaagatgagatcacttagttcagcactaaaacagcctgtgaccattagct tccaacacatttggcaaccctgatgcccaattttggatgttgacctgagt ggatcaatggatatgtggacaactggggctgccgagatgatgggtgtttg gcatccattcatcactcggtttggttttatggtttgttctcagtaggggt actgaggggtcagggcctattgggagacaaatcccatacattctataggt tcaaaatcccagtgtgttagtgcaccagtgttgcaagtgagaagagtttt ggtaggaaagacctttctatgggtgaatgcataggttacctttactgatc cccagcatgttgattctgggtcacaccaaacagaacacacacacatacac cacacaccacacaccctcccctgctccaagagctgtgggagagccctgtg acagaccattgccttaacacttgtaaggccttgggtttgatccttcatac tccaaaatgtaaagaaaattgatttgatgctagcctgcagaggctcacgc tccacagctctgctcaccttctcacacatgcaaagctcttccctcgtcgc cagtcggcaagagagtgaaggaagcgactcttgactcattacagatccat tttcaagccaaagacacaaacccaaataactctaggccgtgatggttcac ttagtcacagatggccacaagcaaagtgactcagctggagccaggcggga acagcaggtgccgggcacagagcgctggctcctgtgctgtgggagtctca gaatagacactctgcattcccaagtacactcagcagccactctggtggat tcacactaggctcacgacaagcagc
quality values	Open. Hide. 58 47 34 41 62 62 62 37 27 62 62 62 62 62 62 62 62 62 49 62 62 62 62 56 62 59 62 62 62 59 62 35 62 62 59 45 59 62 62 59 62 62 62 62 54 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 42 49 54 42 49 62 62 62 59 62 62 62 62 59 62 62 59 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 54 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 54 53 58 58 58 54 58 58 54 58 58 58 58 58 58 58 58 58 46 54 54 58 58 54 58 58 58 54 58 58 58 58 58 54 58 54 53 58 58 58 58 48 45 35 58 58 58 58 54 51 58 58 58 50 58 45 38 54 51 54 51 58 58 46 51 58 53 58 54 58 58 51 40 58 58 58 54 52 51 51 42 58 52 58 58 58 58 51 58 58 51 48 58 58 48 40 43 58 58 58 41 41 50 51 50 58 54 58 51 58 58 53 53 58 58 51 50 58 58 53 51 39 42 47 58 44 42 58 54 51 58 51 51 58 49 58 51 58 46 34 58 39 51 58 50 49 50 52 47 49 58 58 58 50 52 58 49 49 31 50 58 44 44 32 41 23 51 53 53 30 54 52 42 51 34 54 45 53 39 47 51 42 54 35 53 53 32 54 32 38 32 50 37 47 49 37 35 28 52 49 40 47 31 35 49 30 41 28 54 54 37 26 54 39 31 34 32 37 42 42 31 54 32 37 52 45 32 37 54 54 44 36 37 46 32 54 49 35 40 41 37 41 42 49 49 51 31 20 42 49 32 35 29 32 31 31 22 40 32 36 35 41 33 30 31 25 32 34 31 49 40 31 42 32 31 34 42 32 31 42 39 31 32 52 35 29 31 31 28 36 30 30 31 38 23 38 36 46 43 30 31 30 11 30 30 45 39 45 36 31 45 30 31 29 31 18 51 20 32 32 15 34 21 35 25 31 51 31 29 26 26 35 33 41 41 41 37 24 29 27 46 46 36 33 17 16 27 31 31 30 22 37 25 27 26 46 30 31 32 30 32 48 38 34 42 21 26 27 26 32 31 31 23 16 31 19 25 35 39 21 22 38 31 27 25 29 19 26 31 27 28 32 31 48 48 48 46 28 25 48 25 20 18 16 21 32 22 31 28 28 35 34 33 32 31 22 19 12 5 5 7 21 19 34 34 24 29 27 31 21 21 13 33 24 21 27 25 31 31 47 47 29 21 25 25 47 15 22 31 21 17 15 17 30 17 27 31 24 27 26 19 23 29 18 24 11 12 9 4 9 4 25 18 21 17 32 31 14 16 28 14 21 14 34 10 14 12 22 18 24 27 21 34 23 21 25 15 19 18 21 12 27 22 22 23 23 4 4 26 22 21 17 18 48 39 14 11 21 13 9 7 20 9 18 16 31 22 14 7 11 24 10 28 10 22 10 14 13 5 4 4 8 10 27 31 5 16 10 8 7 3 5 15 20 21 9 3 9 24 8 7 23 10 18 12 24 6 15 7 3 3 4 8 7 5 8 28 5 5 15 7 8 23 6 4 5 22 6 10 16 13 16 17 5 22 9 13 18 6 5 3 2 7 6 3 5 6 19 11 4 5 13 4 6 9 3 2 5 13 5 18 5 8 4 6 4 5 7 10 24 4 3 5 3 3 1 3 3 3 1 3 8 7 7 16 6 8 9 15 10 7 10 6 10 16 20 7 19 14 11 12 10 4 17 21	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr12_103408230_103409460
seq2: B6Ng01-325K10.b_43_1247

seq1  GAATTCCCATTGCCTTTGGAAGCAATTGAGGGTTCACTGCAAAGAGAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATTGCCTTTGGAAGCAATTGAGGGTTCACTGCAAAGAGAAGG  50

seq1  AAGCTGGGAGCATATGGAAGAATGTAATTAAGAGGGAGTATACATTAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGGAGCATATGGAAGAATGTAATTAAGAGGGAGTATACATTAGAT  100

seq1  TGCCAATACCTGTGGTCCCTTTCCCCATCTCAGCCAACCAGTGGCCAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAATACCTGTGGTCCCTTTCCCCATCTCAGCCAACCAGTGGCCAGGT  150

seq1  CTGGTTCCTGCCAGGAGACTAGAAAATTCTTCTCTGGGAGGACTGCTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTCCTGCCAGGAGACTAGAAAATTCTTCTCTGGGAGGACTGCTCAG  200

seq1  CCTGAGTGAAGAACTCTACAGACCCTTTCTCCAGAGATATCTACCAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTGAAGAACTCTACAGACCCTTTCTCCAGAGATATCTACCAAAGT  250

seq1  CTCTTCATCACCCTATTACAAGGTCTGTCGCCACCAACTTCACCAACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCATCACCCTATTACAAGGTCTGTCGCCACCAACTTCACCAACACA  300

seq1  CACCTAGAGCTGGCTGGAATACCTCATGAAGAACCAAGAAAGGCATGACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAGAGCTGGCTGGAATACCTCATGAAGAACCAAGAAAGGCATGACC  350

seq1  TCATGAATCCAAGACAAACAGCTTTTATTCACCAAGCTATTCGGACATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAATCCAAGACAAACAGCTTTTATTCACCAAGCTATTCGGACATAT  400

seq1  TGTAGACAGCAAACATGAAGCTCTGGGACACCCTTCAACCCCAGGATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACAGCAAACATGAAGCTCTGGGACACCCTTCAACCCCAGGATAAA  450

seq1  ACCCGCACCCACAAAATAATCACTTAACAAAACAATGGCATTGAAATTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGCACCCACAAAATAATCACTTAACAAAACAATGGCATTGAAATTGC  500

seq1  CTGCCTTCCCCCCACCCCCCTCACACACTGTTATAACTGCCAAGAGAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTCCCCCCACCCCCCTCACACACTGTTATAACTGCCAAGAGAAAC  550

seq1  AACTTGAAGGCGACATTCATGAAGGGTGGGAGATGAAAGCTGAGAACCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGAAGGCGACATTCATGAAGGGTGGGAGATGAAAGCTGAGAACCAC  600

seq1  ATGATGCCGGAAGGAAAGCAGGCTTTGTCTTCCCCATGGAATATACTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGCCGGAAGGAAAGCAGGCTTTGTCTTCCCCATGGAATATACTCTT  650

seq1  GCTGGGCTTTGGCAAACCCATATGTGTGGTGCTGTATATTGGGCTGGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGCTTTGGCAAACCCATATGTGTGGTGCTGTATATTGGGCTGGACT  700

seq1  GGAGACCTCAAAGGTGTCGTTGAGAAGAGTAAGAAGATCTCCAGAACAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACCTCAAAGGTGTCGTTGAGAAGAGTAAGAAGATCTCCAGAACAAA  750

seq1  AGGGCCAGTAGAGTGAGCCCCACCAAACACAATGGGAGCCTCGAGACCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCAGTAGAGTGAGCCCCACCAAACACAATGGGAGCCTCGAGACCAG  800

seq1  GAAGCATGCCCTGGTGAATCTATTGAACAGCTCAGCAAAGCCAATGTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCATGCCCTGGTGAATCTATTGAACAGCTCAGCAAAGCCAATGTGTG  850

seq1  GTGCAGAGAAGATGCGGGCAATCCCCCCTCCCCCCACTGACCAACCCAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGAGAAGATGCGGGCAATCCCCCCTCCCCCCACTGACCAACCCAGT  900

seq1  AAAGAGCTCATGACTATTGGCTCAATATGCTTGGGGGGAAATTGGAGAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCTCATGACTATTGGCTCAATATGCTTGGGGGGAAATTGGAGAAT  950

seq1  TCTGGATGT-GAGCTATGCAAGATCACTAAAATTAAAGTCCTTGTCAGTC  999
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATGTGGAGCTATGCAAGATCACTAAAATTAAAGTCCTTGTCAGTC  1000

seq1  CACAATGTGGGTAGATGGTGGCAGAGATGTCAGCTTCAATGTCATGGTTA  1049
      |||||||| |||||||||||||||||||||||||||||||||||||| ||
seq2  CACAATGT-GGTAGATGGTGGCAGAGATGTCAGCTTCAATGTCATGG-TA  1048

seq1  CATT-GGGTGTTATTGCTTTGTTGGAGGCCTGTTCTGGGTTTTGAAGGGC  1098
      |||| |||||||| |||||||||||||||||| ||||||  ||||  |||
seq2  CATTGGGGTGTTA-TGCTTTGTTGGAGGCCTG-TCTGGG-ATTGA--GGC  1093

seq1  ATCCTGCTACCTCCTGGTCTCTATCCACAAGATGCCTGCAGGGTAGTCAC  1148
      || ||||||||||||||| ||||| |||| |||| ||||| |||||||||
seq2  AT-CTGCTACCTCCTGGT-TCTATTCACAGGATGGCTGCA-GGTAGTCAC  1140

seq1  CTTCATATCTTAATGAATAAAAGGAAGGCATCTCTAAACCTTTCAAAGGT  1198
        ||||||||  |||| |  ||||| |  ||||||  ||||     | ||
seq2  --TCATATCT--ATGATT--AAGGAGGCAATCTCT--ACCT----CACGT  1178

seq1  TTCCTTTGGAAGGAGATAGTCTGCAAATTTGCC  1231
         | ||||||||| |||||||||||  |||||
seq2  ---CATTGGAAGGA-ATAGTCTGCAA--TTGCC  1205

seq1: chr12_103429109_103430244
seq2: B6Ng01-325K10.g_66_1190 (reverse)

seq1  GCTGCTTGTCGTTGAGCCTAGTGTGAAATCCACCAGAGTGGCTGGCTGAG  50
      ||||||||||| ||||||||||||| ||||||||||||||||| ||||||
seq2  GCTGCTTGTCG-TGAGCCTAGTGTG-AATCCACCAGAGTGGCT-GCTGAG  47

seq1  GTTGTACTTGGGAATGCAGAGGTGTCTATTCTGAGACTCCCACAGCACAG  100
        |||||||||||||||||| |||||||||||||||||||||||||||||
seq2  --TGTACTTGGGAATGCAGA-GTGTCTATTCTGAGACTCCCACAGCACAG  94

seq1  GAGCCAGCCGCCTTCTGTGCCCGGCACCTGCTGTTCCCGCCTGGCTCCAG  150
      ||||||| |||  |||||||||||||||||||||||||||||||||||||
seq2  GAGCCAG-CGC--TCTGTGCCCGGCACCTGCTGTTCCCGCCTGGCTCCAG  141

seq1  CCTGAGTCACTTTTGCTTGTGGCCATCTGTGACTAAGTGAACCATCACGG  200
       ||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  -CTGAGTCAC-TTTGCTTGTGGCCATCTGTGACTAAGTGAACCATCACGG  189

seq1  CCTAGAGTTATTTGGGTTTGTGTCTTTGGCTTGAAAATGGATCTGTAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAGTTATTTGGGTTTGTGTCTTTGGCTTGAAAATGGATCTGTAATG  239

seq1  AGTCAAGAGTCGCTTCCTTCACTCTCTTGCCGACTGGCGACGAGGGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAGAGTCGCTTCCTTCACTCTCTTGCCGACTGGCGACGAGGGAAGA  289

seq1  GCTTTGCATGTGTGAGAAGGTGAGCAGAGCTGTGGAGCCTGAGCCTCTGC  350
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GCTTTGCATGTGTGAGAAGGTGAGCAGAGCTGTGGAGCGTGAGCCTCTGC  339

seq1  AGGCTAGCATCAAATCAATTTTCTTTACATTTTGGAGTATGAAGGATCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAGCATCAAATCAATTTTCTTTACATTTTGGAGTATGAAGGATCAA  389

seq1  ACCCAAGGCCTTACAAGTGTTAAGGCAATGGTCTGTCACAGGGCTCTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGGCCTTACAAGTGTTAAGGCAATGGTCTGTCACAGGGCTCTCCC  439

seq1  ACAGCTCTTGGAGCAGGGGAGGGTGTGTGGTGTGTGGTGTATGTGTGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTCTTGGAGCAGGGGAGGGTGTGTGGTGTGTGGTGTATGTGTGTGT  489

seq1  GTTCTGTTTGGTGTGACCCAGAATCAACATGCTGGGGATCAGTAAAGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTTTGGTGTGACCCAGAATCAACATGCTGGGGATCAGTAAAGGTA  539

seq1  ACCTATGCATTCACCCATAGAAAGGTCTTTCCTACCAAAACTCTTCTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATGCATTCACCCATAGAAAGGTCTTTCCTACCAAAACTCTTCTCAC  589

seq1  TTGCAACACTGGTGCACTAACACACTGGGATTTTGAACCTATAGAATGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAACACTGGTGCACTAACACACTGGGATTTTGAACCTATAGAATGTA  639

seq1  TGGGATTTGTCTCCCAATAGGCCCTGACCCCTCAGTACCCCTACTGAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTTGTCTCCCAATAGGCCCTGACCCCTCAGTACCCCTACTGAGAA  689

seq1  CAAACCATAAAACCAAACCGAGTGATGAATGGATGCCAAACACCCATCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCATAAAACCAAACCGAGTGATGAATGGATGCCAAACACCCATCAT  739

seq1  CTCGGCAGCCCCAGTTGTCCACATATCCATTGATCCACTCAGGTCAACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGCAGCCCCAGTTGTCCACATATCCATTGATCCACTCAGGTCAACAT  789

seq1  CCAAAATTGGGCATCAGGGTTGCCAAATGTGTTGGAAGCTAATGGTCACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATTGGGCATCAGGGTTGCCAAATGTGTTGGAAGCTAATGGTCACA  839

seq1  GGCTGTTTTAGTGCTGAACTAAGTGATCTCATCTTTGGGTCAGTAAAAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTTTTAGTGCTGAACTAAGTGATCTCATCTTTGGGTCAGTAAAAGC  889

seq1  CATGAAGGGCCTCTGAAGACCAGACTGGCCCAATCACATTAGACCCAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGGGCCTCTGAAGACCAGACTGGCCCAATCACATTAGACCCAAAA  939

seq1  GAGATGAGGCTGGCACCAGCTCAGAGCTGGAGTGGGCATCACTGGGGAGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGAGGCTGGCACCAGCTCAGAGCTGGAGTGGGCATCACTGGGGAGT  989

seq1  GCGAGATATGTGGTCACCTATGAACAGTTTTGGAGAGAAGGCTACTGGGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGATATGTGGTCACCTATGAACAGTTTTGGAGAGAAGGCTACTGGGA  1039

seq1  GACATGTTTCAGTGGCAGCTGTTCTATTGCTCATGAAACCTGGACTCTTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGTTTCAGTGGCAGCTGTTCTATTGCTCATGAAACCTGGACTCTTC  1089

seq1  CTCAGCTCCTTATGCCAGCCTCTGGAGCAGGAATTC  1136
      ||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTCCTTATGCCAGCCTCTGGAGCAGGAATTC  1125

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information