BAC Information

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BAC

Clone NameB6Ng01-326P18
Chromosome12 (Build37)
Map Location 19,959,679 - 20,119,375
singlet/doubletdoublet
Overlap geneEG668600, LOC100042727, LOC673301
Upstream geneLOC668570, EG668413, LOC671401, EG546524, EG668584, EG544848, EG627871, LOC100042698, LOC629055, EG668588, LOC100042706, EG668594
Downstream geneEG668605, LOC668614, LOC100042751, LOC100043371, EG668455, LOC100042755, LOC100043377, LOC625810, 1700030C10Rik, 3110053B16Rik, LOC668698, LOC546752, EG629257, Ddef2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326P18.bB6Ng01-326P18.g
ACCGA114650GA114651
length941959
definitionB6Ng01-326P18.b B6Ng01-326P18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(20,118,852 - 20,119,375)(19,959,679 - 19,960,629)
sequence
gaattccaattaaagatatgtgccaccatgcctgaccagagggtattttc
ttttcttccttccttccttccttccttccttcctttctttctttctttct
ttctttctttctttctttctttctttctttctttctttctttctttcttt
ctttcttgttttgtttttttgagacagggtttctctgtataaccctggat
gtcctggaactcactttttagaccaggctgtcctcgaactcaaatccgcc
tgcctctacctcccaagtgctgggattaaaggcatgtgggccttgcccag
agagggtattttcttaactagtgattgtgaagcagagcccagcccattgt
aggtggtacaaccctgggctagtattctgagttctaaaagaaagaaggtt
gagcaagccatggggaacaagtcagtaattaccaaccctttcatggtctc
tgtatcagctcctgccttcaggttcctgccctgtttgagtcctgccctca
ctgcttttgatgatgaactgttatgtggaaactctgagtgaataaaccct
ttcctccccaagttgcttgtggccatggtgtgtcatcagagcaatggaaa
ccttaactcagacaacacggatgaagcctacagctcagagggtctactga
catgcccatggttatagagccctaggaagggtgcaggatgcaggctaggt
gtacctgaccctgaattctagtctccctccctcaatcagagctgaatcaa
gtgggctggaaaagggcagtcctgcatagggaagagagtgtatcccaaac
acctctgtgccatcaatagtttcacagggtcatctactcccctctcccca
ccccccacccctcccaattccctcctccaccccacctgctcacttcctgc
catgtttcctaccttcattgttttgtgtccatctgcctgaa
gaattcccattcggtttgtaccgtggtcaattccctatgcaaaacacgtg
cctttacccctggcttcttaaggctgtgagaaggagcacacacagaacat
gggtaatatcgctagaggtcatggctggtgcgaggtgggagtcccgcact
gcagcccaggagagggcgcgccctcgaaccacagcacgtagagaagggaa
acacaatgcggcggcccacaggcacgaacatgcctagaacacacatcgcc
ctctgtcctgcgggctccgcttccgggctgctgggtcgcggcgagcgtcc
cgattggcggccaggcctttgccccgcctcgcctggccggccaccgcccc
ctccccagcgcgtcccgcccctctccgcagaaggcaccggggcaagcggc
ctgttggcgcgcaattccagctggctgttcgcgctagcatcagggctcga
tctagaggacgcggcagccgcagctcctggagcacagcgggcagagctgc
gggctgcacgcgcacctgcagccaccgggcgtcccgcggaggctcccgcg
ccctgcggcgacttccgcgcccgcgctcccctttgtcaaagtccccaagc
ggcggcaggggcggcggcggggtcggagcccgcgccgtgggcgactgagg
cggccgcagtccgcgccccggcgccctggcgatgccggaccagatctctg
tgtcggaattcctggccgagacccttgaggactacaaggcgcccacggcc
tctagcttcaccacgcgcacggcccagtgccggaacaccgtggcggcggt
tcgaggaggtgagcggtagctttgcccgcgccgggaggggaggctagggc
ctcggggatcccgctaagccctggggcccgggctaggcttccgcggcctg
gtgcccgatatccagtggcccttccgcctgccgcccacaccccgggaaaa
gtttttggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_20118852_20119375
seq2: B6Ng01-326P18.b_467_991 (reverse)

seq1  TTCAGGCAGATGGACAC-AAACAATGAAGGTAGGAAACATGGCAGG-AGT  48
      ||||||||||||||||| |||||||||||||||||||||||||||| |||
seq2  TTCAGGCAGATGGACACAAAACAATGAAGGTAGGAAACATGGCAGGAAGT  50

seq1  GAGCAGGTGGGGTGGGAGGAGGGAATTGGGAGGGGGTGGGGGTGGGGAGA  98
      ||||||||||||| |||||||||||||||||||||  |||||||||||||
seq2  GAGCAGGTGGGGT-GGAGGAGGGAATTGGGAGGGGTGGGGGGTGGGGAGA  99

seq1  GGGGAGTAGATGACCCTGTGAAACTATTGATGGCACAGAGGTGTTTGGGA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGTAGATGACCCTGTGAAACTATTGATGGCACAGAGGTGTTTGGGA  149

seq1  TACACTCTCTTCCCTATGCAGGACTGCCCTTTTCCAGCCCACTTGATTCA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTCTCTTCCCTATGCAGGACTGCCCTTTTCCAGCCCACTTGATTCA  199

seq1  GCTCTGATTGAGGGAGGGAGACTAGAATTCAGGGTCAGGTACACCTAGCC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGATTGAGGGAGGGAGACTAGAATTCAGGGTCAGGTACACCTAGCC  249

seq1  TGCATCCTGCACCCTTCCTAGGGCTCTATAACCATGGGCATGTCAGTAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCCTGCACCCTTCCTAGGGCTCTATAACCATGGGCATGTCAGTAGA  299

seq1  CCCTCTGAGCTGTAGGCTTCATCCGTGTTGTCTGAGTTAAGGTTTCCATT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTGAGCTGTAGGCTTCATCCGTGTTGTCTGAGTTAAGGTTTCCATT  349

seq1  GCTCTGATGACACACCATGGCCACAAGCAACTTGGGGAGGAAAGGGTTTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGATGACACACCATGGCCACAAGCAACTTGGGGAGGAAAGGGTTTA  399

seq1  TTCACTCAGAGTTTCCACATAACAGTTCATCATCAAAAGCAGTGAGGGCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTCAGAGTTTCCACATAACAGTTCATCATCAAAAGCAGTGAGGGCA  449

seq1  GGACTCAAACAGGGCAGGAACCTGAAGGCAGGAGCTGATACAGAGACCAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCAAACAGGGCAGGAACCTGAAGGCAGGAGCTGATACAGAGACCAT  499

seq1  GAAAGGGTTGGTAATTACTGACTTGT  524
      ||||||||||||||||||||||||||
seq2  GAAAGGGTTGGTAATTACTGACTTGT  525

seq1: chr12_19959679_19960629
seq2: B6Ng01-326P18.g_70_1028

seq1  GAATTCCCATTCGGTTTGTACCGTGGTCAATTCCCTATGCAAAACACGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATTCGGTTTGTACCGTGGTCAATTCCCTATGCAAAACACGTG  50

seq1  CCTTTACCCCTGGCTTCTTAAGGCTGTGAGAAGGAGCACACACAGAACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTACCCCTGGCTTCTTAAGGCTGTGAGAAGGAGCACACACAGAACAT  100

seq1  GGGTAATATCGCTAGAGGTCATGGCTGGTGCGAGGTGGGAGTCCCGCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAATATCGCTAGAGGTCATGGCTGGTGCGAGGTGGGAGTCCCGCACT  150

seq1  GCAGCCCAGGAGAGGGCGCGCCCTCGAACCACAGCACGTAGAGAAGGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCCAGGAGAGGGCGCGCCCTCGAACCACAGCACGTAGAGAAGGGAA  200

seq1  ACACAATGCGGCGGCCCACAGGCACGAACATGCCTAGAACACACATCGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAATGCGGCGGCCCACAGGCACGAACATGCCTAGAACACACATCGCC  250

seq1  CTCTGTCCTGCGGGCTCCGCTTCCGGGCTGCTGGGTCGCGGCGAGCGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCCTGCGGGCTCCGCTTCCGGGCTGCTGGGTCGCGGCGAGCGTCC  300

seq1  CGATTGGCGGCCAGGCCTTTGCCCCGCCTCGCCTGGCCGGCCACCGCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTGGCGGCCAGGCCTTTGCCCCGCCTCGCCTGGCCGGCCACCGCCCC  350

seq1  CTCCCCAGCGCGTCCCGCCCCTCTCCGCAGAAGGCACCGGGGCAAGCGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCAGCGCGTCCCGCCCCTCTCCGCAGAAGGCACCGGGGCAAGCGGC  400

seq1  CTGTTGGCGCGCAATTCCAGCTGGCTGTTCGCGCTAGCATCAGGGCTCGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGGCGCGCAATTCCAGCTGGCTGTTCGCGCTAGCATCAGGGCTCGA  450

seq1  TCTAGAGGACGCGGCAGCCGCAGCTCCTGGAGCACAGCGGGCAGAGCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAGGACGCGGCAGCCGCAGCTCCTGGAGCACAGCGGGCAGAGCTGC  500

seq1  GGGCTGCACGCGCACCTGCAGCCACCGGGCGTCCCGCGGAGGCTCCCGCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGCACGCGCACCTGCAGCCACCGGGCGTCCCGCGGAGGCTCCCGCG  550

seq1  CCCTGCGGCGACTTCCGCGCCCGCGCTCCCCTTTGTCAAAGTCCCCAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCGGCGACTTCCGCGCCCGCGCTCCCCTTTGTCAAAGTCCCCAAGC  600

seq1  GGCGGCAGGGGCGGCGGCGGGGTCGGAGCCCGCGCCGTGGGCGACTGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGCAGGGGCGGCGGCGGGGTCGGAGCCCGCGCCGTGGGCGACTGAGG  650

seq1  CGGCCGCAGTCCGCGCCCCGGCGCCCTGGCGATGCCGGACCAGATCTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCGCAGTCCGCGCCCCGGCGCCCTGGCGATGCCGGACCAGATCTCTG  700

seq1  TGTCGGAATTCCTGGCCGAGACCCTTGAGGACTACAAGGCGCCCACGGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGGAATTCCTGGCCGAGACCCTTGAGGACTACAAGGCGCCCACGGCC  750

seq1  TCTAGCTTCACCACGCGCACGGCCCAGTGCCGGAACACCGTGGCGGCGG-  799
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TCTAGCTTCACCACGCGCACGGCCCAGTGCCGGAACACCGTGGCGGCGGT  800

seq1  TCGAGGAGGTGAGCGGTAGCTTTGCCCGCGCCGGGA-GGGAGGCTAGGGC  848
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCGAGGAGGTGAGCGGTAGCTTTGCCCGCGCCGGGAGGGGAGGCTAGGGC  850

seq1  CTCGGGGATCGCGCTGAGCCCTGGGGCCC-GGCTAGGCTTCCGC-GCCTG  896
      |||||||||| |||| ||||||||||||| |||||||||||||| |||||
seq2  CTCGGGGATCCCGCTAAGCCCTGGGGCCCGGGCTAGGCTTCCGCGGCCTG  900

seq1  GTGCCCGATATCCAGTG--CCCTCCGCCTG-CGCCCACA-CCCGGGAAAA  942
      |||||||||||||||||  || |||||||| |||||||| ||||||||||
seq2  GTGCCCGATATCCAGTGGCCCTTCCGCCTGCCGCCCACACCCCGGGAAAA  950

seq1  GTTTCTGGT  951
      |||| ||||
seq2  GTTTTTGGT  959