BAC Information

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BAC

Clone NameB6Ng01-327F03
Chromosome12 (Build37)
Map Location 39,515,205 - 39,516,253
singlet/doubletsinglet
Overlap geneEtv1
Upstream geneLOC100043139, Dgkb, LOC668824, LOC100043142
Downstream geneLOC100043145
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327F03.g
ACCGA114898
length1,098
definitionB6Ng01-327F03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatcacataaacaggaggtcgcataacttgccttgcaacctg
gaggtgtgtgaagttaaaaattagtaatagaagccaacctaaaactttct
aaatgtttgtattgcattacggtctactactctaagctctgcttgaggtg
atcgtctttggggagtgaaaatgtttctatacacaatgtaatgaaagagg
aaaaagaggaagaatggcgaaggggagaaaatatgtaccaaggaccgata
aaagacttccatgaagagtgagcatgtcgattttattggtaaaggctgaa
gcagctctatcagctcgttgcacattaataggccagttgtcattgcgtct
ccaaagccttgctttaaaaggacactgtataaactctaggctattggctt
tatctagcttcctctccaaagctgctctctaatgctttgcctgatgcgac
atagctgcactctgggaaagaaattcataaaagtatcaatcgcaaccaaa
atgtcacagaatcgatgccccatttttcaactttaatacgtgttcttaag
caccggagccctggggaagagcagttttacatacagcttgcttctgccct
acactgattttcaacgttcaaataaaatagtattcgccatttaagaaatg
gggaacatttaaaaaaaattttccaatttagctacaggcaaagaaaaacc
ctcttcttcttgcaagctagctagctgtctgttgaattttcttttaaagc
caagcgggggaggagtgggaaaattacaaatgaaacaaatgtcaagtatt
aaaggggttaatatttaattaaaaccagttctatccactgtaacaatgac
ctggagccaaacaaggcggaagatgtatgactcatactttctgccgtgaa
tgagacagctgatctcctcagcattcctcaggacagcaggcagaactgga
ttttctgccttcattcacaaaaacacagtccagcatgaccatgtggccca
accgcaatcttttcatgtcacaccctttcaagactgagccaggagcgact
tgcagggtaacacgccagtttactgctctttctcaaacagatccactg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_39515205_39516253
seq2: B6Ng01-327F03.g_123_1160 (reverse)

seq1  CAGTGGATCTGTTTGAGAAAGAGCAGTAAACTTGGCGTGTTTACCCTGCA  50
      ||||||||||||||||||||||||||||||| ||||||| ||||||||||
seq2  CAGTGGATCTGTTTGAGAAAGAGCAGTAAAC-TGGCGTG-TTACCCTGCA  48

seq1  AGTTCGGCCTCCTTGCTTCAGTTCTCTGGAAGGGTGTGACATGAAAAGAT  100
      || |||  ||||| || |||| ||| || |||||||||||||||||||||
seq2  AG-TCG--CTCCTGGC-TCAG-TCT-TGAAAGGGTGTGACATGAAAAGAT  92

seq1  TGCGGTTGGGCCACATGGTTCATGCTGGACTGTGTTTTTGTGAATGGAGG  150
      |||||||||||||||||| ||||||||||||||||||||||||||| |||
seq2  TGCGGTTGGGCCACATGG-TCATGCTGGACTGTGTTTTTGTGAATGAAGG  141

seq1  CAG-AAATCCAGTTCTGCCTGCTTGTCTTGAGGAAATGCTGAGGAGATCA  199
      ||| |||||||||||||||||| |||| ||||| ||||||||||||||||
seq2  CAGAAAATCCAGTTCTGCCTGC-TGTCCTGAGG-AATGCTGAGGAGATCA  189

seq1  GCTGTCTCATTCACGGGCAGAAAGTATGAGTCATACATCTTCCGCCTTGT  249
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GCTGTCTCATTCAC-GGCAGAAAGTATGAGTCATACATCTTCCGCCTTGT  238

seq1  TTGGCTCCAGGTCATTGTTACAGTGGATAGAACTGGTTTTAATTAAATAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTCCAGGTCATTGTTACAGTGGATAGAACTGGTTTTAATTAAATAT  288

seq1  TAACCCCTTTAATACTTGACATTTGTTTCATTTGTAATTTTCCCACTCCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCCTTTAATACTTGACATTTGTTTCATTTGTAATTTTCCCACTCCT  338

seq1  CCCCCGCTTGGCTTTAAAAGAAAATTCAACAGACAGCTAGCTAGCTTGCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCGCTTGGCTTTAAAAGAAAATTCAACAGACAGCTAGCTAGCTTGCA  388

seq1  AGAAGAAGAGGGTTTTTCTTTGCCTGTAGCTAAATTGGAAAATTTTTTTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAGAGGGTTTTTCTTTGCCTGTAGCTAAATTGGAAAATTTTTTTT  438

seq1  AAATGTTCCCCATTTCTTAAATGGCGAATACTATTTTATTTGAACGTTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTCCCCATTTCTTAAATGGCGAATACTATTTTATTTGAACGTTGA  488

seq1  AAATCAGTGTAGGGCAGAAGCAAGCTGTATGTAAAACTGCTCTTCCCCAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGTGTAGGGCAGAAGCAAGCTGTATGTAAAACTGCTCTTCCCCAG  538

seq1  GGCTCCGGTGCTTAAGAACACGTATTAAAGTTGAAAAATGGGGCATCGAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCGGTGCTTAAGAACACGTATTAAAGTTGAAAAATGGGGCATCGAT  588

seq1  TCTGTGACATTTTGGTTGCGATTGATACTTTTATGAATTTCTTTCCCAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGACATTTTGGTTGCGATTGATACTTTTATGAATTTCTTTCCCAGA  638

seq1  GTGCAGCTATGTCGCATCAGGCAAAGCATTAGAGAGCAGCTTTGGAGAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGCTATGTCGCATCAGGCAAAGCATTAGAGAGCAGCTTTGGAGAGG  688

seq1  AAGCTAGATAAAGCCAATAGCCTAGAGTTTATACAGTGTCCTTTTAAAGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAGATAAAGCCAATAGCCTAGAGTTTATACAGTGTCCTTTTAAAGC  738

seq1  AAGGCTTTGGAGACGCAATGACAACTGGCCTATTAATGTGCAACGAGCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTTGGAGACGCAATGACAACTGGCCTATTAATGTGCAACGAGCTG  788

seq1  ATAGAGCTGCTTCAGCCTTTACCAATAAAATCGACATGCTCACTCTTCAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGCTGCTTCAGCCTTTACCAATAAAATCGACATGCTCACTCTTCAT  838

seq1  GGAAGTCTTTTATCGGTCCTTGGTACATATTTTCTCCCCTTCGCCATTCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTCTTTTATCGGTCCTTGGTACATATTTTCTCCCCTTCGCCATTCT  888

seq1  TCCTCTTTTTCCTCTTTCATTACATTGTGTATAGAAACATTTTCACTCCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTTTTCCTCTTTCATTACATTGTGTATAGAAACATTTTCACTCCC  938

seq1  CAAAGACGATCACCTCAAGCAGAGCTTAGAGTAGTAGACCGTAATGCAAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACGATCACCTCAAGCAGAGCTTAGAGTAGTAGACCGTAATGCAAT  988

seq1  ACAAACATTTAGAAAGTTTTAGGTTGGCTTCTATTACTAATTTTTAACTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACATTTAGAAAGTTTTAGGTTGGCTTCTATTACTAATTTTTAACTT  1038