BAC Information

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BAC

Clone NameB6Ng01-327O06
Chromosome12 (Build37)
Map Location 59,305,425 - 59,306,605
singlet/doubletsinglet
Overlap genenone
Upstream geneAU021838, LOC100040044, Foxa1, 4921506M07Rik, EG217600, BC042761
Downstream geneSstr1, Clec14a, LOC100040183, Sec23a, Sip1, Trappc6b, Pnn, EG544872, Mia2, Mgea6, Fbxo33
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327O06.bB6Ng01-327O06.g
ACCGA115303GA115304
length1,1821,173
definitionB6Ng01-327O06.b B6Ng01-327O06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacctcctttagttagagtcacgccaagatattttatatta
tttgtgactattgagaaggtgttgtttccctaatttctttctcagcctgt
ttattctttgtatagagaagccattgacttgttgagtttatttttatatc
agctactcacgagctgtttatcagtttagggagtctctggtagaaattta
aggtcacttaatataataccattcatatccatctgcaaggtaattggact
ccttttcaatggattcccccttgattctccct
gaattccttgcctgtagagctcaagttcctttccaaggctagagtgagct
gactacacggtaggtccagaaattctgtgttcaaatcaaaaccaagtggt
aactactcaggaaaggatgatgccatgaagcttcggtatgaccatgaccc
taggatatctaccctaaggtacatggaattgcttactagagagggctgag
cctagggtggaaattgaaatcaaatggggtgcaggtgagtcaggacccag
gatacagctcttgaaatggcttctttggacttttgtcctcctaggtcata
atgaatatagagtgatatatatgctgtatataacagtttataaattcaat
tttataacttgaagggtaatcaaacaggcaaaacaaacaaaagaccttag
tcaccagtgcttacccaggccagttagggcctaggagaggaaaacacacc
agccattgtggctttcctcacaatcagcttggtgctgattccaaaccagg
acattgctcttcattcagataggaagtaagagacacacaacaatgaatgc
aaacagtgcctcccccacccccaaccccccaactaggtacacataggcct
ggaagacagttacaaagataacagtagtgttttacatcagatggctggtt
agaacatgagtattcttatttacctttcatagagagtttctatgtgttca
gatatgactatagattccattttaaataaggtgaaggtagtgaaagataa
aaaacaaaaaacaaaaacaaaaacaaaacaaaacaaaacaaaatattaaa
acaaaactccaggccataagtgtctgccctgtttaacaaaacatttgcta
atttattttcctccttaattattttgactgtcaggaaaataactctaata
aatttattcgagaaattaacatattacaatgcaaattgaataacaacaaa
atgtacccagcagaaagtggtagatggaacagaagcaaggacgaaagaat
ttcactcagttctatggccaactggcccttgaatacttgtcagtctgtag
acacacctcagagatggctgtgttatgacacatgagcatttatgaaggca
ttgtgtgcagtgatggatatagtcctggctaagtttcaatgctactgtct
atttatccctggtgtgcaagggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_59305425_59306605
seq2: B6Ng01-327O06.g_65_1237 (reverse)

seq1  CCCCCTGCACA----GGATAAATAGACAGTAGCA-TGAGACTTAAACCCA  45
      |||| ||||||    ||||||||||||||||||| ||| ||||  | |||
seq2  CCCCTTGCACACCAGGGATAAATAGACAGTAGCATTGAAACTT--AGCCA  48

seq1  GGACTATATCCCATCACTTGCAACACAATGCTTTCATAAATGCCTTCATG  95
      ||||||||| ||||||| ||| ||||||||| |||||||||||  |||||
seq2  GGACTATAT-CCATCAC-TGC-ACACAATGCCTTCATAAATGC--TCATG  93

seq1  TGGTTCATAACCACAGCCATCTTCTGAGGTGTGTCCTACAGACTGACAAG  145
      ||  |||||| |||||||||| |||||||||||| |||||||||||||||
seq2  TG--TCATAA-CACAGCCATC-TCTGAGGTGTGT-CTACAGACTGACAAG  138

seq1  TATTCAAGGGCCAGTTGGCCATAGAACTGAGTG-AATTCTTTCGTCCTTG  194
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TATTCAAGGGCCAGTTGGCCATAGAACTGAGTGAAATTCTTTCGTCCTTG  188

seq1  CTTCTGTTCCATCTACCACTTTCTGCTGGGTACATTTTGTTTGTTATTCA  244
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTTCTGTTCCATCTACCACTTTCTGCTGGGTACATTTTG-TTGTTATTCA  237

seq1  ATTTGCATTGTAATATGTTAATTTCTCGAATAAATTTATTAGAGTTATTT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCATTGTAATATGTTAATTTCTCGAATAAATTTATTAGAGTTATTT  287

seq1  TCCCTGACAGTCAAAATAATTAAGGAGGAAAATAAATTAGCAAATGTTTT  344
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-CCTGACAGTCAAAATAATTAAGGAGGAAAATAAATTAGCAAATGTTTT  336

seq1  GTTAAACAGGGCAGACACTTATGGCCTGGAGTTTTGTTTTAATATTTTGT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAACAGGGCAGACACTTATGGCCTGGAGTTTTGTTTTAATATTTTGT  386

seq1  TTTGTTTTGTTTTGTTTTTGTTTTTGTTTTTTGTTTTTTATCTTTCACTA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTGTTTTGTTTTTGTTTTTGTTTTTTGTTTTTTATCTTTCACTA  436

seq1  CCTTCACCTTATTTAAAATGGAATCTATAGTCATATCTGAACACATAGAA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACCTTATTTAAAATGGAATCTATAGTCATATCTGAACACATAGAA  486

seq1  ACTCTCTATGAAAGGTAAATAAGAATACTCATGTTCTAACCAGCCATCTG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTATGAAAGGTAAATAAGAATACTCATGTTCTAACCAGCCATCTG  536

seq1  ATGTAAAACACTACTGTTATCTTTGTAACTGTCTTCCAGGCCTATGTGTA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAAACACTACTGTTATCTTTGTAACTGTCTTCCAGGCCTATGTGTA  586

seq1  CCTAGTTGGGGGGTTGGGGGTGGGGGAGGCACTGTTTGCATTCATTGTTG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTTGGGGGGTTGGGGGTGGGGGAGGCACTGTTTGCATTCATTGTTG  636

seq1  TGTGTCTCTTACTTCCTATCTGAATGAAGAGCAATGTCCTGGTTTGGAAT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTCTTACTTCCTATCTGAATGAAGAGCAATGTCCTGGTTTGGAAT  686

seq1  CAGCACCAAGCTGATTGTGAGGAAAGCCACAATGGCTGGTGTGTTTTCCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACCAAGCTGATTGTGAGGAAAGCCACAATGGCTGGTGTGTTTTCCT  736

seq1  CTCCTAGGCCCTAACTGGCCTGGGTAAGCACTGGTGACTAAGGTCTTTTG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAGGCCCTAACTGGCCTGGGTAAGCACTGGTGACTAAGGTCTTTTG  786

seq1  TTTGTTTTGCCTGTTTGATTACCCTTCAAGTTATAAAATTGAATTTATAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTGCCTGTTTGATTACCCTTCAAGTTATAAAATTGAATTTATAA  836

seq1  ACTGTTATATACAGCATATATATCACTCTATATTCATTATGACCTAGGAG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTATATACAGCATATATATCACTCTATATTCATTATGACCTAGGAG  886

seq1  GACAAAAGTCCAAAGAAGCCATTTCAAGAGCTGTATCCTGGGTCCTGACT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAAGTCCAAAGAAGCCATTTCAAGAGCTGTATCCTGGGTCCTGACT  936

seq1  CACCTGCACCCCATTTGATTTCAATTTCCACCCTAGGCTCAGCCCTCTCT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGCACCCCATTTGATTTCAATTTCCACCCTAGGCTCAGCCCTCTCT  986

seq1  AGTAAGCAATTCCATGTACCTTAGGGTAGATATCCTAGGGTCATGGTCAT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGCAATTCCATGTACCTTAGGGTAGATATCCTAGGGTCATGGTCAT  1036

seq1  ACCGAAGCTTCATGGCATCATCCTTTCCTGAGTAGTTACCACTTGGTTTT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGAAGCTTCATGGCATCATCCTTTCCTGAGTAGTTACCACTTGGTTTT  1086

seq1  GATTTGAACACAGAATTTCTGGACCTACCGTGTAGTCAGCTCACTCTAGC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGAACACAGAATTTCTGGACCTACCGTGTAGTCAGCTCACTCTAGC  1136

seq1  CTTGGAAAGGAACTTGAGCTCTACAGGCAAGGAATTC  1181
      |||||||||||||||||||||||||||||||||||||
seq2  CTTGGAAAGGAACTTGAGCTCTACAGGCAAGGAATTC  1173