BAC Information

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BAC

Clone NameB6Ng01-328G13
Chromosome12 (Build37)
Map Location 49,064,665 - 49,204,812
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039190, EG664891
Downstream geneGm1818, GA_x5J8B7W54VK-284379-285078, Olfr1399-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328G13.bB6Ng01-328G13.g
ACCGA115682GA115683
length1,0011,063
definitionB6Ng01-328G13.b B6Ng01-328G13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(49,204,276 - 49,204,812)(49,064,665 - 49,065,741)
sequence
gaattcatctctaccaaggccatatcacttatcttttattcaaataatag
acaatttaacttgacctgaaaacagaaacctttgattcacatacagaaat
aatttaatcgtagactggttaaaattcaaaatcttcaccaagcattacct
attttaacacatatatatttacttaattattattaattgttgtggtaaat
ctacaactcaaatatgccccagcaatgaagacacaactcaatttatatga
atatatgctgtgtgcctagattaggcagatctaccactacactaccatct
tccacatctatgagagcccctttatagcttgtggtttctcctgatcatgt
gcttctgcttcactcttcttttccttctcctcccctgcatactgtccctc
ttccattttttttccttcttctctccctccaccttcccctcctcttatct
gcccaatcataagctctcctttattttacaaattaaggtgggaagcaggt
ttccaggaaattacatgagtgctgactcattccttgttcacagcccccac
agaaaaaacaaaattaacatcaaatacatttagccccagggctatctgca
gttaatttgttggcttagggatattcaaagattatcatggtagaacagaa
tacagtttgatttttgtggtccttgctttgcttcttgctaagtctttcaa
gtgctcatatttcttcaaatagattggaaagcagttgttgaggtctcact
gaactagatatcttctaagatagtttgtatttgttagggaagatagattg
taaatgtgaagacttttcttacatgtacatgttggagtcacctttgtcta
tgtattttgaattcaaaagctttctgtcaagatctcattgtcattaaatg
ggacctcattaaactggaaagcttctataagcaaagacatgtctaatagg
acaaatcagtaacctacagcatgggaaacagtcttcactaaccccacaca
t

gaattctatgtggtgattatggaataaagcttagaattgacagaaaacaa
acaaaaaacaaaagcaacaacagtaaaataaaaataataatacagtataa
aataattaaataaaaatatcccaattataactataagaacaatgtttatt
gagattcttgggttgatttttgttaaaattttatgtttaatttgacaatg
ctttgctgtgcatttgcttctttgtcatatctcctagatatactcattca
aaattaaaagtatgcttatgttattgactttatatactgtattatgatta
tcttgtgttttctacaaagtttactagggcacatccaaagtctcatagtt
taatagtatgtacacaagtaatactaatttattgtagtgtatgtattttc
tactcagatttattttattaagaatgtatagagggccaggaaatagaatg
aaaatatatagcaggatggatgagaaactggggatagccactggagtgtt
ccagatgcctgggaaacaagagactccctgaacacaacagggacgatttt
agcaaagaagaggcagaatctgtagagagcacctccattagatagggaca
gccctcatctcaaagtttttgttttgttttgttttctttttccttttttt
tttttttttttacactctagattttattcccctcctggtccagcctctga
ctgttccacatcccatacctcctccctgcctgttgaagagtttaagagac
ttttattttgacattttttgtgttcctggttctatgggatctctgtgtat
cacctaaaatgttaataaatgtagttttcactctcatttatttccagaca
tcaaagactttctttccttcctgaatatgatagttagtgtctttcagata
agacctctcacattatacctcaaactacataagacaccccagattgagct
aaataagtcatattatcattgttccatctcatagtggcagtttgggctct
cttagatagaggtggagatcagatagacgtagaattggttgtgtttagat
aaaaatctcaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_49204276_49204812
seq2: B6Ng01-328G13.b_45_581 (reverse)

seq1  ACAAGGAATGAGTCAGCACTCATGTAATTTCCTGGAAACCTGCTTCCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAATGAGTCAGCACTCATGTAATTTCCTGGAAACCTGCTTCCCAC  50

seq1  CTTAATTTGTAAAATAAAGGAGAGCTTATGATTGGGCAGATAAGAGGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATTTGTAAAATAAAGGAGAGCTTATGATTGGGCAGATAAGAGGAGG  100

seq1  GGAAGGTGGAGGGAGAGAAGAAGGAAAAAAAATGGAAGAGGGACAGTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGTGGAGGGAGAGAAGAAGGAAAAAAAATGGAAGAGGGACAGTATG  150

seq1  CAGGGGAGGAGAAGGAAAAGAAGAGTGAAGCAGAAGCACATGATCAGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGAGGAGAAGGAAAAGAAGAGTGAAGCAGAAGCACATGATCAGGAG  200

seq1  AAACCACAAGCTATAAAGGGGCTCTCATAGATGTGGAAGATGGTAGTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCACAAGCTATAAAGGGGCTCTCATAGATGTGGAAGATGGTAGTGTA  250

seq1  GTGGTAGATCTGCCTAATCTAGGCACACAGCATATATTCATATAAATTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTAGATCTGCCTAATCTAGGCACACAGCATATATTCATATAAATTGA  300

seq1  GTTGTGTCTTCATTGCTGGGGCATATTTGAGTTGTAGATTTACCACAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTCTTCATTGCTGGGGCATATTTGAGTTGTAGATTTACCACAACA  350

seq1  ATTAATAATAATTAAGTAAATATATATGTGTTAAAATAGGTAATGCTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATAATAATTAAGTAAATATATATGTGTTAAAATAGGTAATGCTTGG  400

seq1  TGAAGATTTTGAATTTTAACCAGTCTACGATTAAATTATTTCTGTATGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATTTTGAATTTTAACCAGTCTACGATTAAATTATTTCTGTATGTG  450

seq1  AATCAAAGGTTTCTGTTTTCAGGTCAAGTTAAATTGTCTATTATTTGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAAGGTTTCTGTTTTCAGGTCAAGTTAAATTGTCTATTATTTGAAT  500

seq1  AAAAGATAAGTGATATGGCCTTGGTAGAGATGAATTC  537
      |||||||||||||||||||||||||||||||||||||
seq2  AAAAGATAAGTGATATGGCCTTGGTAGAGATGAATTC  537


seq1: chr12_49064665_49065741
seq2: B6Ng01-328G13.g_69_1131

seq1  GAATTCTATGTGGTGATTATGGAATAAAGCTTAGAATTGACAGAAAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGTGGTGATTATGGAATAAAGCTTAGAATTGACAGAAAACAA  50

seq1  ACAAAAAACAAAAGCAACAACAGTAAAATAAAAATAATAATACAGTATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAACAAAAGCAACAACAGTAAAATAAAAATAATAATACAGTATAA  100

seq1  AATAATTAAATAAAAATATCCCAATTATAACTATAAGAACAATGTTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTAAATAAAAATATCCCAATTATAACTATAAGAACAATGTTTATT  150

seq1  GAGATTCTTGGGTTGATTTTTGTTAAAATTTTATGTTTAATTTGACAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTCTTGGGTTGATTTTTGTTAAAATTTTATGTTTAATTTGACAATG  200

seq1  CTTTGCTGTGCATTTGCTTCTTTGTCATATCTCCTAGATATACTCATTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTGTGCATTTGCTTCTTTGTCATATCTCCTAGATATACTCATTCA  250

seq1  AAATTAAAAGTATGCTTATGTTATTGACTTTATATACTGTATTATGATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAAAGTATGCTTATGTTATTGACTTTATATACTGTATTATGATTA  300

seq1  TCTTGTGTTTTCTACAAAGTTTACTAGGGCACATCCAAAGTCTCATAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGTTTTCTACAAAGTTTACTAGGGCACATCCAAAGTCTCATAGTT  350

seq1  TAATAGTATGTACACAAGTAATACTAATTTATTGTAGTGTATGTATTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGTATGTACACAAGTAATACTAATTTATTGTAGTGTATGTATTTTC  400

seq1  TACTCAGATTTATTTTATTAAGAATGTATAGAGGGCCAGGAAATAGAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGATTTATTTTATTAAGAATGTATAGAGGGCCAGGAAATAGAATG  450

seq1  AAAATATATAGCAGGATGGATGAGAAACTGGGGATAGCCACTGGAGTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATATAGCAGGATGGATGAGAAACTGGGGATAGCCACTGGAGTGTT  500

seq1  CCAGATGCCTGGGAAACAAGAGACTCCCTGAACACAACAGGGACGATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGCCTGGGAAACAAGAGACTCCCTGAACACAACAGGGACGATTTT  550

seq1  AGCAAAGAAGAGGCAGAATCTGTAGAGAGCACCTCCATTAGATAGGGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGAAGAGGCAGAATCTGTAGAGAGCACCTCCATTAGATAGGGACA  600

seq1  GCCCTCATCTCAAAGTTTTTGTTTTGTTTTGTTTTCTTTTTCCTTTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCATCTCAAAGTTTTTGTTTTGTTTTGTTTTCTTTTTCCTTTTTTT  650

seq1  TTTTTTTTTTTACACTCTAGATTTTATTCCCCTCCTGGTCCAGCCTCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTACACTCTAGATTTTATTCCCCTCCTGGTCCAGCCTCTGA  700

seq1  CTGTTCCACATCCCATACCTCCTCCCTGCCTGTTGAAGAGTTTAAGAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCACATCCCATACCTCCTCCCTGCCTGTTGAAGAGTTTAAGAGAC  750

seq1  TTTTATTTTGACATTTTTTGTGTTCCTGGTTCTATGGGATCTCTGTGTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTGACATTTTTTGTGTTCCTGGTTCTATGGGATCTCTGTGTAT  800

seq1  CACCTAAAATGTTAATAAATGTAGTTTTCACTCTCATTTATTTCCAGACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAAAATGTTAATAAATGTAGTTTTCACTCTCATTTATTTCCAGACA  850

seq1  TCAAAGACTTTCTTTCCTTCCTGAATATGATAGTTAGTGTCTTTCAGATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGACTTTCTTTCCTTCCTGAATATGATAGTTAGTGTCTTTCAGATA  900

seq1  AGACCTCTCACATTATACCTCAAAACTACATAAAGACACCCCAGATTGAG  950
      ||||||||||||||||||||| ||||||||| ||||||||||||||||||
seq2  AGACCTCTCACATTATACCTC-AAACTACAT-AAGACACCCCAGATTGAG  948

seq1  CTAAATAAGTCATATTAATCATTGTTCCATCTCATAGTGGCAGTTTGGGC  1000
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTAAATAAGTCATATT-ATCATTGTTCCATCTCATAGTGGCAGTTTGGGC  997

seq1  TCTCTTTAGATAGAGGTGGAAGGATCAGAATAGAAGGTAGAAATTGGTTT  1050
      |||| |||||||||||||||  |||||| |||| | |||| |||||| ||
seq2  TCTC-TTAGATAGAGGTGGA--GATCAG-ATAG-ACGTAG-AATTGG-TT  1040

seq1  GTGTTTAGGATAAAAAAATTCTCAAAA  1077
      ||||||| ||||||||   ||||||||
seq2  GTGTTTA-GATAAAAA---TCTCAAAA  1063


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