BAC Information

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BAC

Clone NameB6Ng01-328I03
Chromosome12 (Build37)
Map Location 9,550,145 - 9,551,271
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc7a15, LOC100043154, Pum2, F730043H23, Sdc1, Laptm4a, Matn3, Wdr35, Ttc32, LOC633030, LOC100042238
Downstream geneOsr1, LOC382567, Nt5c1b, Rdh14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328I03.bB6Ng01-328I03.g
ACCGA115753GA115754
length1,1351,144
definitionB6Ng01-328I03.b B6Ng01-328I03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttaaagatagccagaataataccattccaacactcttattttg
gggtgaagtgacaatagggttatgaatggagtttgccttcctctctctta
ggcctgaggatatcttggcactcatgtgattcattttcatgttgtgattt
tcaccctgtgcttgaagtatcattgtcattgttccccaccttgtacataa
agattcctaatattatgggcaggaattttcataatactgtatcttgacgg
ttagtaattagccattatgtgcattaatgaaatatttctctaatatatat
tcaccaaattacagcaacaattatgcaagacaagactggttggtagacag
tgataaaaagtgagacatgcatttcaaaaaatccgcatggtatcatttgg
tgctgccaaaagcttgacatttgaaaaataaaaataaaaaataaatacag
cttacttatcctggagatttttgcttgaagagaaatgcgaaggagaaata
agcatatcacaaacatcttgagttaattatcagagaaaatgtagaagact
tgggtaaatttaattttagataaacaaaagatagtcatttggataaataa
attccacaacgaggtaacatagtaaaatttatttttttatctgtaaaaca
attaaattgaactaaatgttctttaaattttgtatctttggctgcaatta
gcatagtatgaacttatataaatcagctaaagtgtgcatttcaatgattt
ttatttagtccatgctcagtcatgtatcagccctgtctacatttagaaca
ttttcttttactctaaaggacgttgtttagtagttgttagcagttatggt
gcctttcccttttttgactcaaaggagctaaccccatactgggggtgctt
atcatagcagctgagaccttagaacatccagacacactggctgcagtaag
tacaaagttgtgttataaagggaaaagccaccaaacaaaaagcccacctg
gactgttctgaggtccctgctacaatgtggttgcagaagacttcctcgtc
tggcctcagtgggcggcaacgtgtttggtcctgtgggaagccttgatgtc
ccaaagaagaagaattgtttagaaagggtgaggta
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgttggcgaggatgtggagaaaggggaacacttctccattgttggtg
ggattgcaaacttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaagaacacatgctccactat
gttcatagcagccttgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctattaaaaaaatgaatttatgaaattcaaatggatg
gacctggagggtatcatcctgagtgaagtaacccaatcacaaaggaactt
gcacaatatgtactcactgataagtggataatagcccagaaacttaggat
acccaagatataagatacaacttgccaaacgcatgaaattcaagaagaat
gaagaccaaagtgtggacactttaccctttcttagaaatgggaacaaaac
acccatagaaggagttacagagacaaaatttggagctgtgacgaaaggat
ggaccatctagtgactgccatatgcagggatccatcccataatcagcttc
caaatgctgacaccattgcatacactagcaagatttcactgaaagaaccc
agttatagctctctcttgtgagactatgcccggggcctagcaaacacata
agtggatgatcacagtcagctattgggatgggtcacacggcccctaatgg
aggagctagagaaattacccaaggagctatatgaactaccagtacctggg
gagctcttgttctttagctgcatatgtatcaaagatggcctagtcggcca
tcactgcaaagagaggccattggacttgcaaactttatatgcccagtaca
ggggaacgcccagggccaaaaaagggggagtttggtgtggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_9550145_9551271
seq2: B6Ng01-328I03.b_44_1178 (reverse)

seq1  TACCTCACCC-TTCTAA--CATTCCTCTTCTCTGGGACATCAAGCCT--C  45
      |||||||||| ||||||   |||| |||||| |||||||||||| ||  |
seq2  TACCTCACCCTTTCTAAACAATTCTTCTTCTTTGGGACATCAAGGCTTCC  50

seq1  CACAGGACCAAACACGTTGCCGCCCACTGAGGCCAGACGAGGAAGTCTTC  95
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGACCAAACACGTTGCCGCCCACTGAGGCCAGACGAGGAAGTCTTC  100

seq1  TGCAA-CACA-TGTAGCAGGGACCTCAGAACAGTCCAGGTGGGCTTTTTG  143
      ||||| |||| |||||||||||||||||||||||||||||||||||||||
seq2  TGCAACCACATTGTAGCAGGGACCTCAGAACAGTCCAGGTGGGCTTTTTG  150

seq1  TTTGGTGGCTTTT-CCTTTATAACACAACTTTGTACTTACTGCAGCCAGT  192
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGGCTTTTCCCTTTATAACACAACTTTGTACTTACTGCAGCCAGT  200

seq1  GTGTCTGGATGTTCTAAGGTCTCAGCTGCTATGATAAGCACCCCCAGTAT  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGGATGTTCTAAGGTCTCAGCTGCTATGATAAGCACCCCCAGTAT  250

seq1  GGGGTTAGCTCCTTTGAGTCAAAAAAGGGAAAGGCACCATAACTGCTAAC  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTAGCTCCTTTGAGTCAAAAAAGGGAAAGGCACCATAACTGCTAAC  300

seq1  AACTACTAAACAACGTCCTTTAGAGTAAAAGAAAATGTTCTAAATGTAGA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACTAAACAACGTCCTTTAGAGTAAAAGAAAATGTTCTAAATGTAGA  350

seq1  CAGGGCTGATACATGACTGAGCATGGACTAAATAAAAATCATTGAAATGC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTGATACATGACTGAGCATGGACTAAATAAAAATCATTGAAATGC  400

seq1  ACACTTTAGCTGATTTATATAAGTTCATACTATGCTAATTGCAGCCAAAG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTAGCTGATTTATATAAGTTCATACTATGCTAATTGCAGCCAAAG  450

seq1  ATACAAAATTTAAAGAACATTTAGTTCAATTTAATTGTTTTACAGATAAA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAAATTTAAAGAACATTTAGTTCAATTTAATTGTTTTACAGATAAA  500

seq1  AAAATAAATTTTACTATGTTACCTCGTTGTGGAATTTATTTATCCAAATG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAATTTTACTATGTTACCTCGTTGTGGAATTTATTTATCCAAATG  550

seq1  ACTATCTTTTGTTTATCTAAAATTAAATTTACCCAAGTCTTCTACATTTT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCTTTTGTTTATCTAAAATTAAATTTACCCAAGTCTTCTACATTTT  600

seq1  CTCTGATAATTAACTCAAGATGTTTGTGATATGCTTATTTCTCCTTCGCA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATAATTAACTCAAGATGTTTGTGATATGCTTATTTCTCCTTCGCA  650

seq1  TTTCTCTTCAAGCAAAAATCTCCAGGATAAGTAAGCTGTATTTATTTTTT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTTCAAGCAAAAATCTCCAGGATAAGTAAGCTGTATTTATTTTTT  700

seq1  ATTTTTATTTTTCAAATGTCAAGCTTTTGGCAGCACCAAATGATACCATG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATTTTTCAAATGTCAAGCTTTTGGCAGCACCAAATGATACCATG  750

seq1  CGGATTTTTTGAAATGCATGTCTCACTTTTTATCACTGTCTACCAACCAG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGATTTTTTGAAATGCATGTCTCACTTTTTATCACTGTCTACCAACCAG  800

seq1  TCTTGTCTTGCATAATTGTTGCTGTAATTTGGTGAATATATATTAGAGAA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTCTTGCATAATTGTTGCTGTAATTTGGTGAATATATATTAGAGAA  850

seq1  ATATTTCATTAATGCACATAATGGCTAATTACTAACCGTCAAGATACAGT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCATTAATGCACATAATGGCTAATTACTAACCGTCAAGATACAGT  900

seq1  ATTATGAAAATTCCTGCCCATAATATTAGGAATCTTTATGTACAAGGTGG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGAAAATTCCTGCCCATAATATTAGGAATCTTTATGTACAAGGTGG  950

seq1  GGAACAATGACAATGATACTTCAAGCACAGGGTGAAAATCACAACATGAA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAATGACAATGATACTTCAAGCACAGGGTGAAAATCACAACATGAA  1000

seq1  AATGAATCACATGAGTGCCAAGATATCCTCAGGCCTAAGAGAGAGGAAGG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATCACATGAGTGCCAAGATATCCTCAGGCCTAAGAGAGAGGAAGG  1050

seq1  CAAACTCCATTCATAACCCTATTGTCACTTCACCCCAAAATAAGAGTGTT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCCATTCATAACCCTATTGTCACTTCACCCCAAAATAAGAGTGTT  1100

seq1  GGAATGGTATTATTCTGGCTATCTTTAAAGAATTC  1127
      |||||||||||||||||||||||||||||||||||
seq2  GGAATGGTATTATTCTGGCTATCTTTAAAGAATTC  1135