BAC Information

Click to search

BAC

Clone NameB6Ng01-329P09
Chromosome12 (Build37)
Map Location 78,367,701 - 78,368,837
singlet/doubletsinglet
Overlap geneFut8
Upstream geneMthfd1, Akap5, Zbtb25, Zbtb1, Hspa2, Gm70, LOC100041694, Plekhg3, Spnb1, Churc1, Gpx2, Rab15, Fntb, Max, LOC100041765, LOC100041772
Downstream geneLOC230765, LOC666659, EG626215, Gphn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329P09.bB6Ng01-329P09.g
ACCGA116774GA116775
length1,1371,141
definitionB6Ng01-329P09.b B6Ng01-329P09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcaacatgacagtacagtactcatctttgatagcattgtatg
acaagttgctccaggattatgttgtacattttctgttgattctgtgaaaa
cagcaattcctccaaaaattcttagccatggagactattctatagtggga
cactatttgaacaatatcctcaccagaaccatcagtgaaaagaaccttgg
tttggcttaaatatcactcagttataagtttctgtttcaagccactgttc
agtgatctgcacttttgttgtccaaatatgtgtccctatatgctgtgcct
tagtcctggaaactttttaaaatttaaaaatatttgttgagtacatatta
gactgtgaatatcttttcaagcccatgatttgttctccctaggtggtttc
taggtgctcactatgtagtgaaatgaataagatcctggctttgatagcgt
accttattcttctttatatgcgttgtgtaactttgagtataaagaattta
ataggagctggagataattataaagtaattataaatataaataattatat
tttgtcaaatattataaacatacatgggtaaatatatatcatagtaattg
gtgggtgagaacaccttatcaacatggtatataacagtacttaactagtt
tgacaatatagatgtcgtgctccaaataagtgtagcattcatagctccat
gtgttaataatttaaacaataaagtttaccaaattgactattaagcttcg
tatttcgtattttttattttgtgttcccaagttgtaaatagacaaagtta
aagatatgttttctccagcacattaaattaacttgtactgtagttttggc
ttgtaaacaacatagaattaactactattgtcagtgtggaaacccttttc
ctgctttattcacattacttaggaggtgagtggtatgctgtggaggaatg
tcactttcctgtaggagccattgattttttcttgttgttcctaaatctga
ttctgctgcagaatactgcctttctgcaggggcaccatgctgctaacagt
gtgacctgctctcatgcgaatgagaacagaaaaacttattgacatagcct
gcaattctaatataaaacaccattaattcacaacaca
gaattcagaatgatcaaacaactagatgactaaacataagaaaagtgctc
aagagaggacaggtgtccgcctggcttgggaggcggcctcagcagcagcg
gtcgccatcttggttccgggactcagcagaacttaggaaattagtctgaa
caggttagagggtgcgccagagaaccggacagcttctgggaaaggcggaa
gcacagagccgctgaggcagcacccttggcgggccgcagacagccggcca
ctgtccggaccagaggacaggtgtccgcctggcttgggaggcggcctcag
cctcagcagcagcggtcgccatcttggttccaggactccctggagcttag
gaatttagcctgcacaggtgagagtctgcaccacagaagctgacagattc
tgggaactgccaaaacaacacagcttctgagaaaggccctgttttgggcc
ttcttcttcgaccaggaggaggtccaaaaacaagatatctgcgcaccttc
cctgtaagagagcttgccagcagagagtgctctgagcactgaaactcaga
ggagagaatctgtctcccaggtctgctgagagacggtaacagaatcacca
gaagaacaatctctaaacagagtcaactataactactaactccagagatt
accagatggcgaaaggtaaacgtaggaatcctactaacaggaaccaagac
cactcaccatcatcagaacccagcactcccacttcgtccagtccagggca
ccccaacacactcgaaaacctagacctagatttaaaagcatatctcatga
tgatggtagaggacatcaagaaggactttaataaatcacttaaagaaata
caggagaacactgctaaagagttacaagtcctttaagaaaaacaggaaaa
cacaatcaaacaggtagaagtccttacagaaaaagaggaaaaaacataca
acaggtgatgggaaatgaacaaaaccatactagacctaaaaaggaagtag
acacataaagaaaactcaagtgagcaacactgagaatagaaacctagaag
gaatctgcatcatagatttgagcatcagcaaccggatacagaatggagag
gatctcagtgcagaagaattctatggagaaactcggcctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_78367701_78368837
seq2: B6Ng01-329P09.b_45_1181

seq1  GAATTCTTTCAACATGACAGTACAGTACTCATCTTTGATAGCATTGTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAACATGACAGTACAGTACTCATCTTTGATAGCATTGTATG  50

seq1  ACAAGTTGCTCCAGGATTATGTTGTACATTTTCTGTTGATTCTGTGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTTGCTCCAGGATTATGTTGTACATTTTCTGTTGATTCTGTGAAAA  100

seq1  CAGCAATTCCTCCAAAAATTCTTAGCCATGGAGACTATTCTATAGTGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAATTCCTCCAAAAATTCTTAGCCATGGAGACTATTCTATAGTGGGA  150

seq1  CACTATTTGAACAATATCCTCACCAGAACCATCAGTGAAAAGAACCTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATTTGAACAATATCCTCACCAGAACCATCAGTGAAAAGAACCTTGG  200

seq1  TTTGGCTTAAATATCACTCAGTTATAAGTTTCTGTTTCAAGCCACTGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTTAAATATCACTCAGTTATAAGTTTCTGTTTCAAGCCACTGTTC  250

seq1  AGTGATCTGCACTTTTGTTGTCCAAATATGTGTCCCTATATGCTGTGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATCTGCACTTTTGTTGTCCAAATATGTGTCCCTATATGCTGTGCCT  300

seq1  TAGTCCTGGAAACTTTTTAAAATTTAAAAATATTTGTTGAGTACATATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCTGGAAACTTTTTAAAATTTAAAAATATTTGTTGAGTACATATTA  350

seq1  GACTGTGAATATCTTTTCAAGCCCATGATTTGTTCTCCCTAGGTGGTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTGAATATCTTTTCAAGCCCATGATTTGTTCTCCCTAGGTGGTTTC  400

seq1  TAGGTGCTCACTATGTAGTGAAATGAATAAGATCCTGGCTTTGATAGCGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGCTCACTATGTAGTGAAATGAATAAGATCCTGGCTTTGATAGCGT  450

seq1  ACCTTATTCTTCTTTATATGCGTTGTGTAACTTTGAGTATAAAGAATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTATTCTTCTTTATATGCGTTGTGTAACTTTGAGTATAAAGAATTTA  500

seq1  ATAGGAGCTGGAGATAATTATAAAGTAATTATAAATATAAATAATTATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAGCTGGAGATAATTATAAAGTAATTATAAATATAAATAATTATAT  550

seq1  TTTGTCAAATATTATAAACATACATGGGTAAATATATATCATAGTAATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCAAATATTATAAACATACATGGGTAAATATATATCATAGTAATTG  600

seq1  GTGGGTGAGAACACCTTATCAACATGGTATATAACAGTACTTAACTAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGAGAACACCTTATCAACATGGTATATAACAGTACTTAACTAGTT  650

seq1  TGACAATATAGATGTCGTGCTCCAAATAAGTGTAGCATTCATAGCTCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATATAGATGTCGTGCTCCAAATAAGTGTAGCATTCATAGCTCCAT  700

seq1  GTGTTAATAATTTAAACAATAAAGTTTACCAAATTGACTATTAAGCTTCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTAATAATTTAAACAATAAAGTTTACCAAATTGACTATTAAGCTTCG  750

seq1  TATTTCGTATTTTTTATTTTGTGTTCCCAAGTTGTAAATAGACAAAGTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCGTATTTTTTATTTTGTGTTCCCAAGTTGTAAATAGACAAAGTTA  800

seq1  AAGATATGTTTTCTCCAGCACATTAAATTAACTTGTACTGTAGTTTTGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATGTTTTCTCCAGCACATTAAATTAACTTGTACTGTAGTTTTGGC  850

seq1  TTGTAAACAACATAGAATTAACTACTATTGTCAGTGTGGAAACCCTTTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAACAACATAGAATTAACTACTATTGTCAGTGTGGAAACCCTTTTC  900

seq1  CTGCTTTATTCACATTACTTAGGAGGTGAGTGGTATGCTGTGGAGGAATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTATTCACATTACTTAGGAGGTGAGTGGTATGCTGTGGAGGAATG  950

seq1  TCACTTTCCTGTAGGAGCCATTGA-TTTTTCTTGTTGTTCCTAAATCTGA  999
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCACTTTCCTGTAGGAGCCATTGATTTTTTCTTGTTGTTCCTAAATCTGA  1000

seq1  TTCTGCTGCAGAATAACTGCCTTTCTGCAGGGGCACCATGCTGCTAACAG  1049
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTCTGCTGCAGAAT-ACTGCCTTTCTGCAGGGGCACCATGCTGCTAACAG  1049

seq1  TGTGACCCTGCTCTCATGCGGAATGAG-ACAG-AAAACTTATGACCATAG  1097
      ||||| ||||||||||||| ||||||| |||| |||||||||   |||||
seq2  TGTGA-CCTGCTCTCATGC-GAATGAGAACAGAAAAACTTATTGACATAG  1097

seq1  CCTGGAATTCATAATATAAAACA-CATAAATTCACAACACA  1137
      |||| ||||| |||||||||||| ||| |||||||||||||
seq2  CCTGCAATTC-TAATATAAAACACCATTAATTCACAACACA  1137