BAC Information

Click to search

BAC

Clone NameB6Ng01-330J16
Chromosome12 (Build37)
Map Location 49,706,326 - 49,706,862
singlet/doubletsinglet
Overlap genenone
Upstream geneEG664891, Gm1818
Downstream geneGA_x5J8B7W54VK-284379-285078, Olfr1399-ps1, EG665036, LOC100039366, Foxg1, ENSMUSG00000045946, LOC100039424
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330J16.bB6Ng01-330J16.g
ACCGA117219GA117220
length1,158568
definitionB6Ng01-330J16.b B6Ng01-330J16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatacagaatggctgagaagcacctgaaaaaaat
gttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacag
cagatgctgccgaggatgtggagtaagaggaacactcctccattggtggg
attgcaagcttgtacaactactctggaaatcagtctggcggtttctcaga
aaattggacatattactaccagtggttcccacaatacctctcctgggcat
atatccagaagatgttccaactggtaagaaggacacatgctccagaatgt
tcatagcagccttatttacaatagccagaagctggaaagaacccagatgc
ccctcaacagaggaatggatacagaaaatgtgttacatttacacaatgga
gtactactcagctattaaaaagaacgaatttatgaaattcctaggcaaat
ggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaaag
aactcacacaatatatactcactggtaagtggatattagtccagaaattt
agaatacccaagatataagatacaatttcccaaacacatgaaactgaaaa
agaacgaaaaccaaagtgtggacactttcccccttcttagaatcgggaac
aaaacacccatggaaggagttgcagagacacagtttggagctgagacgaa
aggatggaccatctagagaatgccatatctggggaatcagcttccaaacg
ctgacaccattgcatacactagcaagattttgctgaaaggacccagatat
agctatttcttgtgagactatgctgggtcctagcaaacacagaagtggat
gctcacagttagctattggatggatcacagggccccaatggaggagctag
agaaagtaaccaaggagctaaagggatctgcaccctatagtgacacatat
gactacccagtactctccagagctcgtgtctctagctgcatatatatcag
aagatggctagtcgcattcattgaaaggaagtccaatcagagttgcaaac
tttatctgcctcagttacggtgaatggccaggatagaagtgggagtgggt
gggtgggt
agacacacacacatctttaattcctctggttggaatacaaacaagtccct
agtacacaactttaaagtaaaattaatttttagaaggaagcaaccatgtt
tgaaaatgacatctatatttagtcagacaaaatgatgaatcagagaaatg
cttgacagaatgagtcagggagaagatatgtccaactcttaggagaacaa
cacaggaaagcaaagctctttgggagtagttaggggaaagagaggcagtg
atctgggagtcagtgcagtgagtgtaatgtagtgaggttgaggaggttga
attcagagataaagaatgaaccacaaaattagaagagattctcagattta
gttttagactaagcaaagcaattaaggttaagtcagattgaatcattcag
ctttgagaggagtttgagcaagaacagctgaggtgaaccagctctccatt
gttcataaagagctagaaagggtaagtttattcagaagtaaatatgctga
gatgacaattatgtctagcaagtgaaaactatattacccatccttaaaga
agtgtaaggataacatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_49706326_49706862
seq2: B6Ng01-330J16.g_104_640

seq1  GGAATACAAACAAGTCCCTAGTACACAACTTTAAAGTAAAATTAATTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATACAAACAAGTCCCTAGTACACAACTTTAAAGTAAAATTAATTTTT  50

seq1  AGAAGGAAGCAACCATGTTTGAAAATGACATCTATATTTAGTCAGACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAAGCAACCATGTTTGAAAATGACATCTATATTTAGTCAGACAAA  100

seq1  ATGATGAATCAGAGAAATGCTTGACAGAATGAGTCAGGGAGAAGATATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGAATCAGAGAAATGCTTGACAGAATGAGTCAGGGAGAAGATATGT  150

seq1  CCAACTCTTAGGAGAACAACACAGGAAAGCAAAGCTCTTTGGGAGTAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTCTTAGGAGAACAACACAGGAAAGCAAAGCTCTTTGGGAGTAGTT  200

seq1  AGGGGAAAGAGAGGCAGTGATCTGGGAGTCAGTGCAGTGAGTGTAATGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAAGAGAGGCAGTGATCTGGGAGTCAGTGCAGTGAGTGTAATGTA  250

seq1  GTGAGGTTGAGGAGGTTGAATTCAGAGATAAAGAATGAACCACAAAATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGTTGAGGAGGTTGAATTCAGAGATAAAGAATGAACCACAAAATTA  300

seq1  GAAGAGATTCTCAGATTTAGTTTTAGACTAAGCAAAGCAATTAAGGTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGATTCTCAGATTTAGTTTTAGACTAAGCAAAGCAATTAAGGTTAA  350

seq1  GTCAGATTGAATCATTCAGCTTTGAGAGGAGTTTGAGCAAGAACAGCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGATTGAATCATTCAGCTTTGAGAGGAGTTTGAGCAAGAACAGCTGA  400

seq1  GGTGAACCAGCTCTCCATTGTTCATAAAGAGCTAGAAAGGGTAAGTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAACCAGCTCTCCATTGTTCATAAAGAGCTAGAAAGGGTAAGTTTAT  450

seq1  TCAGAAGTAAATATGCTGAGATGACAATTATGTCTAGCAAGTGAAAACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGTAAATATGCTGAGATGACAATTATGTCTAGCAAGTGAAAACTA  500

seq1  TATTACCCATCCTTAAAGAAGTGTAAGGATAACATTA  537
      |||||||||||||||||||||||||||||||||||||
seq2  TATTACCCATCCTTAAAGAAGTGTAAGGATAACATTA  537