BAC Information

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BAC

Clone NameB6Ng01-330K17
Chromosome12 (Build37)
Map Location 39,142,240 - 39,143,398
singlet/doubletsinglet
Overlap geneDgkb
Upstream geneLOC100043139
Downstream geneLOC668824, LOC100043142, Etv1, LOC100043145
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330K17.bB6Ng01-330K17.g
ACCGA117265GA117266
length1,2191,153
definitionB6Ng01-330K17.b B6Ng01-330K17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccatttttaatggggttatttgattt
tctgaagtccaccttcttgagttctttatatatgttggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttattgacgatgtcttttgccttgcagaaactttggagtttcat
taggtcccattcgtcaattctcgatcttacagcacaagccattgctgttc
tgttcaggaatttttcccctgtgcccatatcttcaaggcttttcctcact
ttctcctctataagtttcagtgtctctggttttatgtgaagttctttgat
ccatttagatttgaccttagtacaaggagataagtatggatcgattcgta
ttcttctacatgataacaaccagttgtgccagcaccaattgttgaaaatg
ctgtctttcttccactggatggttttagctcccttgtcgaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtctctataccagtaccatgcagtttttaccacaattgct
ctgtagtaaagctttaggtcaggcatggtgatcccaccagaggttctttt
atccttgagaagagtttttgctatcctaggttttttgttattccagatga
atttgcaaattgctccttctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaaaatagccatttt
tacaatgttgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttctttaatttctttcttcagagacttaaagtttttatcatac
agatctttcacttccttagttagagtcacgccgagatattttatattatt
tgtgactattgagaaggtgttgtttccctaatttctttctcagctgttta
ttctttgtgtagaggaaaggccattgacttgtttgagttaattttaatat
ccagctacttcacgagctgtttatcaagttaggagttctctgggtgcact
tttagggttcacttattaatactatccaatcaatctgccaaaagtggaat
attggactctcatcattgattccttgactcttatgtgtcgaattggctct
cgggctctacatcacttca

gaattcatcaccaaattggtttctgttgtgagtttttactacattagtac
caacagtgctccaagaggaagaacttgacataaacaagtttttgactcct
aaaattcggagctcatcaaacatcatttcagcatcattgccctggtccta
gtcaaactaaaccacaaggctagatttcaagtgacagagagaaatgttcc
cctggaagggagaaggaggacagtcccaagcatccagaatcaagcatcca
ggtaaaagatgaatctgaattattgaaaacttcttttgatatattcagtg
acagtaaagtaattataaatatgcttggcacttattataagcattttagt
aattatctgtattgcctgttatgttacatgacctttgagaaggtagtcta
ttaaaaagctataaactcaagaagtagttcattctttctgagtgttaata
gggaatctataattgtgtttgaatgagtaatggctaaaagcaatataaag
gcaaaccttgtttattttgatcattcataaatttccagcactgtaccaag
ggctgaaacataaagagacaccatccaacacataatgaatgaatgagtga
atgaacacctagtgaaatggctacacagaaatgaaggccttgctcatata
catagacctgtgaattttctaataggaactttcacaacatttacagacat
taaaatattatataaataagaatattctgaatgttgtatttgtaattata
aatcatggctcactccaaaagagtctctgggaattttatcttcttactga
tgggcacaaaatggcagaagattactatcaccaatctatataatcggttc
agtcaggaagcatctttcaatgagtcactagtgaaaatgagtaactgtga
ataaatagataataaaaatcagaatatgatgacgtcaatctgtatctagg
ttgatatctgtatcctgtactcagaactcaggactacttttgtgaataag
gtcttactttgtctgactgtttagaaaaccagacgacattttacttttgg
tatccatcaattatggcgctatgttttacatggaaagcacttggtggttt
ctgtgattgctgaaatgattattgaaagaacagtttatcttaaataaatg
ttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_39142240_39143398
seq2: B6Ng01-330K17.g_68_1220

seq1  GAATTCATCACCAAATTGGTTTCTGTTGTGAGTTTTTACTACATTAGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCACCAAATTGGTTTCTGTTGTGAGTTTTTACTACATTAGTAC  50

seq1  CAACAGTGCTCCAAGAGGAAGAACTTGACATAAACAAGTTTTTGACTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGTGCTCCAAGAGGAAGAACTTGACATAAACAAGTTTTTGACTCCT  100

seq1  AAAATTCGGAGCTCATCAAACATCATTTCAGCATCATTGCCCTGGTCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCGGAGCTCATCAAACATCATTTCAGCATCATTGCCCTGGTCCTA  150

seq1  GTCAAACTAAACCACAAGGCTAGATTTCAAGTGACAGAGAGAAATGTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAACTAAACCACAAGGCTAGATTTCAAGTGACAGAGAGAAATGTTCC  200

seq1  CCTGGAAGGGAGAAGGAGGACAGTCCCAAGCATCCAGAATCAAGCATCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAAGGGAGAAGGAGGACAGTCCCAAGCATCCAGAATCAAGCATCCA  250

seq1  GGTAAAAGATGAATCTGAATTATTGAAAACTTCTTTTGATATATTCAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAAGATGAATCTGAATTATTGAAAACTTCTTTTGATATATTCAGTG  300

seq1  ACAGTAAAGTAATTATAAATATGCTTGGCACTTATTATAAGCATTTTAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAAAGTAATTATAAATATGCTTGGCACTTATTATAAGCATTTTAGT  350

seq1  AATTATCTGTATTGCCTGTTATGTTACATGACCTTTGAGAAGGTAGTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCTGTATTGCCTGTTATGTTACATGACCTTTGAGAAGGTAGTCTA  400

seq1  TTAAAAAGCTATAAACTCAAGAAGTAGTTCATTCTTTCTGAGTGTTAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAGCTATAAACTCAAGAAGTAGTTCATTCTTTCTGAGTGTTAATA  450

seq1  GGGAATCTATAATTGTGTTTGAATGAGTAATGGCTAAAAGCAATATAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATCTATAATTGTGTTTGAATGAGTAATGGCTAAAAGCAATATAAAG  500

seq1  GCAAACCTTGTTTATTTTGATCATTCATAAATTTCCAGCACTGTACCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACCTTGTTTATTTTGATCATTCATAAATTTCCAGCACTGTACCAAG  550

seq1  GGCTGAAACATAAAGAGACACCATCCAACACATAATGAATGAATGAGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAAACATAAAGAGACACCATCCAACACATAATGAATGAATGAGTGA  600

seq1  ATGAACACCTAGTGAAATGGCTACACAGAAATGAAGGCCTTGCTCATATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACACCTAGTGAAATGGCTACACAGAAATGAAGGCCTTGCTCATATA  650

seq1  CATAGACCTGTGAATTTTCTAATAGGAACTTTCACAACATTTACAGACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGACCTGTGAATTTTCTAATAGGAACTTTCACAACATTTACAGACAT  700

seq1  TAAAATATTATATAAATAAGAATATTCTGAATGTTGTATTTGTAATTATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATTATATAAATAAGAATATTCTGAATGTTGTATTTGTAATTATA  750

seq1  AATCATGGCTCACTCCAAAAGAGTCTCTGGGAATTTTATCTTCTTACTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATGGCTCACTCCAAAAGAGTCTCTGGGAATTTTATCTTCTTACTGA  800

seq1  TGGGCACAAAATGGCAGAAGATTACTATCACCAATCTATATAATCGGTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCACAAAATGGCAGAAGATTACTATCACCAATCTATATAATCGGTTC  850

seq1  AGTCAGGAAGCATCTTTCAATGAGTCACTAGTGAAAATGAGTAACTGTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGGAAGCATCTTTCAATGAGTCACTAGTGAAAATGAGTAACTGTGA  900

seq1  ATAAATAGATAATAAAAATCAGAATATGATGACGTCAATCTGTATCTAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAGATAATAAAAATCAGAATATGATGACGTCAATCTGTATCTAGG  950

seq1  TTGATATCTGTATCCTGTACTCAGAACTCAGGACTACTTTTGTGAATAAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATATCTGTATCCTGTACTCAGAACTCAGGACTACTTTTGTGAATAAG  1000

seq1  GTTCTTACTTTGTTCTGACTGTTTAGAAAAACCAGACGACATTTTACTTT  1050
      | |||||||||| ||||||||||||| |||||||||||||||||||||||
seq2  G-TCTTACTTTG-TCTGACTGTTTAG-AAAACCAGACGACATTTTACTTT  1047

seq1  TGGTAATCCATCAATTATGGCGCTATGTTTTAACATGGGAAAAGCACTT-  1099
      |||| |||||||||||||||||||||||||| ||||||  ||||||||| 
seq2  TGGT-ATCCATCAATTATGGCGCTATGTTTT-ACATGG--AAAGCACTTG  1093

seq1  GTG--TTCTGGTGATTTGCTGAAATGATTATTGAA--GACAGTTTTATCT  1145
      |||  |||| |||| ||||||||||||||||||||   |||| |||||| 
seq2  GTGGTTTCT-GTGA-TTGCTGAAATGATTATTGAAAGAACAG-TTTATC-  1139

seq1  TTAAATAAATGTTT  1159
      ||||||||||||||
seq2  TTAAATAAATGTTT  1153


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