BAC Information

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BAC

Clone NameB6Ng01-330O18
Chromosome12 (Build37)
Map Location 85,085,677 - 85,208,507
singlet/doubletdoublet
Overlap genePapln, Numb
Upstream geneRgs6, Dpf3, Wdr21, Zfyve1, LOC626950, Rbm25, Psen1
Downstream geneLOC100042325, 2410016O06Rik, Acot2, Acot1, Acot4, Acot3, Acot5, LOC666963, Acot6, Dnalc1, Pnma1, C130039O16Rik, EG432676, Zadh1, Zfp410, 9830169C18Rik, Coq6, Entpd5, 2900006K08Rik, Rnf113a2, Aldh6a1, Lin52, Chx10, Abcd4, 7420416P09Rik, Tmem90a, Npc2, Isca2, Ltbp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330O18.bB6Ng01-330O18.g
ACCGA117435GA117436
length1,1581,164
definitionB6Ng01-330O18.b B6Ng01-330O18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,207,347 - 85,208,507)(85,085,677 - 85,086,829)
sequence
gaattctttatttctattttcctctttctggcagaatttcctggtggtgg
tcaattaagacaaaggactttccttctagagtccaggcagcttaaaaatg
ggtttctcaaaatcttttttctttgtgatatgtgcttactcgtcagagta
gccactgtatcttagtaagagaacttattggcaaaacaaccactggagca
gaaaactgacctgcctaatgctgatgagttgttgttttaaacctgtgaca
tgattcacaacattagaacaccggaccagccttttccttctttggaggta
gagggggcagaggtagaaaagaggataagaaaggatactgaactgctata
aaggattaagtaatacagtaaatgaatatttagttatctgtagtcatttt
gatcaaagcctttcattaagtataatttgaaggcctctaaaacgtagcag
ttcccaaatcacattaaacaaataaaggtgtaggtgagcctagagccttt
tctctatagagatctagagaagcccacgagctgtgttttagctgagttca
cagttcctcattgtgtgtgttagctttactctttacgtctttatttattt
aaaattgtaataaacagtaaaggagagattcatagtattaggaactttta
gaggtaactggcttggtgacagcgtgaaagtggttaagtaagggcagcta
ctttgaagaggcggtacttgagcaaggctctgaaggatatatacagatca
atttcagggaaagtaatggcttgtgagaactatggactgcagactttgag
atgagaatcatggaagatttaaagctttaaagaaagctgagatagttgtt
ggcactttgtaagccatagtaaggatttttcttacagtttccctttttct
tccatctctaatctgatcattaatatgatgctacttttcattagtctcct
ctgtcccagacagatgtattttattctatagaattatgttaggtatcttt
tattgataaatctaaatttggtactatagtagattcagaaatgtggctat
tctgcagttctggaacctcaaacaggtcttaataacataactgtgtcctc
aggcttaacagttaacttagtatcaactaagttaatggtaaggtagcctc
catgactt
gaattctcttttgatcacagccaacttgaccacacacaaaatttcttgta
taaaatcatttttcagctgggtgtggaggcacatgcctttgatcccagca
ttcaggaggctgagggaggaggcctcagggcccaaggccagctttggctt
cataagtcaacaagaccctgtctcaaaagccaagatttctccttcaccag
cctttcacacctccctctgctcttgagggcatcagttgccctgatatctt
gaagatccaagagggctggcttgtgggtgctcctgcagtcacagggaacc
tgaggcaagaagattagtggaattcagaaactcagggccagcctggacac
catggtaatggcccttccagagggacaagggaaacctaacacataaatca
atctaaaactgcaataaaccagcatttaaggacagccttaagtttttaaa
aatatgatttctcacagatatttttttcaatatggaataagatacagtta
ctaagagactagataaattttgtctcaataagagatttaaaaaaccgcat
tttggaatccagaaccacacattttgtgagtatcttcagtgggcataata
atgtaagtataagatttcaaatggcataacagtgtttgtttcttttattt
acatttagtttatctttttagctttattggtttcgttttatatgtatgag
tatttacctgcaccacatgcatgcctgatgcccacagaagtcaaactagg
gcatcagatcccctgtgactggagtttctcatggctgtaatggttgtgag
ctgtcatgtggtactaggaaccgaaccagggtcttctggaagaacagcaa
gcgctcttaactgtggagccatctctccagccaccccccaccttcattcc
tgacacagggtctcagcatgttgcccacactggctttgagactagttttt
gccttctcaaaaacaaagacaaaaataacccccaaaaagctggaatgtac
tgtagctccacggtattgttgcccagtgtacctgccaatcctgcattcag
aatcccagatgaccacccacacaaacctcccacctcccataacctcagtt
tcattgatagttacacctccacactgctaggacaggcagttggaactgtg
tgttaggaaacaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_85207347_85208507
seq2: B6Ng01-330O18.b_50_1207 (reverse)

seq1  AAGTCATGGA-GCTACACTTAACATTAAACTTAGTTTGATACTAAAGTAA  49
      |||||||||| ||||| |||| |||| ||||||| ||||||||||  |||
seq2  AAGTCATGGAGGCTAC-CTTACCATT-AACTTAG-TTGATACTAAGTTAA  47

seq1  CTGTTTAGGCTGAGGACACAGTTATGT--ATAGAACCTGGTTTGA-GTTC  96
      ||||| || ||||||||||||||||||   ||  |||| |||||| ||||
seq2  CTGTTAAGCCTGAGGACACAGTTATGTTATTAAGACCT-GTTTGAGGTTC  96

seq1  CAGCACTGCAGAATAGCCACATTTTCCTGAATCTACTATAGTACCAAATT  146
      ||| ||||||||||||||||||||  ||||||||||||||||||||||||
seq2  CAGAACTGCAGAATAGCCACATTT--CTGAATCTACTATAGTACCAAATT  144

seq1  TAGAATTTTATCAATAAAAGATACCTAACATAATTCTATAGAAT-AAATA  195
      ||||  |||||||||||||||||||||||||||||||||||||| |||||
seq2  TAGA--TTTATCAATAAAAGATACCTAACATAATTCTATAGAATAAAATA  192

seq1  CATCTGTCTGGGACAGAGGAGACTAATGAAAAGTAGCATCATATTAATGA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTCTGGGACAGAGGAGACTAATGAAAAGTAGCATCATATTAATGA  242

seq1  TCAGATTAGAGATGGAAGAAAAAGGGAAACTGTAAGAAAAATCCTTACTA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTAGAGATGGAAGAAAAAGGGAAACTGTAAGAAAAATCCTTACTA  292

seq1  TGGCTTACAAAGTGCCAACAACTATCTCAGCTTTCTTTAAAGCTTTAAAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTACAAAGTGCCAACAACTATCTCAGCTTTCTTTAAAGCTTTAAAT  342

seq1  CTTCCATGATTCTCATCTCAAAGTCTGCAGTCCATAGTTCTCACAAGCCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATGATTCTCATCTCAAAGTCTGCAGTCCATAGTTCTCACAAGCCA  392

seq1  TTACTTTCCCTGAAATTGATCTGTATATATCCTTCAGAGCCTTGCTCAAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTCCCTGAAATTGATCTGTATATATCCTTCAGAGCCTTGCTCAAG  442

seq1  TACCGCCTCTTCAAAGTAGCTGCCCTTACTTAACCACTTTCACGCTGTCA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCGCCTCTTCAAAGTAGCTGCCCTTACTTAACCACTTTCACGCTGTCA  492

seq1  CCAAGCCAGTTACCTCTAAAAGTTCCTAATACTATGAATCTCTCCTTTAC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCCAGTTACCTCTAAAAGTTCCTAATACTATGAATCTCTCCTTTAC  542

seq1  TGTTTATTACAATTTTAAATAAATAAAGACGTAAAGAGTAAAGCTAACAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATTACAATTTTAAATAAATAAAGACGTAAAGAGTAAAGCTAACAC  592

seq1  ACACAATGAGGAACTGTGAACTCAGCTAAAACACAGCTCGTGGGCTTCTC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAATGAGGAACTGTGAACTCAGCTAAAACACAGCTCGTGGGCTTCTC  642

seq1  TAGATCTCTATAGAGAAAAGGCTCTAGGCTCACCTACACCTTTATTTGTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCTCTATAGAGAAAAGGCTCTAGGCTCACCTACACCTTTATTTGTT  692

seq1  TAATGTGATTTGGGAACTGCTACGTTTTAGAGGCCTTCAAATTATACTTA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTGATTTGGGAACTGCTACGTTTTAGAGGCCTTCAAATTATACTTA  742

seq1  ATGAAAGGCTTTGATCAAAATGACTACAGATAACTAAATATTCATTTACT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGGCTTTGATCAAAATGACTACAGATAACTAAATATTCATTTACT  792

seq1  GTATTACTTAATCCTTTATAGCAGTTCAGTATCCTTTCTTATCCTCTTTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTACTTAATCCTTTATAGCAGTTCAGTATCCTTTCTTATCCTCTTTT  842

seq1  CTACCTCTGCCCCCTCTACCTCCAAAGAAGGAAAAGGCTGGTCCGGTGTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTCTGCCCCCTCTACCTCCAAAGAAGGAAAAGGCTGGTCCGGTGTT  892

seq1  CTAATGTTGTGAATCATGTCACAGGTTTAAAACAACAACTCATCAGCATT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGTTGTGAATCATGTCACAGGTTTAAAACAACAACTCATCAGCATT  942

seq1  AGGCAGGTCAGTTTTCTGCTCCAGTGGTTGTTTTGCCAATAAGTTCTCTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGTCAGTTTTCTGCTCCAGTGGTTGTTTTGCCAATAAGTTCTCTT  992

seq1  ACTAAGATACAGTGGCTACTCTGACGAGTAAGCACATATCACAAAGAAAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGATACAGTGGCTACTCTGACGAGTAAGCACATATCACAAAGAAAA  1042

seq1  AAGATTTTGAGAAACCCATTTTTAAGCTGCCTGGACTCTAGAAGGAAAGT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTTGAGAAACCCATTTTTAAGCTGCCTGGACTCTAGAAGGAAAGT  1092

seq1  CCTTTGTCTTAATTGACCACCACCAGGAAATTCTGCCAGAAAGAGGAAAA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGTCTTAATTGACCACCACCAGGAAATTCTGCCAGAAAGAGGAAAA  1142

seq1  TAGAAATAAAGAATTC  1161
      ||||||||||||||||
seq2  TAGAAATAAAGAATTC  1158

seq1: chr12_85085677_85086829
seq2: B6Ng01-330O18.g_70_1233

seq1  GAATTCTCTTTTGATCACAGCCAACTTGACCACACACAAAATTTCTTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTTGATCACAGCCAACTTGACCACACACAAAATTTCTTGTA  50

seq1  TAAAATCATTTTTCAGCTGGGTGTGGAGGCACATGCCTTTGATCCCAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCATTTTTCAGCTGGGTGTGGAGGCACATGCCTTTGATCCCAGCA  100

seq1  TTCAGGAGGCTGAGGGAGGAGGCCTCAGGGCCCAAGGCCAGCTTTGGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGAGGCTGAGGGAGGAGGCCTCAGGGCCCAAGGCCAGCTTTGGCTT  150

seq1  CATAAGTCAACAAGACCCTGTCTCAAAAGCCAAGATTTCTCCTTCACCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGTCAACAAGACCCTGTCTCAAAAGCCAAGATTTCTCCTTCACCAG  200

seq1  CCTTTCACACCTCCCTCTGCTCTTGAGGGCATCAGTTGCCCTGATATCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCACACCTCCCTCTGCTCTTGAGGGCATCAGTTGCCCTGATATCTT  250

seq1  GAAGATCCAAGAGGGCTGGCTTGTGGGTGCTCCTGCAGTCACAGGGAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATCCAAGAGGGCTGGCTTGTGGGTGCTCCTGCAGTCACAGGGAACC  300

seq1  TGAGGCAAGAAGATTAGTGGAATTCAGAAACTCAGGGCCAGCCTGGACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCAAGAAGATTAGTGGAATTCAGAAACTCAGGGCCAGCCTGGACAC  350

seq1  CATGGTAATGGCCCTTCCAGAGGGACAAGGGAAACCTAACACATAAATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTAATGGCCCTTCCAGAGGGACAAGGGAAACCTAACACATAAATCA  400

seq1  ATCTAAAACTGCAATAAACCAGCATTTAAGGACAGCCTTAAGTTTTTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAACTGCAATAAACCAGCATTTAAGGACAGCCTTAAGTTTTTAAA  450

seq1  AATATGATTTCTCACAGATATTTTTTTCAATATGGAATAAGATACAGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGATTTCTCACAGATATTTTTTTCAATATGGAATAAGATACAGTTA  500

seq1  CTAAGAGACTAGATAAATTTTGTCTCAATAAGAGATTTAAAAAACCGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAGACTAGATAAATTTTGTCTCAATAAGAGATTTAAAAAACCGCAT  550

seq1  TTTGGAATCCAGAACCACACATTTTGTGAGTATCTTCAGTGGGCATAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAATCCAGAACCACACATTTTGTGAGTATCTTCAGTGGGCATAATA  600

seq1  ATGTAAGTATAAGATTTCAAATGGCATAACAGTGTTTGTTTCTTTTATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAGTATAAGATTTCAAATGGCATAACAGTGTTTGTTTCTTTTATTT  650

seq1  ACATTTAGTTTATCTTTTTAGCTTTATTGGTTTCGTTTTATATGTATGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTAGTTTATCTTTTTAGCTTTATTGGTTTCGTTTTATATGTATGAG  700

seq1  TATTTACCTGCACCACATGCATGCCTGATGCCCACAGAAGTCAAACTAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACCTGCACCACATGCATGCCTGATGCCCACAGAAGTCAAACTAGG  750

seq1  GCATCAGATCCCCTGTGACTGGAGTTTCTCATGGCTGTAATGGTTGTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGATCCCCTGTGACTGGAGTTTCTCATGGCTGTAATGGTTGTGAG  800

seq1  CTGTCATGTGGTACTAGGAACCGAACCAGGGTCTTCTGGAAGAACAGCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCATGTGGTACTAGGAACCGAACCAGGGTCTTCTGGAAGAACAGCAA  850

seq1  GCGCTCTTAACTGTGGAGCCATCTCTCCAGCCA-CCCCCACCTTCATTCC  899
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GCGCTCTTAACTGTGGAGCCATCTCTCCAGCCACCCCCCACCTTCATTCC  900

seq1  TGACACAGGGTCTCAGCATGTTGCCCACACTGGCTTTGAGACTAGTTTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACAGGGTCTCAGCATGTTGCCCACACTGGCTTTGAGACTAGTTTTT  950

seq1  GCCTTCTCAAAAACAAAGACAAAAATAACCCCC-AAAAGCTGGGAATGTA  998
      ||||||||||||||||||||||||||||||||| ||||||| ||||||||
seq2  GCCTTCTCAAAAACAAAGACAAAAATAACCCCCAAAAAGCT-GGAATGTA  999

seq1  CTGTAGCTCCACGGTAT--GTGCCCAGTGTACCTGCC-ATCCTGCATTCA  1045
      |||||||||||||||||   ||||||||||||||||| ||||||||||||
seq2  CTGTAGCTCCACGGTATTGTTGCCCAGTGTACCTGCCAATCCTGCATTCA  1049

seq1  G-ATCCCAGAATGACCACCACCACAAACCT-CCACC-CCCATA--CTCAG  1090
      | ||||||| |||||||||  ||||||||| ||||| ||||||  |||||
seq2  GAATCCCAG-ATGACCACCCACACAAACCTCCCACCTCCCATAACCTCAG  1098

seq1  GTTCATTGATAG-TACACTCACACCTTGGCTAGGACAGGCAGGTTGGACT  1139
       ||||||||||| |||||   |||  | |||||||||||||| | | |||
seq2  TTTCATTGATAGTTACACCTCCACACT-GCTAGGACAGGCAGTTGGAACT  1147

seq1  GTG---TAAGAAACACA  1153
      |||   || ||||||||
seq2  GTGTGTTAGGAAACACA  1164