BAC Information

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BAC

Clone NameB6Ng01-330P10
Chromosome12 (Build37)
Map Location 29,644,086 - 29,645,203
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC669327, 1110015M06Rik, Allc, Colec11, Rps7, Rnaseh1, Adi1, Ttc15, Tssc1
Downstream gene4833405L11Rik, LOC629608, Myt1l, LOC100043496, Pxdn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330P10.bB6Ng01-330P10.g
ACCGA117463GA117464
length1,1321,191
definitionB6Ng01-330P10.b B6Ng01-330P10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgaactcttctgaacaccttgaaagtgggtgtcttagggttg
ccattgctgagaagaaacaacatgatcaaggcaactcttataaaggcaaa
catttaattagggctggcttacagtttcagaggttcagtccattatcatg
acaggaagcatggcaacctgcaggcagacaatgtgctggagtagtcaaga
gttctatatcttgattcggaggtagccagaaggagggtttctttcctcac
tgagtgaaacttgagcataggaatctcaaagcccacccccacagtgatac
acatcatccaacaaggccacagccttcaacattgccaagctgctcatagt
gctactccctgggccaaacatactcaaaccaccaccaggggtttctcatg
cctggtgttgaggctgttagtttatggctcttctgggccaagtggggagg
aattattggcagcacaattgacatatgtttagttaaataatatgtgtaga
gagcagagaatgctgtgagtgcctgaagtcccaagtaaatgtgtgttgtc
catgggcagggccatggtgaggactccaatgcctaaggttcgcaggagcg
gcatatccttaccaggacgaggctggagggattatgaagcttttcttggt
gtctgagtatgagtgtttatagagattgatcagtgtatgcagagactagc
aactaaggcttcctcttccaggatgtttatagtctgaggctgctagacta
cagagacatcctacagagctagatgaccctctgtctgtgctgatgtaata
aacatgctgaggtttatgggctgctggtggtagtacatacttccatcaga
gtaaacacacccctaccttgaccccagcttttcctgcgttttcgtgtatg
tctgtccttttcttcattgtcttaccatcctatggattctagcaccccat
gcctatgcatggggtcacagcatacatgtcctgtgtgtattttatggtct
attgtgtaattattgtaattatgtcagagacttagtacttgcatgttttc
ctttccctgtgacatatgaatggtgaacaccttttttgtgggtgtcttta
attacttctatgacaattttggaagaaatagt

gaattcatttgttgaattaaacaatgtttggaagagattattttgtgatg
aaaaatcatcaaagagcttggcataaaaagaaaaccaaatagaaatattg
gaacaaatgaattcaacaaataaaatagaaaatctagttgagaacctcaa
gatcagaataaatcaaactaaagaaaatatgtactaactagaagacaaat
ctctgaaaataacccactgttggggctggcctgcggctctcatgtctggg
ttcgagcctggaggcaacctggagctgaaacaaaagagggaaactaggca
gacaagagagagagagatggaaccaagacaggattctgatcaaggctcaa
atttttaatggtggacatgctttataaaggagggggaagcccattcccgc
caaatcatccttggagcccagctgcaggtaaccatgtataggctccagaa
tagctaggcagactcccagcaggtagcagcagctgcagtggctgaacaat
agagtgatctagggaggcaggctccaccctaggtgatctccttagtggga
tagcaaggtcaaggtctgtctccgcctgctttcaggcttgtgggaagcta
caacccaccaagaatcaaaggagtcagaaggaatttaaaaagaatgaagt
ctacacaagtcttacagaaaggaacaagaagtataaaaagaggtagagat
aaaaagggtacaagagtattcatttccaataaaagcctttgaatgtaaac
agttaattctccgattgaaaaaaacataggctagctgaacatattttaaa
aaataaaggtccaatgaccatactgcctagaagaaactagtttccacagc
aaagacacacaggacctgaaagtgagagacagaagaaggccacctacaca
aaaagaatcaactgtgatcaggaatctcagcaccagtcttgtccatgaca
gttaaaagaagtgaggagggtagcatctatgatgacgtatcattcatcca
aagaaattagttagatgatatgtgtgccaatgctgagcgctcgatatacg
agaggggtagccccagtaccaacaatcaatgccttctctgatcagtcatc
gccgatgcagctcagcaccgacttctatgccgatcacagcttgaatgttg
ggtacgatccatagataacctatagagaacaatgtgacagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_29644086_29645203
seq2: B6Ng01-330P10.b_48_1179

seq1  GAATTCTTTGAACTCTTCTGAACACCTTGAAAGTGGGTGTCTTAGGGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGAACTCTTCTGAACACCTTGAAAGTGGGTGTCTTAGGGTTG  50

seq1  CCATTGCTGAGAAGAAACAACATGATCAAGGCAACTCTTATAAAGGCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGCTGAGAAGAAACAACATGATCAAGGCAACTCTTATAAAGGCAAA  100

seq1  CATTTAATTAGGGCTGGCTTACAGTTTCAGAGGTTCAGTCCATTATCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAATTAGGGCTGGCTTACAGTTTCAGAGGTTCAGTCCATTATCATG  150

seq1  ACAGGAAGCATGGCAACCTGCAGGCAGACAATGTGCTGGAGTAGTCAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAGCATGGCAACCTGCAGGCAGACAATGTGCTGGAGTAGTCAAGA  200

seq1  GTTCTATATCTTGATTCGGAGGTAGCCAGAAGGAGGGTTTCTTTCCTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATATCTTGATTCGGAGGTAGCCAGAAGGAGGGTTTCTTTCCTCAC  250

seq1  TGAGTGAAACTTGAGCATAGGAATCTCAAAGCCCACCCCCACAGTGATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGAAACTTGAGCATAGGAATCTCAAAGCCCACCCCCACAGTGATAC  300

seq1  ACATCATCCAACAAGGCCACAGCCTTCAACATTGCCAAGCTGCTCATAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCATCCAACAAGGCCACAGCCTTCAACATTGCCAAGCTGCTCATAGT  350

seq1  GCTACTCCCTGGGCCAAACATACTCAAACCACCACCAGGGGTTTCTCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTCCCTGGGCCAAACATACTCAAACCACCACCAGGGGTTTCTCATG  400

seq1  CCTGGTGTTGAGGCTGTTAGTTTATGGCTCTTCTGGGCCAAGTGGGGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTGTTGAGGCTGTTAGTTTATGGCTCTTCTGGGCCAAGTGGGGAGG  450

seq1  AATTATTGGCAGCACAATTGACATATGTTTAGTTAAATAATATGTGTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTGGCAGCACAATTGACATATGTTTAGTTAAATAATATGTGTAGA  500

seq1  GAGCAGAGAATGCTGTGAGTGCCTGAAGTCCCAAGTAAATGTGTGTTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGAGAATGCTGTGAGTGCCTGAAGTCCCAAGTAAATGTGTGTTGTC  550

seq1  CATGGGCAGGGCCATGGTGAGGACTCCAATGCCTAAGGTTCGCAGGAGCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGCAGGGCCATGGTGAGGACTCCAATGCCTAAGGTTCGCAGGAGCG  600

seq1  GCATATCCTTACCAGGACGAGGCTGGAGGGATTATGAAGCTTTTCTTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATCCTTACCAGGACGAGGCTGGAGGGATTATGAAGCTTTTCTTGGT  650

seq1  GTCTGAGTATGAGTGTTTATAGAGATTGATCAGTGTATGCAGAGACTAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAGTATGAGTGTTTATAGAGATTGATCAGTGTATGCAGAGACTAGC  700

seq1  AACTAAGGCTTCCTCTTCCAGGATGTTTATAGTCTGAGGCTGCTAGACTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGGCTTCCTCTTCCAGGATGTTTATAGTCTGAGGCTGCTAGACTA  750

seq1  CAGAGACATCCTACAGAGCTAGATGACCCTCTGTCTGTGCTGATGTAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACATCCTACAGAGCTAGATGACCCTCTGTCTGTGCTGATGTAATA  800

seq1  AACATGCTGAGG-TTATGGGCTGCTGGTGGTAGTACATACTTCCATCAGA  849
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AACATGCTGAGGTTTATGGGCTGCTGGTGGTAGTACATACTTCCATCAGA  850

seq1  GTAAACACACCCCTACCTTGACCCCAGC-TTTCCTGCG-TTTCGTGTATG  897
      |||||||||||||||||||||||||||| ||||||||| |||||||||||
seq2  GTAAACACACCCCTACCTTGACCCCAGCTTTTCCTGCGTTTTCGTGTATG  900

seq1  TCTGTCC-TTTCTTCATTGTCTTACCATCCTATGGATTCTAGCA-CCCAT  945
      ||||||| |||||||||||||||||||||||||||||||||||| |||||
seq2  TCTGTCCTTTTCTTCATTGTCTTACCATCCTATGGATTCTAGCACCCCAT  950

seq1  GCCTATGCAT-GGGTCACAGCATACATGT-CTGTGTGTA-TTTAT-GTCT  991
      |||||||||| |||||||||||||||||| ||||||||| ||||| ||||
seq2  GCCTATGCATGGGGTCACAGCATACATGTCCTGTGTGTATTTTATGGTCT  1000

seq1  ATTGTGTAATTA-TGTAATTATGTCAGAGACTTAGTAC-TGCATGTTTTT  1039
      |||||||||||| ||||||||||||||||||||||||| |||||||||| 
seq2  ATTGTGTAATTATTGTAATTATGTCAGAGACTTAGTACTTGCATGTTTTC  1050

seq1  CCTTTCCTGTGACTAATG-ATGGTGAACACC-TTTTTGTGTGTGTCTTTA  1087
      | || ||||||||  ||| |||||||||||| |||||||| |||||||||
seq2  CTTTCCCTGTGACATATGAATGGTGAACACCTTTTTTGTGGGTGTCTTTA  1100

seq1  TTACCTTTTATGACCATTTTGG-AGAAATAGT  1118
       |  ||| |||||| ||||||| |||||||||
seq2  ATTACTTCTATGACAATTTTGGAAGAAATAGT  1132


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