BAC Information

Click to search

BAC

Clone NameB6Ng01-331P14
Chromosome12 (Build37)
Map Location 47,008,132 - 47,008,779
singlet/doubletsinglet
Overlap genenone
Upstream geneStxbp6
Downstream geneLOC664952, Nova1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331P14.bB6Ng01-331P14.g
ACCGA118206GA118207
length993920
definitionB6Ng01-331P14.b B6Ng01-331P14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccataaccaatgtaaagtgtaaccaactctggacagcccttggac
atctatatggtcccagacaggagcctagatgagggatgttttcatgggca
agataactttcagggaggcagggaaggaaaggacatccttagtgtcatat
gggaagaggcttctttaatatatacatatatgaaagaaatctaattggaa
ccaccaaaaaaaaaaaaaaatagaaaagacaaagtctcaaataaccatct
cttctcaccaaatgaaacctccagttccataagtgggtcacatctaattg
agatattggtcaaagttgccccacaaaagtactctgccccccatccccag
tctattcccaaagctattggttgatttccagaaattaatggtaggaccca
attggtaaagacaatgcctctacaactcactggacacaaagaagtcaaac
tattgtctatctagagactttataagcactagagacttcaaaactaacta
cagaccttgagtttatggtaatggaaggaattctgcacactatcaatgga
gaaaggtagctaccaacttagttacaaaaaccgcaatctacaatggtgac
atgcctgtctgtaagatatgttgttacaatggtgtcacaaaagttgaaga
gtagccaactacttcataattggaattaaagctagaattaaagcccactc
catgagatggaatcacatgtctgactctgcctgagtggacaagctaagct
agctaagatatagacctagagaaatactgaatactcctgtgcttctcaag
aaatgtagcaatagaacgacttctaatattgttctgctatactcatagat
aattatcttattcactcatcacctgagaaccttcttcctgtacttgatgg
gaagaagtacagagatgcacaactagacaatatgcagagagtcagagact
ttgtaacactataaccctaaatgggattatagccatcaaatcc
gaattctcacctgagaaatactgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagataaaaaattctggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccgaaggatccagcaatacctctcctgggc
atacatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcaaccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatatttgcccaaaaca
taggatatccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatacccctccttagaagtgggaa
caaaacacccttgaaaggaggtacagagacaaagtttggagctgagataa
aaagatggaccatgtagagactgccacacatgggtttatagagcagaggc
ctggctatctttgagtctgtccagcagcttttacagtctcagcctattct
cgtgctagaaaatatcctttagagtggaagccagtgcatgtggtttctct
tacctctcccttagttgtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_47008132_47008779
seq2: B6Ng01-331P14.b_45_694

seq1  GAATTCCATAACCAATGTAAAGTGTAACCAACTCTGGACAGCCCTTGGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAACCAATGTAAAGTGTAACCAACTCTGGACAGCCCTTGGAC  50

seq1  ATCTATATGGTCCCAGACAGGAGCCTAGATGAGGGATGTTTTCATGGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATATGGTCCCAGACAGGAGCCTAGATGAGGGATGTTTTCATGGGCA  100

seq1  AGATAACTTTCAGGGAGGCAGGGAAGGAAAGGACATCCTTAGTGTCATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAACTTTCAGGGAGGCAGGGAAGGAAAGGACATCCTTAGTGTCATAT  150

seq1  GGGAAGAGGCTTCTTTAATATATACATATATGAAAGAAATCTAATTGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGAGGCTTCTTTAATATATACATATATGAAAGAAATCTAATTGGAA  200

seq1  CCACC--AAAAAAAAAAAAATAGAAAAGACAAAGTCTCAAATAACCATCT  248
      |||||  |||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAAAAAAAAAAAAAAATAGAAAAGACAAAGTCTCAAATAACCATCT  250

seq1  CTTCTCACCAAATGAAACCTCCAGTTCCATAAGTGGGTCACATCTAATTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCACCAAATGAAACCTCCAGTTCCATAAGTGGGTCACATCTAATTG  300

seq1  AGATATTGGTCAAAGTTGCCCCACAAAAGTACTCTGCCCCCCATCCCCAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTGGTCAAAGTTGCCCCACAAAAGTACTCTGCCCCCCATCCCCAG  350

seq1  TCTATTCCCAAAGCTATTGGTTGATTTCCAGAAATTAATGGTAGGACCCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCCCAAAGCTATTGGTTGATTTCCAGAAATTAATGGTAGGACCCA  400

seq1  ATTGGTAAAGACAATGCCTCTACAACTCACTGGACACAAAGAAGTCAAAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTAAAGACAATGCCTCTACAACTCACTGGACACAAAGAAGTCAAAC  450

seq1  TATTGTCTATCTAGAGACTTTATAAGCACTAGAGACTTCAAAACTAACTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCTATCTAGAGACTTTATAAGCACTAGAGACTTCAAAACTAACTA  500

seq1  CAGACCTTGAGTTTATGGTAATGGAAGGAATTCTGCACACTATCAATGGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCTTGAGTTTATGGTAATGGAAGGAATTCTGCACACTATCAATGGA  550

seq1  GAAAGGTAGCTACCAACTTAGTTACAAAAACCGCAATCTACAATGGTGAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTAGCTACCAACTTAGTTACAAAAACCGCAATCTACAATGGTGAC  600

seq1  ATGCCTGTCTGTAAGATATGTTGTTACAATGGTGTCACAAAAGTTGAAGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTGTCTGTAAGATATGTTGTTACAATGGTGTCACAAAAGTTGAAGA  650