BAC Information

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BAC

Clone NameB6Ng01-334E08
Chromosome12 (Build37)
Map Location 59,077,931 - 59,078,980
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc25a21, AU021838, LOC100040044, Foxa1, 4921506M07Rik, EG217600, BC042761
Downstream geneSstr1, Clec14a, LOC100040183, Sec23a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334E08.bB6Ng01-334E08.g
ACCGA119815GA119816
length1,1461,116
definitionB6Ng01-334E08.b B6Ng01-334E08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttctcagagatttgaagtttttatcatac
agatctttcacctccttagttagagtccacgccaagatatttatattatt
tgtgactattgagaagggtgtgtttccctaatttcttctcagcctgttta
ttctttgtatagaggaaggccattgacttgttggagtttattttataatc
cagcttactttcaccggaagctgtttatcaggtttagagttctctggtag
aattttaggggtcactttaatatgctatccatccatctgcaacaag
gaattcacttctctattgattctgatagatagttttcctggatataatag
tcctggcttgtatctttggtatcttagaatctgtagaacatctttccaga
cccttctggcttttagaatcttcactaaaaatcagatgccattcaaatac
atctgcattttatgtgacttggtcctttttcctttgtagcccttaatatc
ataactttgttctgtacatttagtattttgaactttattagtcatgagaa
ttttttttctggtcttatctatttggtgttctgtatgctccttatatctt
gataagcactcctttcttagactagggatttttttctacaactatcttaa
aatattttctgtgttcttgacctgtattttttctccttgttctacccctg
ttacttgaagttttgttcttgtcatagtaccctcaaatttcttggatgtt
ttgttttaaatttaacatgtcttggatgttagttttacattttacatatt
tttaaaatttaacattttgactgagttatcaatttcttctaccttgtctt
caagacctgaaaatctcatgtctaatcttatatatttccctctggcaggg
aaggagcacagagggctgaggatctgctccacctccattttgtagcttct
aattttgatattttgataacaaagatattttcatatcttaaataccttag
tactgaaggcaacatacactttggatacaggttacaaagaaaaatttggg
gacaaatctagaagcttcctccctaatgattagtttcaaaatgcttatta
tgtgatgtgttgagaaaggaaagtcttcaataatacagttcaactgttga
tcctatgtgctatagtagtgacctaccaggagagatgtacatatgggcgc
atggatattccaggagtaacaaacattgatgtcaaaggagccttgagaaa
tcatctatcatcatctatcatctatctatcatcatcatcatcatctacct
actgaatatgtatgtatatgtgatcatatgagttatttatgcccatgaat
gagatgtcaacagagactggaagggacaccaaatgtatttacgttgtgtg
aactgcctgatatgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_59077931_59078980
seq2: B6Ng01-334E08.g_153_1182

seq1  AACATCTTTCCAGACCCTTCTGGCTTTTAGAATCTTCACTAAAAATCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTTTCCAGACCCTTCTGGCTTTTAGAATCTTCACTAAAAATCAGA  50

seq1  TGCCATTCAAATACATCTGCATTTTATGTGACTTGGTCCTTTTTCCTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTCAAATACATCTGCATTTTATGTGACTTGGTCCTTTTTCCTTTG  100

seq1  TAGCCCTTAATATCATAACTTTGTTCTGTACATTTAGTATTTTGAACTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCTTAATATCATAACTTTGTTCTGTACATTTAGTATTTTGAACTTT  150

seq1  ATTAGTCATGAGAATTTTTTTTCTGGTCTTATCTATTTGGTGTTCTGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTCATGAGAATTTTTTTTCTGGTCTTATCTATTTGGTGTTCTGTAT  200

seq1  GCTCCTTATATCTTGATAAGCACTCCTTTCTTAGACTAGGGATTTTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTATATCTTGATAAGCACTCCTTTCTTAGACTAGGGATTTTTTTC  250

seq1  TACAACTATCTTAAAATATTTTCTGTGTTCTTGACCTGTATTTTTTCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACTATCTTAAAATATTTTCTGTGTTCTTGACCTGTATTTTTTCTCC  300

seq1  TTGTTCTACCCCTGTTACTTGAAGTTTTGTTCTTGTCATAGTACCCTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTACCCCTGTTACTTGAAGTTTTGTTCTTGTCATAGTACCCTCAA  350

seq1  ATTTCTTGGATGTTTTGTTTTAAATTTAACATGTCTTGGATGTTAGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTGGATGTTTTGTTTTAAATTTAACATGTCTTGGATGTTAGTTTT  400

seq1  ACATTTTACATATTTTTAAAATTTAACATTTTGACTGAGTTATCAATTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTACATATTTTTAAAATTTAACATTTTGACTGAGTTATCAATTTC  450

seq1  TTCTACCTTGTCTTCAAGACCTGAAAATCTCATGTCTAATCTTATATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACCTTGTCTTCAAGACCTGAAAATCTCATGTCTAATCTTATATATT  500

seq1  TCCCTCTGGCAGGGAAGGAGCACAGAGGGCTGAGGATCTGCTCCACCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTGGCAGGGAAGGAGCACAGAGGGCTGAGGATCTGCTCCACCTCC  550

seq1  ATTTTGTAGCTTCTAATTTTGATATTTTGATAACAAAGATATTTTCATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTAGCTTCTAATTTTGATATTTTGATAACAAAGATATTTTCATAT  600

seq1  CTTAAATACCTTAGTACTGAAGGCAACATACACTTTGGATACAGGTTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATACCTTAGTACTGAAGGCAACATACACTTTGGATACAGGTTACA  650

seq1  AAGAAAAATTTGGGGACAAATCTAGAAGCTTCCTCCCTAATGATTAGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAATTTGGGGACAAATCTAGAAGCTTCCTCCCTAATGATTAGTTT  700

seq1  CAAAATGCTTATTATGTGATGTGTTGAGAAAGGAAAGTCTTCAATAATAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGCTTATTATGTGATGTGTTGAGAAAGGAAAGTCTTCAATAATAC  750

seq1  AGTTCAACTGTTGATCCTATGTGCTATAGTAGTGACCTACCAGGAGAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAACTGTTGATCCTATGTGCTATAGTAGTGACCTACCAGGAGAGAT  800

seq1  GTACATATGGGCGCATGGATATTCCAGGAGTAACAAACATTGATGTCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATATGGGCGCATGGATATTCCAGGAGTAACAAACATTGATGTCAAA  850

seq1  GGAGCCTTGAGATATCTATCTATCTATCTATCTATCTATCTATCTATCTA  900
      |||||||||||| ||| ||||||| ||| ||||||| ||||||||||| |
seq2  GGAGCCTTGAGAAATC-ATCTATC-ATC-ATCTATC-ATCTATCTATC-A  895

seq1  TCTATCTATCTATCTATCTACCTACTTTTATATTATGTATGTATATGTGA  950
      || ||| ||| ||| |||||||||||     | |||||||||||||||||
seq2  TC-ATC-ATC-ATC-ATCTACCTACT----GAATATGTATGTATATGTGA  937

seq1  TCATATGAGTTTATTTATGCCACATGAATGAAGATGTCAACAGAGACCTG  1000
      ||||||||| ||||||||||| |||||||| ||||||||||||||| |||
seq2  TCATATGAG-TTATTTATGCC-CATGAATG-AGATGTCAACAGAGA-CTG  983

seq1  GAGAGGACACAAAATGTAATTACAGTTGGTTGTGAACTGCCTGATATGAG  1050
      ||  |||||| ||||||| |||| ||||  ||||||||||||||||||||
seq2  GAAGGGACACCAAATGTATTTAC-GTTG--TGTGAACTGCCTGATATGAG  1030