BAC Information

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BAC

Clone NameB6Ng01-335G08
Chromosome12 (Build37)
Map Location 50,877,606 - 50,878,299
singlet/doubletsinglet
Overlap geneLOC665071
Upstream geneGA_x5J8B7W54VK-284379-285078, Olfr1399-ps1, EG665036, LOC100039366, Foxg1, ENSMUSG00000045946, LOC100039424
Downstream geneLOC665077, LOC100039455, Prkcm
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335G08.bB6Ng01-335G08.g
ACCGA120638GA120639
length7641,119
definitionB6Ng01-335G08.b B6Ng01-335G08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcaacttttgctttcttccatcaactttcgctttcttccgtcc
caaatcaaagattcggatcttagcatcagggacaccaccgcagaaacgag
gctttgggtatggcttgttcttacaatatcggtaacaccgggcggggcgg
cggcccatgatgacaataggatcgtcggtggcgcgccagaggaaaagagc
aagctttgcaattttatgaggtcccatttgttgattcttgatcttaggaa
ataagccattagtgttcccttcagaaaaatttcccctgtgcccatgtgtt
caaagttttcccccgctttctttattagatttagtgtatctgtttttttg
ttggtttttgttgttgttgttgttagttttttttgtttgtttgttttgtt
ttgtttattgagacagggtttctttgtatagctctggctgtccttgaact
cactctataaaccaggttgaactcaaactcagaaatctgcctgcctctgc
ctcccaagtgctgggattaaaggtgtgcaccaccactgcctggcatagtg
tatctggttttatatggaggttcttgatccatttggatttgggttttgca
gaagaatataagaatgaatcaattagaatcatacatgttgaccaccagtt
taaaacagcaccattttgttgaaaatgctgtctttttcccactggatgat
tttagcttctttgtcaaagatcaagtgaccataggtgtgtgggtttcatt
tctgggtcttcaat

gaattccttaatccactgagtcttgaccttagtacagaaagataagaata
gatcaattcgcatgctcctacatgataaccaccagttgtgccagcaccat
ttgctgaaaatgctgtcttttttccactggatggttttaactcccttatc
aaagatcaagtgaccataggtgtgtgggttcatttctgggtcttcatttt
tattccattggtttacttgtctgtcgctataccagtaccatgcagttatt
tttacagttgctctgtagcacagcttgaggtcaggcatggtgattccacc
agagattcttttatcactgagaatagtttttgctatcctagaatgtttag
ttattccagatgaatttgcaaatttccctttctagtacattgaagaattg
agttagaattttgatggggattacattgaatctgttgattgctttcagca
ggatagccatttttactatattgatcctgccaatccatgagcatgggaga
tctttccatcttttgagatcttctttgatttcttacttcagagacttgaa
gttcttatcatacagatctttcacttccttagagttataccaaggtattt
tctattatttgtgactattgtgaagggttttgtttccctaatttctttct
cagcttgtttatcctgtgtatagagaaaggcccttgacttgtatgaggta
attttatatccaggtactttactgaagctgtttatcaagtttaggagttc
tctgatggaagttttagagtctcttatatatattattatattgtctgcaa
atagtgatattttgacttcttcttttccaatttgtatccccttgacctcc
ttttgttgtgtaattgctctggctaggacttcaagtattatattgaatag
gtagggagaaagtgggcagccttgtctagtccctgattttaatgggattg
cttccagctctcaccatttactttgatgttgcctactggtttgctgtaga
tgcttttattatgtttaggtatgggcttgatcatgatctttccagacttt
tatcatgatgggtattgatttggtcaaatgctttctcagcatctatggaa
tgaatcatgtggggttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_50877606_50878299
seq2: B6Ng01-335G08.b_46_741

seq1  GAATTCATCAACTTTTGCTTTCTTCCATCAACTTTCGCTTTCTTCCGTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAACTTTTGCTTTCTTCCATCAACTTTCGCTTTCTTCCGTCC  50

seq1  CAAATCAAAGATTCGGATCTTAGCATCAGGGACACCACCGCAGAAACGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCAAAGATTCGGATCTTAGCATCAGGGACACCACCGCAGAAACGAG  100

seq1  GCTTTGGGTATGGCTTGTTCTTACAATATCGGTAACACCGGGCGGGGCGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGGGTATGGCTTGTTCTTACAATATCGGTAACACCGGGCGGGGCGG  150

seq1  CGGCCCATGATGACAATAGGATCGTCGGTGGCGCGCCAGAGGAAAAGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCCATGATGACAATAGGATCGTCGGTGGCGCGCCAGAGGAAAAGAGC  200

seq1  AAGCTTTGCAATTTTATGAGGTCCCATTTGTTGATTCTTGATCTTAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTGCAATTTTATGAGGTCCCATTTGTTGATTCTTGATCTTAGGAA  250

seq1  ATAAGCCATTAGTGTTCCCTTCAGAAAAATTTCCCCTGTGCCCATGTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCCATTAGTGTTCCCTTCAGAAAAATTTCCCCTGTGCCCATGTGTT  300

seq1  CAAAGTTTTCCCCCGCTTTCTTTATTAGATTTAGTGTATCTGTTTTTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTTTCCCCCGCTTTCTTTATTAGATTTAGTGTATCTGTTTTTTTG  350

seq1  TTGGTTTTTGTTGTTGTTGTTGTTAGTTTTTTTTGTTTGTTTGTTTTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTTTGTTGTTGTTGTTGTTAGTTTTTTTTGTTTGTTTGTTTTGTT  400

seq1  TTGTTTATTGAGACAGGGTTTCTTTGTATAGCTCTGGCTGTCCTTGAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTATTGAGACAGGGTTTCTTTGTATAGCTCTGGCTGTCCTTGAACT  450

seq1  CACTCTATAAACCAGGTTGAACTCAAACTCAGAAATCTGCCTGCCTCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTATAAACCAGGTTGAACTCAAACTCAGAAATCTGCCTGCCTCTGC  500

seq1  CTCCCAAGTGCTGGGATTAAAGGTGTGCACCACCACTGCCTGGCATAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAAGTGCTGGGATTAAAGGTGTGCACCACCACTGCCTGGCATAGTG  550

seq1  TATCTGGTTTTATATGGAGGTTCTTGATCCATTTGGATTTGGGTTTTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGTTTTATATGGAGGTTCTTGATCCATTTGGATTTGGGTTTTGCA  600

seq1  GAAGAATATAAGAATGAATCAATTAGAATCATACATGTTGACCACCAG-T  649
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GAAGAATATAAGAATGAATCAATTAGAATCATACATGTTGACCACCAGTT  650

seq1  TAAAACAGCACCA-TTTGTTGAAAATGCTGTCTTTTTCCCACTGGA  694
      ||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TAAAACAGCACCATTTTGTTGAAAATGCTGTCTTTTTCCCACTGGA  696


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