BAC Information

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BAC

Clone NameB6Ng01-337D21
Chromosome12 (Build37)
Map Location 79,010,845 - 79,125,869
singlet/doubletdoublet
Overlap genenone
Upstream geneFntb, Max, LOC100041765, LOC100041772, Fut8, LOC230765, LOC666659
Downstream geneEG626215, Gphn, 4921509E07Rik, Mpp5, Atp6v1d, LOC100041878, Eif2s1, Plek2, 6330442E10Rik, Plekhh1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337D21.bB6Ng01-337D21.g
ACCGA121928GA121929
length225985
definitionB6Ng01-337D21.b B6Ng01-337D21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,125,654 - 79,125,869)(79,010,845 - 79,011,824)
sequence
gaattcaatttgccttgtattgtcttcatacctaaggtgagatagcagga
aagaggtggaatatattagttgaaaactcagaaaataaatctctgcaggg
aaggcctggtattatcaagtatagagataacatttaaaatgatggaaatg
aatgaggtagcttaaagagaaagtctaaacagtgtgtgagtgtgtgtgtg
tgtgtgcacaccatctgtgtgtgtg
gaattcaataaaaagaaagttattcacaagcataaagtggaggtttgaga
caggatccctgctaacacattgacatgttttctctgcttgaaaaatgtgc
ctgaccaaatctcagtacatttccactcagcccttagcttccttcctact
gctgtgacaaaatgcccaagaaagaggaattaaagaagcaaaggcctgtt
ttggcaagtggtctcattgatctggacctggggcaaagcagaaatcacag
tatcaggcatatgtggtatgggaagatgtctacttcatggcagccaggag
gcaaagacacagagtaaggaaccagggacagggtatatatactataaggg
catgccctggtgacatacttcttcaaatacgtaccacccacctgaatagt
tctcactgcctcccaataatccattcaactttaacccatcaatggataaa
tccattgattacatccaaaccttgtgatcaaactgcttcccaaaagccct
agctatgaaaactggggaccaccttcaacacactagagttggggtaggga
gtgggaatagacatttcagacccaaaccacacatcagccaggattctagg
aaagagagttggaaagtactcacttagaagttataaagcactgtggagga
aaagccatttatctctgtccttcatagttcttagctctgatggactgtgg
taacgagagacagcataacaagaaaaacaatagaatttattaatatccat
attccatgtactcgtgaaagattcccaaagaatgggtacttatcagagaa
aggtgatttacaattgttttcttgagaagtgagagcacaaagggaaaggg
actttgattctcagcgggcagcacactgtgagcatgagtttaacaaagag
caaattcttaggctgatatgggcataatttggaagtgacaaagtttggtc
tttctacattagcaatgacaaagctaggctatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_79125654_79125869
seq2: B6Ng01-337D21.b_42_266 (reverse)

seq1  CACACACACA---------CACACACACACACACACTCACACACTGTTTA  41
      ||||||||||         |||||||||||||||||||||||||||||||
seq2  CACACACACAGATGGTGTGCACACACACACACACACTCACACACTGTTTA  50

seq1  GACTTTCTCTTTAAGCTACCTCATTCATTTCCATCATTTTAAATGTTATC  91
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTCTCTTTAAGCTACCTCATTCATTTCCATCATTTTAAATGTTATC  100

seq1  TCTATACTTGATAATACCAGGCCTTCCCTGCAGAGATTTATTTTCTGAGT  141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATACTTGATAATACCAGGCCTTCCCTGCAGAGATTTATTTTCTGAGT  150

seq1  TTTCAACTAATATATTCCACCTCTTTCCTGCTATCTCACCTTAGGTATGA  191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAACTAATATATTCCACCTCTTTCCTGCTATCTCACCTTAGGTATGA  200

seq1  AGACAATACAAGGCAAATTGAATTC  216
      |||||||||||||||||||||||||
seq2  AGACAATACAAGGCAAATTGAATTC  225

seq1: chr12_79010845_79011824
seq2: B6Ng01-337D21.g_66_1050

seq1  GAATTCAATAAAAAGAAAGTTATTCACAAGCATAAAGTGGAGGTTTGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAAAAAGAAAGTTATTCACAAGCATAAAGTGGAGGTTTGAGA  50

seq1  CAGGATCCCTGCTAACACATTGACATGTTTTCTCTGCTTGAAAAATGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATCCCTGCTAACACATTGACATGTTTTCTCTGCTTGAAAAATGTGC  100

seq1  CTGACCAAATCTCAGTACATTTCCACTCAGCCCTTAGCTTCCTTCCTACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCAAATCTCAGTACATTTCCACTCAGCCCTTAGCTTCCTTCCTACT  150

seq1  GCTGTGACAAAATGCCCAAGAAAGAGGAATTAAAGAAGCAAAGGCCTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGACAAAATGCCCAAGAAAGAGGAATTAAAGAAGCAAAGGCCTGTT  200

seq1  TTGGCAAGTGGTCTCATTGATCTGGACCTGGGGCAAAGCAGAAATCACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAAGTGGTCTCATTGATCTGGACCTGGGGCAAAGCAGAAATCACAG  250

seq1  TATCAGGCATATGTGGTATGGGAAGATGTCTACTTCATGGCAGCCAGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGGCATATGTGGTATGGGAAGATGTCTACTTCATGGCAGCCAGGAG  300

seq1  GCAAAGACACAGAGTAAGGAACCAGGGACAGGGTATATATACTATAAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGACACAGAGTAAGGAACCAGGGACAGGGTATATATACTATAAGGG  350

seq1  CATGCCCTGGTGACATACTTCTTCAAATACGTACCACCCACCTGAATAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCCTGGTGACATACTTCTTCAAATACGTACCACCCACCTGAATAGT  400

seq1  TCTCACTGCCTCCCAATAATCCATTCAACTTTAACCCATCAATGGATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTGCCTCCCAATAATCCATTCAACTTTAACCCATCAATGGATAAA  450

seq1  TCCATTGATTACATCCAAACCTTGTGATCAAACTGCTTCCCAAAAGCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGATTACATCCAAACCTTGTGATCAAACTGCTTCCCAAAAGCCCT  500

seq1  AGCTATGAAAACTGGGGACCACCTTCAACACACTAGAGTTGGGGTAGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATGAAAACTGGGGACCACCTTCAACACACTAGAGTTGGGGTAGGGA  550

seq1  GTGGGAATAGACATTTCAGACCCAAACCACACATCAGCCAGGATTCTAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAATAGACATTTCAGACCCAAACCACACATCAGCCAGGATTCTAGG  600

seq1  AAAGAGAGTTGGAAAGTACTCACTTAGAAGTTATAAAGCACTGTGGAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAGTTGGAAAGTACTCACTTAGAAGTTATAAAGCACTGTGGAGGA  650

seq1  AAAGCCATTTATCTCTGTCCTTCATAGTTCTTAGCTCTGATGGACTGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCATTTATCTCTGTCCTTCATAGTTCTTAGCTCTGATGGACTGTGG  700

seq1  TAACGAGAGACAGCATAACAAGAAAAACAAATAGAATTTATTAATATCCA  750
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TAACGAGAGACAGCATAACAAGAAAAAC-AATAGAATTTATTAATATCCA  749

seq1  TATTCCATGTACTCGTGAAAGATTCCCAAAGAATGGGTACTTATCAGAG-  799
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TATTCCATGTACTCGTGAAAGATTCCCAAAGAATGGGTACTTATCAGAGA  799

seq1  AAGGTGATTTACAATTGTTTCCTTGAGAAGTGAGAGCACAAAGGG-AAGG  848
      |||||||||||||||||||| |||||||||||||||||||||||| ||||
seq2  AAGGTGATTTACAATTGTTTTCTTGAGAAGTGAGAGCACAAAGGGAAAGG  849

seq1  GACTTTGATTCTCAGCGGGCAGCACACTGTGAGCATGAG-TTAACAAAGA  897
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GACTTTGATTCTCAGCGGGCAGCACACTGTGAGCATGAGTTTAACAAAGA  899

seq1  GCAAATCCTTAGGCTGATAT-GGCAT-ATTTGG-AGTGACAAAAGTTTGG  944
      |||||| ||||||||||||| ||||| |||||| |||||| |||||||||
seq2  GCAAATTCTTAGGCTGATATGGGCATAATTTGGAAGTGAC-AAAGTTTGG  948

seq1  TC-TTCTACAGTAGCAATGACAAAGGCAGGCTATGTG  980
      || ||||||| ||||||||||||||  ||||||||||
seq2  TCTTTCTACATTAGCAATGACAAAGCTAGGCTATGTG  985