BAC Information

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BAC

Clone NameB6Ng01-337G19
Chromosome12 (Build37)
Map Location 61,299,974 - 61,392,739
singlet/doubletdoublet
Overlap genenone
Upstream geneFbxo33, LOC665628, LOC238199, LOC665639, LOC665644, EG622488
Downstream geneLOC665665, Ppia-ps12_475.1, LOC100040300
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337G19.bB6Ng01-337G19.g
ACCGA122058GA122059
length1,1081,049
definitionB6Ng01-337G19.b B6Ng01-337G19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,391,625 - 61,392,739)(61,299,974 - 61,301,034)
sequence
gaattcatgtctttgtagccaacccaagagctctgtttctaatatttttt
aatttgtagtagttgtagcatttattgaatagatcatatgatttttgttt
gtaaaatgactccagctagctaatcatagtgattttcatcttggacaaag
gataagtttatactgctaccttagaggacattaccatctcacaaattacc
ttgggtcttaattatgtgtgaaagtcagaggataaactacttccttctag
tttcccacatggaacctgaaaccacttacagtctgtaacactgagaccta
acaggaactgtagcagagttacttcccctatgtctaccttcccactcttt
ccttatgttcttcgttagtgatgaactgcactaaacacatggtctcattt
tcactaggcccatggtctcctttccgttccacactggtgtcagtatagaa
aaaacagagagttcatgtgctttgacaaggcttgtactgtcaaatattta
ctagagtccagaaagataacagtctatgttgacactacaaaaataatgag
taggaggcagaatatgaccagaaaacagataatcatccatatctttgctc
actgtctggccaaggcttgcatgtatactcaatatcaactcggcagcata
acagcagtgaagcaaatcactgggagccacactaatgatggatgatgcag
aatcatgactaatggtggaagctacactacataaacgagaaagaactgca
gaagcaagatgatctatgttgtttaagctaaaggtgtccccaagagccac
agtgcaacagaaaaaaatagccctgctatttttggtggaagaaatgaaat
tagtcataaatgacagattagacaataaaggactaaaaatgttagcttct
gcacttgaagagatgtgatggtgcctggacattacaagtactctaccaag
agacatgattacatactttcatgtcctcattattacagcaattcatctaa
ctacaggttttattacattgagtattcatatagaaagaacatttgggtca
agatcttttctctgggtcctgcacataaagtccagaatagatgcagctct
ctttggat

gaattccatggctctttaaaactgatatgttgaaatctaattgtgaggag
tattggtattaaaggactgagtcataagaggttattaggctatagaacct
actctcatcaataggaccagaaactgtatttttgataaacagagacacac
agaaatgtcttcattgaggaataggccttcataaacacctaatctgacta
tgaattgatcttgaactttctggtgccttgaactgtgataaatgaatttg
ttgcttataatctacccagtttaaggtgtcttgatatataacaagacaaa
cagagtacgcctgggctgattcttgtgtgcagtgtaagacatcaggaaat
cttattgttacatgcagattcaaaggcaaagccacagcaacaaaactatt
caaatgagtatcaggagcccccaagactgtgtagaatgctatcaggaaca
aatggaggaaagtccagagcctgatcatgtccttcctcagtcaaaatatt
ctacttcattaccccaagaattgtttctcaggcactgagagatggtcata
gaacctcaggttaccacaaagcagcagaaaccaatgcactctcttaatgc
ttcaacaaggaatcctgcatattttctatacacagagaaaagtcatatgc
cctcctgaatgttattcaacgacaataatatgaaatggagaaaagtccat
tttagcttaagaaatatctattggtttatttttcattcagttctggagat
tgaacagagggcatcacccatgccagaaaatcttcctgccattaacatat
atcccaagcctctctgggctgtttactttgaggtcttactaatttgtcct
ggttggccttcaactcactctgaagtccaggcagaccggcagacctagaa
ctttctatcatcctttgccttggacacagacctacacaccagacggtttt
ggtctacgtggtgtgatatatatatatatatatatatatatatacttttt
actttcttttatagatatttcttattacattccaaagatatcccgtttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_61391625_61392739
seq2: B6Ng01-337G19.b_44_1151 (reverse)

seq1  ATCCAAAAGAGAGCCTGCATCTA-TCTTGACTTTTAATGTGCAGGGACCA  49
      |||| |||||||| ||||||||| ||| ||||||  |||||||||  |||
seq2  ATCC-AAAGAGAG-CTGCATCTATTCTGGACTTT--ATGTGCAGGACCCA  46

seq1  GAGAAAGATTCTTTGGCCAAATG-TCTTTCTATATGAATAACTCAAATGT  98
      ||||||   ||||   ||||||| ||||||||||||||| |||| |||||
seq2  GAGAAAAGATCTTGACCCAAATGTTCTTTCTATATGAAT-ACTC-AATGT  94

seq1  -ATAAAACCTGTAGTTAGATTGAATTGCTTGTAATAATGAGGACATGAAA  147
       |||||||||||||||||| |||||||| |||||||||||||||||||||
seq2  AATAAAACCTGTAGTTAGA-TGAATTGC-TGTAATAATGAGGACATGAAA  142

seq1  GTATGTAATCATGTCTCTTTGGTAGAGTACTTTGTAATGTCCAGGCACCA  197
      ||||||||||||||||| |||||||||||| |||||||||||||||||||
seq2  GTATGTAATCATGTCTC-TTGGTAGAGTAC-TTGTAATGTCCAGGCACCA  190

seq1  TCACATCTCTTCAAGTGCAGAAGCTAACATTTTTAGTCCTTTATTGTCTA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCTCTTCAAGTGCAGAAGCTAACATTTTTAGTCCTTTATTGTCTA  240

seq1  ATCTGTCATTTATGACTAATTTCATTTCTTCCACCAAAAATAGCAGGGCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTCATTTATGACTAATTTCATTTCTTCCACCAAAAATAGCAGGGCT  290

seq1  ATTTTTTTCTGTTGCACTGTGGCTCTTGGGGACACCTTTAGCTTAAACAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTCTGTTGCACTGTGGCTCTTGGGGACACCTTTAGCTTAAACAA  340

seq1  CATAGATCATCTTGCTTCTGCAGTTCTTTCTCGTTTATGTAGTGTAGCTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGATCATCTTGCTTCTGCAGTTCTTTCTCGTTTATGTAGTGTAGCTT  390

seq1  CCACCATTAGTCATGATTCTGCATCATCCATCATTAGTGTGGCTCCCAGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCATTAGTCATGATTCTGCATCATCCATCATTAGTGTGGCTCCCAGT  440

seq1  GATTTGCTTCACTGCTGTTATGCTGCCGAGTTGATATTGAGTATACATGC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGCTTCACTGCTGTTATGCTGCCGAGTTGATATTGAGTATACATGC  490

seq1  AAGCCTTGGCCAGACAGTGAGCAAAGATATGGATGATTATCTGTTTTCTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTTGGCCAGACAGTGAGCAAAGATATGGATGATTATCTGTTTTCTG  540

seq1  GTCATATTCTGCCTCCTACTCATTATTTTTGTAGTGTCAACATAGACTGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATATTCTGCCTCCTACTCATTATTTTTGTAGTGTCAACATAGACTGT  590

seq1  TATCTTTCTGGACTCTAGTAAATATTTGACAGTACAAGCCTTGTCAAAGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTCTGGACTCTAGTAAATATTTGACAGTACAAGCCTTGTCAAAGC  640

seq1  ACATGAACTCTCTGTTTTTTCTATACTGACACCAGTGTGGAACGGAAAGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAACTCTCTGTTTTTTCTATACTGACACCAGTGTGGAACGGAAAGG  690

seq1  AGACCATGGGCCTAGTGAAAATGAGACCATGTGTTTAGTGCAGTTCATCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCATGGGCCTAGTGAAAATGAGACCATGTGTTTAGTGCAGTTCATCA  740

seq1  CTAACGAAGAACATAAGGAAAGAGTGGGAAGGTAGACATAGGGGAAGTAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACGAAGAACATAAGGAAAGAGTGGGAAGGTAGACATAGGGGAAGTAA  790

seq1  CTCTGCTACAGTTCCTGTTAGGTCTCAGTGTTACAGACTGTAAGTGGTTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTACAGTTCCTGTTAGGTCTCAGTGTTACAGACTGTAAGTGGTTT  840

seq1  CAGGTTCCATGTGGGAAACTAGAAGGAAGTAGTTTATCCTCTGACTTTCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTCCATGTGGGAAACTAGAAGGAAGTAGTTTATCCTCTGACTTTCA  890

seq1  CACATAATTAAGACCCAAGGTAATTTGTGAGATGGTAATGTCCTCTAAGG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAATTAAGACCCAAGGTAATTTGTGAGATGGTAATGTCCTCTAAGG  940

seq1  TAGCAGTATAAACTTATCCTTTGTCCAAGATGAAAATCACTATGATTAGC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGTATAAACTTATCCTTTGTCCAAGATGAAAATCACTATGATTAGC  990

seq1  TAGCTGGAGTCATTTTACAAACAAAAATCATATGATCTATTCAATAAATG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGGAGTCATTTTACAAACAAAAATCATATGATCTATTCAATAAATG  1040

seq1  CTACAACTACTACAAATTAAAAAATATTAGAAACAGAGCTCTTGGGTTGG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAACTACTACAAATTAAAAAATATTAGAAACAGAGCTCTTGGGTTGG  1090

seq1  CTACAAAGACATGAATTC  1115
      ||||||||||||||||||
seq2  CTACAAAGACATGAATTC  1108


seq1: chr12_61299974_61301034
seq2: B6Ng01-337G19.g_62_1110

seq1  GAATTCCATGGCTCTTTAAAACTGATATGTTGAAATCTAATTGTGAGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGGCTCTTTAAAACTGATATGTTGAAATCTAATTGTGAGGAG  50

seq1  TATTGGTATTAAAGGACTGAGTCATAAGAGGTTATTAGGCTATAGAACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGTATTAAAGGACTGAGTCATAAGAGGTTATTAGGCTATAGAACCT  100

seq1  ACTCTCATCAATAGGACCAGAAACTGTATTTTTGATAAACAGAGACACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCATCAATAGGACCAGAAACTGTATTTTTGATAAACAGAGACACAC  150

seq1  AGAAATGTCTTCATTGAGGAATAGGCCTTCATAAACACCTAATCTGACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGTCTTCATTGAGGAATAGGCCTTCATAAACACCTAATCTGACTA  200

seq1  TGAATTGATCTTGAACTTTCTGGTGCCTTGAACTGTGATAAATGAATTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGATCTTGAACTTTCTGGTGCCTTGAACTGTGATAAATGAATTTG  250

seq1  TTGCTTATAATCTACCCAGTTTAAGGTGTCTTGATATATAACAAGACAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTATAATCTACCCAGTTTAAGGTGTCTTGATATATAACAAGACAAA  300

seq1  CAGAGTACGCCTGGGCTGATTCTTGTGTGCAGTGTAAGACATCAGGAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTACGCCTGGGCTGATTCTTGTGTGCAGTGTAAGACATCAGGAAAT  350

seq1  CTTATTGTTACATGCAGATTCAAAGGCAAAGCCACAGCAACAAAACTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTGTTACATGCAGATTCAAAGGCAAAGCCACAGCAACAAAACTATT  400

seq1  CAAATGAGTATCAGGAGCCCCCAAGACTGTGTAGAATGCTATCAGGAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGAGTATCAGGAGCCCCCAAGACTGTGTAGAATGCTATCAGGAACA  450

seq1  AATGGAGGAAAGTCCAGAGCCTGATCATGTCCTTCCTCAGTCAAAATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGGAAAGTCCAGAGCCTGATCATGTCCTTCCTCAGTCAAAATATT  500

seq1  CTACTTCATTACCCCAAGAATTGTTTCTCAGGCACTGAGAGATGGTCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTCATTACCCCAAGAATTGTTTCTCAGGCACTGAGAGATGGTCATA  550

seq1  GAACCTCAGGTTACCACAAAGCAGCAGAAACCAATGCACTCTCTTAATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTCAGGTTACCACAAAGCAGCAGAAACCAATGCACTCTCTTAATGC  600

seq1  TTCAACAAGGAATCCTGCATATTTTCTATACACAGAGAAAAGTCATATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACAAGGAATCCTGCATATTTTCTATACACAGAGAAAAGTCATATGC  650

seq1  CCTCCTGAAATGTTATTCAACGACAATAATATGAAATGGAGAAAAGTCCA  700
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTG-AATGTTATTCAACGACAATAATATGAAATGGAGAAAAGTCCA  699

seq1  TTTTAGCTTAAGAAATATCTATTGGTTTATTTTTCATTCAGTTCTGGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGCTTAAGAAATATCTATTGGTTTATTTTTCATTCAGTTCTGGAGA  749

seq1  TTGAACAGAGGGCATCACCCATGCCAGAAAATCTTCCTGCCATTAACATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACAGAGGGCATCACCCATGCCAGAAAATCTTCCTGCCATTAACATA  799

seq1  TATCCCAAGCCTCTCTGGGCTGTTTACTTTGAGGTCTTACTAATTTGTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCAAGCCTCTCTGGGCTGTTTACTTTGAGGTCTTACTAATTTGTCC  849

seq1  TGGTTGGCCTTCAACTCACTCTGAAGTCCAGGCAGACCGGCAGACCTAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGGCCTTCAACTCACTCTGAAGTCCAGGCAGACCGGCAGACCTAGA  899

seq1  ACTTTCTATCATCC-TTGCCTTGGACACAGACCTACACCACCAGAACCGG  949
      |||||||||||||| |||||||||||||||||||||| |||||||  |||
seq2  ACTTTCTATCATCCTTTGCCTTGGACACAGACCTACA-CACCAGA--CGG  946

seq1  TTTTTGTCCTACGTGTTGTTGAATATATATATATATATATATATATATAT  999
      |||| || ||||||| |||   ||||||||||||||||||||||||||||
seq2  TTTTGGT-CTACGTGGTGT--GATATATATATATATATATATATATATAT  993

seq1  ACTTTTTACTTTCTTTTTATTAGATATTTTCTTTATTTACATTTCAAAAG  1049
      |||||||||||||||||   |||||| ||||||   ||||| ||| ||||
seq2  ACTTTTTACTTTCTTTT--ATAGATA-TTTCTT--ATTACA-TTCCAAAG  1037

seq1  ATATCCCCTTTC  1061
      ||||||| ||||
seq2  ATATCCCGTTTC  1049


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