BAC Information

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BAC

Clone NameB6Ng01-337H24
Chromosome12 (Build37)
Map Location 90,050,655 - 90,163,296
singlet/doubletdoublet
Overlap geneEG666915
Upstream geneBB287469, LOC100038964, LOC673658, LOC100038992, LOC100038982, LOC674027, LOC100039042, LOC100039052, LOC100039076, LOC100039087, LOC100039100, LOC100039191, LOC100039203, LOC627873, LOC100039162, LOC627881, LOC100039129, LOC636517, LOC544884, LOC100039226, LOC432715, EG667350, LOC546543, EG667388, LOC627971, LOC667395, LOC100039315, EG638008, EG666862, EG435337, LOC100039154, LOC633093, LOC667440, LOC100039383, EG266459, LOC667475, LOC620915, LOC435314, Adck1, LOC100039261
Downstream geneNrxn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337H24.bB6Ng01-337H24.g
ACCGA122107GA122108
length1,154316
definitionB6Ng01-337H24.b B6Ng01-337H24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,162,137 - 90,163,296)(90,050,655 - 90,050,970)
sequence
gaattctactagagaactatttttagcttctcatgttgacatacaattca
aactgtacaatatatactttaagtttaatttaatatcattttctgtttga
gaaagaatctcacactatgtagcccatgataggtttgaacttaagatccc
accgcctcagctttcttggtgggattacagacatctataaccaacacctg
gcttcaactttaagtgtgtgttctcactgtatagccttgcctgcctggaa
ttcactacacagaccaggctggcctggaactcagaccaatcttcctgctt
ctttctcatgagtgctaagattaccaatcctgattaaccattttgaagaa
agtcacaaaagtttaataacacacacaatttctaccaaacaaaatttata
tacataaaactaatgtttctaaaggactatgacaaataatgttttttaga
ttatcagtctccctcagattcaagctgaaagcacattaaacactttttgg
tttctttcttttttttttttttcttcccatagtgacaatatagtaaacat
gggtgttgacctctcttcccttccttatcaattccatttcaccggctatg
catggtaccaataatcctactcctaccacgcctatgcatccccctactgt
ctcttccccttctcacttcacacacccaacgatcttctattggcttccta
tcttcatactgggagaagagatacattcatagctgttctgtcaaaagatc
caagtagccatgtgagacaagtggtctctccaagacgctctaatgtatgg
gtaacatggaaaggacacataactacaaggggatactccagttttcagat
ctctagtgactcttggcatatttaaaactcatctgtgtctcatgaagcta
ctccatacaggtgagttattatctcgtcatcttcaaaaagaggactctat
cgagcaagagatagtttttgtgggcagctgctataatgctagggcttgct
cttgtaggaactgccttgaggtggctgcctgatgttgccgactcttgaga
gttgccatagcatcatctctactctctactcctgcctctcaatctatgaa
cagctaaccttcctctctgatcttcatctgaaagattcgccttctatgaa
aaga
acttgtgtttgctttatctctacccaggggtggggtgcttgaagaggaag
caaaatgttttattaaggaagtaaaggctgagcctgggctgccggctcgc
tggctcacttccctcctcccatgtctgactctctggggctgagagtgggg
gctgtgcccatgttgcaaatgcttgctctgcagcacagttttccaggaat
ttcaggacacaggaattttcacccagctgtgttgcgtgttgctgttcagc
agtctgaagttgcttatccagcgtaagtcagaatggggagcctagggagg
aggtggggcggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_90162137_90163296
seq2: B6Ng01-337H24.b_49_1202 (reverse)

seq1  TCTTTTCATAGGGGAGGTGGGAATCTTTTCAAGATGAAAGATCAGAGAGG  50
      |||||||||||  |    | ||||||||   ||||| |||||||||||||
seq2  TCTTTTCATAGAAG----GCGAATCTTT--CAGATG-AAGATCAGAGAGG  43

seq1  AAGG-TAGCTGTCAATAGATTGAGA-GCAGGAGTAGAGAGGTAGAGATGA  98
      |||| |||||||  ||||||||||| ||||||||||||| ||||||||||
seq2  AAGGTTAGCTGTTCATAGATTGAGAGGCAGGAGTAGAGA-GTAGAGATGA  92

seq1  TGCTATGGCAACTCTCCAGGAGTCGGGCAACATCAGGCAGCCACCTCAAA  148
      ||||||||||||||| || ||||| |||||||||||||||||||||||| 
seq2  TGCTATGGCAACTCT-CAAGAGTC-GGCAACATCAGGCAGCCACCTCAAG  140

seq1  GCAGTTCCTACAAGAGCAAGCCCTAGCATTATAGCAGCTGCCCAC-AAAA  197
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCAGTTCCTACAAGAGCAAGCCCTAGCATTATAGCAGCTGCCCACAAAAA  190

seq1  CTATCTCTTGCTCGATAGAGTCCTCTTTTTG-AGATGACGAGATAATAAC  246
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTATCTCTTGCTCGATAGAGTCCTCTTTTTGAAGATGACGAGATAATAAC  240

seq1  TCACCTGTATGGAGTAGCTTCATGAGACACAGATGAGTTTTAAATATGCC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGTATGGAGTAGCTTCATGAGACACAGATGAGTTTTAAATATGCC  290

seq1  AAGAGTCACTAGAGATCTGAAAACTGGAGTATCCCCTTGTAGTTATGTGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTCACTAGAGATCTGAAAACTGGAGTATCCCCTTGTAGTTATGTGT  340

seq1  CCTTTCCATGTTACCCATACATTAGAGCGTCTTGGAGAGACCACTTGTCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCATGTTACCCATACATTAGAGCGTCTTGGAGAGACCACTTGTCT  390

seq1  CACATGGCTACTTGGATCTTTTGACAGAACAGCTATGAATGTATCTCTTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGCTACTTGGATCTTTTGACAGAACAGCTATGAATGTATCTCTTC  440

seq1  TCCCAGTATGAAGATAGGAAGCCAATAGAAGATCGTTGGGTGTGTGAAGT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTATGAAGATAGGAAGCCAATAGAAGATCGTTGGGTGTGTGAAGT  490

seq1  GAGAAGGGGAAGAGACAGTAGGGGGATGCATAGGCGTGGTAGGAGTAGGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGGGAAGAGACAGTAGGGGGATGCATAGGCGTGGTAGGAGTAGGA  540

seq1  TTATTGGTACCATGCATAGCCGGTGAAATGGAATTGATAAGGAAGGGAAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGGTACCATGCATAGCCGGTGAAATGGAATTGATAAGGAAGGGAAG  590

seq1  AGAGGTCAACACCCATGTTTACTATATTGTCACTATGGGAAGAAAAAAAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTCAACACCCATGTTTACTATATTGTCACTATGGGAAGAAAAAAAA  640

seq1  AAAAAAGAAAGAAACCAAAAAGTGTTTAATGTGCTTTCAGCTTGAATCTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAAAGAAACCAAAAAGTGTTTAATGTGCTTTCAGCTTGAATCTG  690

seq1  AGGGAGACTGATAATCTAAAAAACATTATTTGTCATAGTCCTTTAGAAAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGACTGATAATCTAAAAAACATTATTTGTCATAGTCCTTTAGAAAC  740

seq1  ATTAGTTTTATGTATATAAATTTTGTTTGGTAGAAATTGTGTGTGTTATT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTTTTATGTATATAAATTTTGTTTGGTAGAAATTGTGTGTGTTATT  790

seq1  AAACTTTTGTGACTTTCTTCAAAATGGTTAATCAGGATTGGTAATCTTAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTTGTGACTTTCTTCAAAATGGTTAATCAGGATTGGTAATCTTAG  840

seq1  CACTCATGAGAAAGAAGCAGGAAGATTGGTCTGAGTTCCAGGCCAGCCTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCATGAGAAAGAAGCAGGAAGATTGGTCTGAGTTCCAGGCCAGCCTG  890

seq1  GTCTGTGTAGTGAATTCCAGGCAGGCAAGGCTATACAGTGAGAACACACA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGTAGTGAATTCCAGGCAGGCAAGGCTATACAGTGAGAACACACA  940

seq1  CTTAAAGTTGAAGCCAGGTGTTGGTTATAGATGTCTGTAATCCCACCAAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGTTGAAGCCAGGTGTTGGTTATAGATGTCTGTAATCCCACCAAG  990

seq1  AAAGCTGAGGCGGTGGGATCTTAAGTTCAAACCTATCATGGGCTACATAG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGAGGCGGTGGGATCTTAAGTTCAAACCTATCATGGGCTACATAG  1040

seq1  TGTGAGATTCTTTCTCAAACAGAAAATGATATTAAATTAAACTTAAAGTA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGATTCTTTCTCAAACAGAAAATGATATTAAATTAAACTTAAAGTA  1090

seq1  TATATTGTACAGTTTGAATTGTATGTCAACATGAGAAGCTAAAAATAGTT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGTACAGTTTGAATTGTATGTCAACATGAGAAGCTAAAAATAGTT  1140

seq1  CTCTAGTAGAATTC  1160
      ||||||||||||||
seq2  CTCTAGTAGAATTC  1154

seq1: chr12_90050655_90050970
seq2: B6Ng01-337H24.g_73_388

seq1  ACTTGTGTTTGCTTTATCTCTACCCAGGGGTGGGGTGCTTGAAGAGGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTGTTTGCTTTATCTCTACCCAGGGGTGGGGTGCTTGAAGAGGAAG  50

seq1  CAAAATGTTTTATTAAGGAAGTAAAGGCTGAGCCTGGGCTGCCGGCTCGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGTTTTATTAAGGAAGTAAAGGCTGAGCCTGGGCTGCCGGCTCGC  100

seq1  TGGCTCACTTCCCTCCTCCCATGTCTGACTCTCTGGGGCTGAGAGTGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCACTTCCCTCCTCCCATGTCTGACTCTCTGGGGCTGAGAGTGGGG  150

seq1  GCTGTGCCCATGTTGCAAATGCTTGCTCTGCAGCACAGTTTTCCAGGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGCCCATGTTGCAAATGCTTGCTCTGCAGCACAGTTTTCCAGGAAT  200

seq1  TTCAGGACACAGGAATTTTCACCCAGCTGTGTTGCGTGTTGCTGTTCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGACACAGGAATTTTCACCCAGCTGTGTTGCGTGTTGCTGTTCAGC  250

seq1  AGTCTGAAGTTGCTTATCCAGCGTAAGTCAGAATGGGGAGCCTAGGGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGAAGTTGCTTATCCAGCGTAAGTCAGAATGGGGAGCCTAGGGAGG  300

seq1  AGGTGGGGCGGGGGGG  316
      ||||||||||||||||
seq2  AGGTGGGGCGGGGGGG  316