BAC Information

Click to search

BAC

Clone NameB6Ng01-337L08
Chromosome12 (Build37)
Map Location 79,005,510 - 79,006,566
singlet/doubletsinglet
Overlap genenone
Upstream geneFntb, Max, LOC100041765, LOC100041772, Fut8, LOC230765, LOC666659
Downstream geneEG626215, Gphn, 4921509E07Rik, Mpp5, Atp6v1d, LOC100041878, Eif2s1, Plek2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337L08.bB6Ng01-337L08.g
ACCGA122248GA122249
length1,2061,071
definitionB6Ng01-337L08.b B6Ng01-337L08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggatttggttagcgagaattttattaagaatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactccctcgtttggttaattctttg
aatagttcttcttgtttccacttggttgatttcacccctgagtttgatta
tttcctgccgtctactcctcttgggtgaatttgcttcccttttttttcta
agagcttttagatgtgttgtcaagctgctagtatgtgctctctcccgttt
ttttcttgaaggcactcattagcttatgagttttcccttcttaggaaaat
gccttttcaattgtgtccaaaaggtttggggtacggttgttggccttcaa
ttgttcattaactctaaaaagtctttaattttctttctttattcttcctg
gaaccaaggtaatcattggagaagaaagtgtggttacagtttcatgtgat
ggtggcttctggttaataattttggttgaatgagaaagaatcgtacgacg
cctcat
gaattcctcgggcatgagttgatttcaggctcacaggtctatatcagttg
tctgtgtcccagtttaactcattagatggtttaacttgttagaggtaagg
tagcattgacaaaattagttagatttaaaaacgagcacttaataggatta
cttgcttcctttattttatttttaataaaggcattacatgaattagattt
tttatttatctagttatatttttttgaatttacatcatttttatgtctcc
ttcccccttcaactcctcttgggttccacatgtctaaggctgacacttgg
tgaggtgtttgtgagcatcaagtctgccatatttccaggatctgaatctt
cttaaattttctgtatttccatattttatcctaaaaacttgctttatttt
tatactagctttaaactggtattttccccccaaatagatatagggctcat
tttgaatggcatatgagcaatgatcatagtaactaagctatatgtttatc
tttctttaaaaattaatttacatgtatgaaaatgccataattaaatccat
gtgcaacttatgcaagcacaaggacctgagctcagatctcagcagcagcc
atataagaggccaggtgcatttgtgcatgtatgcaatccagtcaactcct
cagcaacctgtgtgttgcaaagcgaggacatctagtactcgcctctgttt
gaactgaggagtgaaatgtgactcacagaaatctggggactcagtgtgat
cactgcctagtcaaaccttcacgacttagacgctgatgatttccagagct
ggagcatcttcagtgtaggagatggatgtcctcctagtgtgaactatgga
aacataacatgaggttttcccatcctcttacgatgtttttaatatgcgcg
aatactgaatgcatcaaggaaggaacccttcctgattttcagaaaagatc
tgaacattggtggttaagataggctgaggcgaggtctgaggacaaagtag
cttttgtcaagttacatctaaggattggggcttttaccaactaaaagatg
tggcttcaactattacctaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_79005510_79006566
seq2: B6Ng01-337L08.g_66_1136 (reverse)

seq1  TCTAGGTAATTGTTG-AGC--CATCTTTTAGTTG--TAAAGCCCAATTCC  45
      |||||||||| |||| |||  |||||||||||||   ||||||| | |||
seq2  TCTAGGTAATAGTTGAAGCCACATCTTTTAGTTGGTAAAAGCCCCAATCC  50

seq1  TTAGAATGTTAACTGGC-AAAGCTACTTTGTCCTCAGCCCTCGCCTCAGC  94
      |||| |||| |  || | ||||||||||||||||||| ||||||||||||
seq2  TTAG-ATGTAACTTGACAAAAGCTACTTTGTCCTCAGACCTCGCCTCAGC  99

seq1  CTATCTT-ACCACC-ATGTTCAGATC-TTTCTG-AAATCAGGAA-GGTTC  139
      ||||||| |||||| ||||||||||| |||||| |||||||||| |||||
seq2  CTATCTTAACCACCAATGTTCAGATCTTTTCTGAAAATCAGGAAGGGTTC  149

seq1  CTTCC-TGATGCA-TCAGTATTCGCGCATATT-AAAACATCGTAAGAGGA  186
      ||||| ||||||| |||||||||||||||||| |||||||||||||||||
seq2  CTTCCTTGATGCATTCAGTATTCGCGCATATTAAAAACATCGTAAGAGGA  199

seq1  T-GGAAAACCTCATGTTATGTTTCCATAGTTCACACTAGGAGGACATCCA  235
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAAACCTCATGTTATGTTTCCATAGTTCACACTAGGAGGACATCCA  249

seq1  TCTCCTACACTGAAGATGCTCCAGCTCTGGAAATCATCAGCGTCTAAGTC  285
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTACACTGAAGATGCTCCAGCTCTGGAAATCATCAGCGTCTAAGTC  299

seq1  GTGAAGGTTTGACTAGGCAGTGATCACACTGAGTCCCCAGATTTCTGTGA  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGGTTTGACTAGGCAGTGATCACACTGAGTCCCCAGATTTCTGTGA  349

seq1  GTCACATTTCACTCCTCAGTTCAAACAGAGGCGAGTACTAGATGTCCTCG  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACATTTCACTCCTCAGTTCAAACAGAGGCGAGTACTAGATGTCCTCG  399

seq1  CTTTGCAACACACAGGTTGCTGAGGAGTTGACTGGATTGCATACATGCAC  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCAACACACAGGTTGCTGAGGAGTTGACTGGATTGCATACATGCAC  449

seq1  AAATGCACCTGGCCTCTTATATGGCTGCTGCTGAGATCTGAGCTCAGGTC  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCACCTGGCCTCTTATATGGCTGCTGCTGAGATCTGAGCTCAGGTC  499

seq1  CTTGTGCTTGCATAAGTTGCACATGGATTTAATTATGGCATTTTCATACA  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGCTTGCATAAGTTGCACATGGATTTAATTATGGCATTTTCATACA  549

seq1  TGTAAATTAATTTTTAAAGAAAGATAAACATATAGCTTAGTTACTATGAT  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATTAATTTTTAAAGAAAGATAAACATATAGCTTAGTTACTATGAT  599

seq1  CATTGCTCATATGCCATTCAAAATGAGCCCTATATCTATTTGGGGGGAAA  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTCATATGCCATTCAAAATGAGCCCTATATCTATTTGGGGGGAAA  649

seq1  ATACCAGTTTAAAGCTAGTATAAAAATAAAGCAAGTTTTTAGGATAAAAT  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAGTTTAAAGCTAGTATAAAAATAAAGCAAGTTTTTAGGATAAAAT  699

seq1  ATGGAAATACAGAAAATTTAAGAAGATTCAGATCCTGGAAATATGGCAGA  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAATACAGAAAATTTAAGAAGATTCAGATCCTGGAAATATGGCAGA  749

seq1  CTTGATGCTCACAAACACCTCACCAAGTGTCAGCCTTAGACATGTGGAAC  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATGCTCACAAACACCTCACCAAGTGTCAGCCTTAGACATGTGGAAC  799

seq1  CCAAGAGGAGTTGAAGGGGGAAGGAGACATAAAAATGATGTAAATTCAAA  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGGAGTTGAAGGGGGAAGGAGACATAAAAATGATGTAAATTCAAA  849

seq1  AAAATATAACTAGATAAATAAAAAATCTAATTCATGTAATGCCTTTATTA  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATAACTAGATAAATAAAAAATCTAATTCATGTAATGCCTTTATTA  899

seq1  AAAATAAAATAAAGGAAGCAAGTAATCCTATTAAGTGCTCGTTTTTAAAT  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAATAAAGGAAGCAAGTAATCCTATTAAGTGCTCGTTTTTAAAT  949

seq1  CTAACTAATTTTGTCAATGCTACCTTACCTCTAACAAGTTAAACCATCTA  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTAATTTTGTCAATGCTACCTTACCTCTAACAAGTTAAACCATCTA  999

seq1  ATGAGTTAAACTGGGACACAGACAACTGATATAGACCTGTGAGCCTGAAA  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTTAAACTGGGACACAGACAACTGATATAGACCTGTGAGCCTGAAA  1049

seq1  TCAACTCATGCCCGAGGAATTC  1057
      ||||||||||||||||||||||
seq2  TCAACTCATGCCCGAGGAATTC  1071