BAC Information

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BAC

Clone NameB6Ng01-337P19
Chromosome18 (Build37)12 (Build37)
Map Location 27,804,052 - 27,805,15932,033,469 - 32,033,511
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG665977, EG665646
Downstream geneEG271505, EG625997
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337P19.bB6Ng01-337P19.g
ACCGA122433GA122434
length1,108729
definitionB6Ng01-337P19.b B6Ng01-337P19.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(27,804,052 - 27,805,159)(32,033,469 - 32,033,511)
sequence
gaattctcactcctggttggtaatttgagcatggcatttttcagtgttat
aaaccacaacatacacacacatttatagaaccatcaatgaggtatcttag
ttagggttttactgctatgaacagacaccatgaccaaggcaagtcttata
aaaaaacaacatttaattgtggctggcttataagttcaggttcagtccat
tatcatccaggtgggagcatggcagtatccaggcaggcatggcgcaagaa
gagctgagagttctatgtcttcatctaaaggctgctagtgaaagactgac
ttccaggcaactagggtgaggatcttatacccactgtgacacacccattc
caaccatgtcatacctattccaacaaggccacaccttcagatggtgtcac
tccctggtccaaggatatacaaaccatcacagcaggtaattcatatcgtg
tcacaaacatcactgcccttaatgaaaaaaaaaaaaaaaaaaaagaccat
ttagtgacctgggcacagaaggaaaagtcttgccgtggaaaatctcaact
ccctgttcagtctcaaaattaggtgtctagccatatccaaatatgtaaaa
taatgaataaatgaataaataaataaataaaatactactgtcaatatcat
tcaacctgagcaggtaaaccaactctttctaaaaccacagcactagaaga
ttaaggaaagaatagagaaggctcttatgtttacaaattcatttcttttc
ttgtaacatgactgctcataactggttctccagtaatccaagctcttata
cgtggtccctaaggaatctgtctacaagggcatgcagaataataaaagac
agctttcagacaggattctgttgaagattaacccagaaatccctataggt
tccacctctctaccacctcccattaaacctgaaaaactaaaaatgatgta
agttctgacttgttcctctatttccccagattatgggaaataagcctttt
aagtttaccacacttatttaaaatatgccttttatagacagctaccatag
ttacaggacaaatcctggatactggacctattaaatatttttccctaccc
tcaaattt

gaattcttgggattgcttattcatattattctataatctgcaaatcatga
ttctttcctaatttttatcttcttgatctattttagttttcttatttctc
tggctagaatattaagtactatattaaatatatagggagagagtggatag
ccttgtctcatccctgattttagtagaaatgctttaaatttctatccatt
tagtttgatattgctgtatattgctttgactatatttagttatgtttcct
gtagccctgatttctctaatacttttaacatgaagagatgttggatgtta
tcaatggtgtcttcagtgtctaatgagaaaagcatgtgattatttttctt
cccatttgtacagaaatatacattgatgcatatttgtatattaaagcatc
tttgtatccctgggatgaagtctatgtgatattgacggatggtatcttag
atatgttcctggattcaatttgcaagtatttttgcatcaatattcactag
agaaaatggtctgaaattctttttcttcattgagtctttgtgtggtttag
gtatcttggtgactatggcctgatgagtttggcagggttccttgtattac
tttatggaatagttcaaggagtattgctgtagctcttctttgacggtctg
gtagaattctgcattaaaacaatctggatctatctcttttgttttgtttt
gttttgtttttggttttggttttggtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_27804052_27805159
seq2: B6Ng01-337P19.b_50_1157 (reverse)

seq1  AAATTTGA-GGTTGGGGAAAATATTTATTA-GTTCAGTAATTCCAAGATT  48
      |||||||| ||| ||| |||||||||| || || |||||  |||| ||||
seq2  AAATTTGAGGGTAGGGAAAAATATTTAATAGGTCCAGTA--TCCAGGATT  48

seq1  TGTCCTGTAAACTATGGTAAGCTGTCTATAAAAGCATTATTTTAAAATAA  98
      |||||||| ||||||||| |||||||||||||||   |||||| ||||||
seq2  TGTCCTGT-AACTATGGT-AGCTGTCTATAAAAGGCATATTTT-AAATAA  95

seq1  GTTGTGGTAAAACTTAAAA-GCTTATTT-CCATAATCTGGGGAAATAGAG  146
      | |||||| |||||||||| |||||||| |||||||||||||||||||||
seq2  G-TGTGGT-AAACTTAAAAGGCTTATTTCCCATAATCTGGGGAAATAGAG  143

seq1  AACAAAGTCAGAACTTACATCATTTTTAG-TTTTCAGGTTTAATGGGAGG  195
       |  ||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GAACAAGTCAGAACTTACATCATTTTTAGTTTTTCAGGTTTAATGGGAGG  193

seq1  T-GTAGAGAGGTGGAACCTATAGGGATTTCTGGGTTAATCTTCAACAGAA  244
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGAGAGGTGGAACCTATAGGGATTTCTGGGTTAATCTTCAACAGAA  243

seq1  TCCTGTCTGAAAGCTGTCTTTTATTATTCTGCATGCCCTTGTAGACAGAT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCTGAAAGCTGTCTTTTATTATTCTGCATGCCCTTGTAGACAGAT  293

seq1  TCCTTA-GGACCACGTATAAGAGCTTGGATTACTGGAGAACCAGTTATGA  343
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGGGACCACGTATAAGAGCTTGGATTACTGGAGAACCAGTTATGA  343

seq1  GCAGTCATGTTACAAGAAAAGAAATGAATTTGTAAACATAAGAGCCTTCT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCATGTTACAAGAAAAGAAATGAATTTGTAAACATAAGAGCCTTCT  393

seq1  CTATTCTTTCCTTAATCTTCTAGTGCTGTGGTTTTAGAAAGAGTTGGTTT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCTTTCCTTAATCTTCTAGTGCTGTGGTTTTAGAAAGAGTTGGTTT  443

seq1  ACCTGCTCAGGTTGAATGATATTGACAGTAGTATTTTATTTATTTATTTA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCTCAGGTTGAATGATATTGACAGTAGTATTTTATTTATTTATTTA  493

seq1  TTCATTTATTCATTATTTTACATATTTGGATATGGCTAGACACCTAATTT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTATTCATTATTTTACATATTTGGATATGGCTAGACACCTAATTT  543

seq1  TGAGACTGAACAGGGAGTTGAGATTTTCCACGGCAAGACTTTTCCTTCTG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTGAACAGGGAGTTGAGATTTTCCACGGCAAGACTTTTCCTTCTG  593

seq1  TGCCCAGGTCACTAAATGGTCTTTTTTTTTTTTTTTTTTTTCATTAAGGG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAGGTCACTAAATGGTCTTTTTTTTTTTTTTTTTTTTCATTAAGGG  643

seq1  CAGTGATGTTTGTGACACGATATGAATTACCTGCTGTGATGGTTTGTATA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATGTTTGTGACACGATATGAATTACCTGCTGTGATGGTTTGTATA  693

seq1  TCCTTGGACCAGGGAGTGACACCATCTGAAGGTGTGGCCTTGTTGGAATA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGGACCAGGGAGTGACACCATCTGAAGGTGTGGCCTTGTTGGAATA  743

seq1  GGTATGACATGGTTGGAATGGGTGTGTCACAGTGGGTATAAGATCCTCAC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGACATGGTTGGAATGGGTGTGTCACAGTGGGTATAAGATCCTCAC  793

seq1  CCTAGTTGCCTGGAAGTCAGTCTTTCACTAGCAGCCTTTAGATGAAGACA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTTGCCTGGAAGTCAGTCTTTCACTAGCAGCCTTTAGATGAAGACA  843

seq1  TAGAACTCTCAGCTCTTCTTGCGCCATGCCTGCCTGGATACTGCCATGCT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTCTCAGCTCTTCTTGCGCCATGCCTGCCTGGATACTGCCATGCT  893

seq1  CCCACCTGGATGATAATGGACTGAACCTGAACTTATAAGCCAGCCACAAT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTGGATGATAATGGACTGAACCTGAACTTATAAGCCAGCCACAAT  943

seq1  TAAATGTTGTTTTTTTATAAGACTTGCCTTGGTCATGGTGTCTGTTCATA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTTGTTTTTTTATAAGACTTGCCTTGGTCATGGTGTCTGTTCATA  993

seq1  GCAGTAAAACCCTAACTAAGATACCTCATTGATGGTTCTATAAATGTGTG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTAAAACCCTAACTAAGATACCTCATTGATGGTTCTATAAATGTGTG  1043

seq1  TGTATGTTGTGGTTTATAACACTGAAAAATGCCATGCTCAAATTACCAAC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTTGTGGTTTATAACACTGAAAAATGCCATGCTCAAATTACCAAC  1093

seq1  CAGGAGTGAGAATTC  1108
      |||||||||||||||
seq2  CAGGAGTGAGAATTC  1108


seq1: chr12_32033469_32033511
seq2: B6Ng01-337P19.g_755_797

seq1  TTTTGTTGTTTTGTTTTTTGTTTTTGGTTTTGGTTTTGGTTTT  43
      ||||||| | || | ||||||||||||||||||||||||||||
seq2  TTTTGTTTTGTTTTGTTTTGTTTTTGGTTTTGGTTTTGGTTTT  43


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