BAC Information

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BAC

Clone NameB6Ng01-339E09
Chromosome12 (Build37)
Map Location 37,747,014 - 37,747,566
singlet/doubletsinglet
Overlap genenone
Upstream geneTspan13, EG432649, Bzw2, Ankmy2, 1700108M19Rik, Sostdc1, 4930579E17Rik, LOC638858
Downstream geneMeox2, A530016O06Rik, LOC100043139, Dgkb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-339E09.bB6Ng01-339E09.g
ACCGA123312GA123313
length1,173902
definitionB6Ng01-339E09.b B6Ng01-339E09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacctccttagttagagtcacgccaagatattttatattat
ttgtgactattgagaagggtgttgttcctaatttcttcttcagcctgttt
attctttgtatagagaaaggccattgacttgtttgagttatttttatatc
agcctatctcaaccgaagcctgtttatcaggttaaggaagttctcttggt
agatttagggttcacttatatatacatcgatcactgcgaaaggcattttg
cacttccccttttcacacaggtg
gaattcatgtattcatggtgatgttaactggtccaagaatacatggctgg
ctatgatttctttcttccttcctgcctgcctgccttccttccttccttcc
ttccttccttccttacttccttccttccttccttcctcccttcctccctt
cctcccttcctcccttcctcccttttgtttgtttttcaacacagagtttc
tctgtatagccctggctgtcctgcaactcactctgtagagtaggctggcc
tcgaactcagaaatatgcctgtctctgcctcccaagtgctgggattaaaa
ttgtgtgctaccattgccccactgcccagcagctggctatgtctataccc
taatgaagaaaccattacctactattattattctgctaaactcccttaag
tgtttctctttatacccacagattaatgcatctctcaacccacaataaat
atccttacttttgcagctaatgacaattaatacatagattgatgattagt
caacatgaagagagtaagtgtcagtagatggctcaggttctcaaccccca
agacttatgggtcatcttagagtaggaggtattaagaaccacggttgtga
aggattgccatgatgtagggccactgaatacatgaattctaagaggctgt
aactgcatccatgagacctgcacaagatcaagccaccgatgtttcaacat
ggatccagtgatggattacaaagtcttgcctctatatgaggagctattga
ttatcaatggtgctagggtagggagagtcagatttcttgagcttgccaca
cctagtaagctgaacatgctcagtaattctcctacacccatgcatatatg
ggtagcactaagtgagttcaatgttttttttaataatacatgaagttggg
aa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_37747014_37747566
seq2: B6Ng01-339E09.g_67_619

seq1  GAATTCATGTATTCATGGTGATGTTAACTGGTCCAAGAATACATGGCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTATTCATGGTGATGTTAACTGGTCCAAGAATACATGGCTGG  50

seq1  CTATGATTTCTTTCTTCCTTCCTGCCTGCCTGCCTTCCTTCCTTCCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGATTTCTTTCTTCCTTCCTGCCTGCCTGCCTTCCTTCCTTCCTTCC  100

seq1  TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCCTTCCTCCCTT  150
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCTTCCTTACTTCCTTCCTTCCTTCCTTCCTCCCTTCCTCCCTT  150

seq1  CCTCCCTTCCTCCCTTCCTCCCTTTTGTTTGTTTTTCAACACAGAGTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTTCCTCCCTTCCTCCCTTTTGTTTGTTTTTCAACACAGAGTTTC  200

seq1  TCTGTATAGCCCTGGCTGTCCTGCAACTCACTCTGTAGAGTAGGCTGGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATAGCCCTGGCTGTCCTGCAACTCACTCTGTAGAGTAGGCTGGCC  250

seq1  TCGAACTCAGAAATATGCCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAACTCAGAAATATGCCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAA  300

seq1  TTGTGTGCTACCATTGCCCCACTGCCCAGCAGCTGGCTATGTCTATACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGCTACCATTGCCCCACTGCCCAGCAGCTGGCTATGTCTATACCC  350

seq1  TAATGAAGAAACCATTACCTACTATTATTATTCTGCTAAACTCCCTTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAGAAACCATTACCTACTATTATTATTCTGCTAAACTCCCTTAAG  400

seq1  TGTTTCTCTTTATACCCACAGATTAATGCATCTCTCAACCCACAATAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTCTTTATACCCACAGATTAATGCATCTCTCAACCCACAATAAAT  450

seq1  ATCCTTACTTTTGCAGCTAATGACAATTAATACATAGATTGATGATTAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTACTTTTGCAGCTAATGACAATTAATACATAGATTGATGATTAGT  500

seq1  CAACATGAAGAGAGTAAGTGTCAGTAGATGGCTCAGGTTCTCAACCCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATGAAGAGAGTAAGTGTCAGTAGATGGCTCAGGTTCTCAACCCCCA  550

seq1  AGA  553
      |||
seq2  AGA  553