BAC Information

Click to search

BAC

Clone NameB6Ng01-340G05
Chromosome12 (Build37)
Map Location 112,949,859 - 112,950,329
singlet/doubletsinglet
Overlap geneBag5
Upstream geneWdr20a, Rage, 2810455K09Rik, LOC100041649, 2810452K22Rik, 4930573I19Rik, Ankrd9, 6030440G07Rik, Rcor1, 4930595D18Rik, Traf3, Amn, Cdc42bpb, A230065H16Rik, 1200009I06Rik, Tnfaip2, Gm266, Eif5, Mark3, Ckb, 6720458F09Rik
Downstream gene2810002N01Rik, Klc1, Xrcc3, Zfyve21, Ppp1r13b, LOC100041886, 2010107E04Rik, BC048943, Tdrd9, A530050D06Rik, Kif26a, A730018C14Rik, A530016L24Rik, Tmem179, 2610204M08Rik, Adssl1, Siva1, Akt1, EG382639
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-340G05.bB6Ng01-340G05.g
ACCGA124112GA124113
length548816
definitionB6Ng01-340G05.b B6Ng01-340G05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
acacagaatgtcctaagccaccaaaggattctgggaaaggacagagagct
attgcaggggtggggtggggtgggggcggggaacaccaatacaccggtga
gcttgctttgttttgtacctgtccagctgttttcaggagagggagttgac
atgtcacatcttccctttcctcaagcaaccttttacacctttgacgaaac
cttttgtgtattttggtgcatgcccagatgccagagtttggcctccctgc
ccgcccaccatcatttccttggtgtcctttgactttggcttttgaagtgg
ggcttcccatggacctgaaggtcctcgggtaggctaacctgggctggtca
ttgaatcaccagatccatctatcgccgtctccccggcactggcttgcccg
gcttttctgttttatttcatgggcattgtcgcttcgcctgcttggatgtc
tgtgcatctctgtgtgcctggtgcctctgaagacagaaagggaatcagat
gacctgggactggggttacctgtgtggtcatgcactgtcatgtgagtg
gaattctctcgaaaggtttttggatagtgggttggatggtatagatgact
agttggttcgctggttggccagctagttggttcgttggttcattggttca
ttggttggttggttggttggtttaaagagaaaatctggggctgagggtgt
agaacgtttgtttacctagcatatgcaggaaggattggctctagcctcag
catcgcataaactgggtgtgatggtgtatacctgtaatcccagcatccag
aggtagaagcagtaggacgagaagttcaaggtcattcttgcctatatgaa
tttaaggccagtctgagctacagtgagatcctgtctcaaacataaatagt
ctggctgaattaggcagactggccttgaatttgttaactaaagtgatttt
cctgcctccagaatagctgaggcctacaggtgcacaattttctgcctagt
cagaattatctgcctttagtgcttaatatctgtggctgcactccaaagga
gctgtcttcccctacctagacttttccatctgctgagaaccccctacact
tgcacaacatagaatatttctgaaacctctgctcacaaagacccatatga
cctcgaaactctgggttctgcacaagctactacctggatggcatccattc
agttctgattctttgaacagaacattaagaactggtgcatgggggtgtac
accttttatcccagcacctgggaggctgaggccaggtgatctccgagttc
caggccagatgggcctatgttacatagggacaccctgactcggagagaga
gagatagagactgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_112949859_112950329
seq2: B6Ng01-340G05.b_128_597 (reverse)

seq1  CACTCACATGACAGTGCATGACCACACAGGTAACCCCAGTCCCAGGGCAT  50
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CACTCACATGACAGTGCATGACCACACAGGTAACCCCAGTCCCAGGTCAT  50

seq1  CTGATTCCCTTTCTGTCTTCAGAGGCACCAGGCACACAGTGATGCACAGA  100
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTGATTCCCTTTCTGTCTTCAGAGGCACCAGGCACACAGAGATGCACAGA  100

seq1  CATCCATGCAGGCGAAGCGCCAACGCCCATGAAGTAAAACAGAAAAGCCA  150
      |||||| |||||||||||| ||| ||||||||| ||||||||||||||| 
seq2  CATCCAAGCAGGCGAAGCGACAATGCCCATGAAATAAAACAGAAAAGCCG  150

seq1  GGCAAGCCAGTGCCGGGGAGACGGCGATAGATGGATCTCGTGATTCACTG  200
      |||||||||||||||||||||||||||||||||||||| |||||||| ||
seq2  GGCAAGCCAGTGCCGGGGAGACGGCGATAGATGGATCTGGTGATTCAATG  200

seq1  GCCAGCCCAGGTTAGCCTAACCGAGGACCTTCAGGACCATGGGAAGCCCC  250
       |||||||||||||||||| ||||||||||||||| ||||||||||||||
seq2  ACCAGCCCAGGTTAGCCTACCCGAGGACCTTCAGGTCCATGGGAAGCCCC  250

seq1  ACTTCAAAAGCCAAAGTCAAAGGACACCAAGGAAATGATGGTGGGCGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAAAAGCCAAAGTCAAAGGACACCAAGGAAATGATGGTGGGCGGGC  300

seq1  AGGGAGGCCAAACTCTGGCACCTGGGCATGCACCAAAATACACAAAAGGT  350
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGGGAGGCCAAACTCTGGCATCTGGGCATGCACCAAAATACACAAAAGGT  350

seq1  TTCGTCAAAGGTGTAAAAGGTTGCTTGAGGAAAGGGAAGATGTGACATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTCAAAGGTGTAAAAGGTTGCTTGAGGAAAGGGAAGATGTGACATGT  400

seq1  CAACTCCCTCTCCTGAAAACAGCTGGACAGGAACAAAACAAAGCAAGCTC  450
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CAACTCCCTCTCCTGAAAACAGCTGGACAGGTACAAAACAAAGCAAGCTC  450

seq1  ACCGGTGTGCTGGTGTATCCC  471
      ||||||||  |||||| ||||
seq2  ACCGGTGTATTGGTGT-TCCC  470