BAC Information

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BAC

Clone NameB6Ng01-340P18
Chromosome12 (Build37)
Map Location 58,290,167 - 58,291,223
singlet/doubletsinglet
Overlap geneSlc25a21
Upstream geneLOC382601, Mbip, EG621837, E030019B13Rik, Titf1, LOC100039993, Nkx2-9, Pax9
Downstream geneAU021838, LOC100040044, Foxa1, 4921506M07Rik, EG217600, BC042761
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-340P18.bB6Ng01-340P18.g
ACCGA124512GA124513
length2751,033
definitionB6Ng01-340P18.b B6Ng01-340P18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tatcagaccttcaaagaagacccaattccaattctcctcaaatgattcca
caaaatagaaacagaaggaacatttccacaattcgttctatggtgccata
attacacttgtacctaaactacacaaagatccaacaaagaaagagaactt
cagaccaatttcccttatgaatatcgatgcaaaaatactcaataaaattc
tagatctatgccccagtataggggaatgccaggaccaggaatgggagtgg
atgggttggggagcatggggagggg
gaattcagtctattctagtgtgaaattccagtaggagtttcagaatctcg
ttcctttcattcagtcttttttttgtttacactttaaaggcatcactact
taaatcataaagatatctgaaaatgggctggcatgtggctgaaggacaag
cctggtggcctgagttcgatcctttgggctcacaaaatagagaattcccc
actcttgcaagttgtcctctaattgctacctgcatgccatggcacatgac
ttacatgggcctgcatgtacacaatagaaacacacatgcacacatgcaca
atagaaaatgaaatggaataaaaaggttttaggtatttggtaatgatttg
tagcatctttttttttttttttgattttggaatcctgaaatattaaatta
cattgctatgagaagtggcaaagattttagacccagaaatattttttcac
attatttactaagtagttgaaataaaatgttgttcttagtactgttgcag
ttcattcttaaaaattattagaacctgtggcgacttctctctttggaagt
ggagccaagaataaatgaacgttgtacgagtcagcctctgtggtcaagct
ggtggaagggagaacaaaggctgatttagcagcctgattctgaaacattg
gggaaagttgttctatgtcaactgagtaatgcccacatattgacagtagc
aaagcttctaaaatctcattcacaagaataaaataagaaatccttcaagt
gtagttatttagctcctggttttgttctttaatgcatattcttgaagact
agattttcctaaagagagacaaaactactcttaattaacatacacccctt
aaaggtattttataattaatttgagcaatagggttgcttcctcctctgtg
gttaaataaggggaatttttcctcctaatatccagatatgggttcagctc
ccttgatgtgtcacagggctcacctgttcactacactgctatttatatca
acatatagtcctcaatccgattcaaaggtgtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_58290167_58291223
seq2: B6Ng01-340P18.g_67_1099

seq1  GAATTCAGTCTATTCTAGTGTGAAATTCCAGTAGGAGTTTCAGAATCTCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCTATTCTAGTGTGAAATTCCAGTAGGAGTTTCAGAATCTCG  50

seq1  TTCCTTTCATTCAGTCTTTTTTTTGTTTACACTTTAAAGGCATCACTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCATTCAGTCTTTTTTTTGTTTACACTTTAAAGGCATCACTACT  100

seq1  TAAATCATAAAGATATCTGAAAATGGGCTGGCATGTGGCTGAAGGACAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCATAAAGATATCTGAAAATGGGCTGGCATGTGGCTGAAGGACAAG  150

seq1  CCTGGTGGCCTGAGTTCGATCCTTTGGGCTCACAAAATAGAGAATTCCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTGGCCTGAGTTCGATCCTTTGGGCTCACAAAATAGAGAATTCCCC  200

seq1  ACTCTTGCAAGTTGTCCTCTAATTGCTACCTGCATGCCATGGCACATGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGCAAGTTGTCCTCTAATTGCTACCTGCATGCCATGGCACATGAC  250

seq1  TTACATGGGCCTGCATGTACACAATAGAAACACACATGCACACATGCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGGGCCTGCATGTACACAATAGAAACACACATGCACACATGCACA  300

seq1  ATAGAAAATGAAATGGAATAAAAAGGTTTTAGGTATTTGGTAATGATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAATGAAATGGAATAAAAAGGTTTTAGGTATTTGGTAATGATTTG  350

seq1  TAGCATCTTTTTTTTTTTTTTTGATTTTGGAATCCTGAAATATTAAATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATCTTTTTTTTTTTTTTTGATTTTGGAATCCTGAAATATTAAATTA  400

seq1  CATTGCTATGAGAAGTGGCAAAGATTTTAGACCCAGAAATATTTTTTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTATGAGAAGTGGCAAAGATTTTAGACCCAGAAATATTTTTTCAC  450

seq1  ATTATTTACTAAGTAGTTGAAATAAAATGTTGTTCTTAGTACTGTTGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTACTAAGTAGTTGAAATAAAATGTTGTTCTTAGTACTGTTGCAG  500

seq1  TTCATTCTTAAAAATTATTAGAACCTGTGGCGACTTCTCTCTTTGGAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCTTAAAAATTATTAGAACCTGTGGCGACTTCTCTCTTTGGAAGT  550

seq1  GGAGCCAAGAATAAATGAACGTTGTACGAGTCAGCCTCTGTGGTCAAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCAAGAATAAATGAACGTTGTACGAGTCAGCCTCTGTGGTCAAGCT  600

seq1  GGTGGAAGGGAGAACAAAGGCTGATTTAGCAGCCTGATTCTGAAACATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAAGGGAGAACAAAGGCTGATTTAGCAGCCTGATTCTGAAACATTG  650

seq1  GGGAAAGTTGTTCTATGTCAACTGAGTAATGCCCACATATTGACAGTAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGTTGTTCTATGTCAACTGAGTAATGCCCACATATTGACAGTAGC  700

seq1  AAAGCTTCTAAAATCTCATTCACAAGAATAAAATAAGAAATCCTTCAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTCTAAAATCTCATTCACAAGAATAAAATAAGAAATCCTTCAAGT  750

seq1  GTAGTTATTTAGCTCCTGGTTTTGTTCTTTAATGCATATTCTTGAAGACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTATTTAGCTCCTGGTTTTGTTCTTTAATGCATATTCTTGAAGACT  800

seq1  AGATTTTCCTAAAGAGAGACAAAACTACTCTTAATTAACATACACCCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTCCTAAAGAGAGACAAAACTACTCTTAATTAACATACACCCCTT  850

seq1  AAAGGTATTTTATAATTAATTTGAGCAATAGGGTTGCTTCCTCCTCTGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTATTTTATAATTAATTTGAGCAATAGGGTTGCTTCCTCCTCTGTG  900

seq1  GTTAAAATAAGGGGGAATTTTTTCCCTCCCTAATTATCCAGATAATGGGT  950
      ||| |||||| |||||||||||  ||| ||||| ||||||||| ||||||
seq2  GTT-AAATAA-GGGGAATTTTT--CCT-CCTAA-TATCCAGAT-ATGGGT  943

seq1  TCCAGCCTCCCTTTGATGTGTCACAAGGGCTCACCTGTTTCACTACAACC  1000
      | ||| ||||| |||||||||||| |||||||||||| |||||||||  |
seq2  T-CAG-CTCCC-TTGATGTGTCAC-AGGGCTCACCTG-TTCACTACA--C  986

seq1  TGCTATTTATTATCAAACAATTATAGTTCCTCAAATCCCGAATTTCCAAA  1050
      ||||||||| |||| ||||  ||||| |||||||   ||||   | ||||
seq2  TGCTATTTA-TATC-AACA--TATAG-TCCTCAA--TCCGA---TTCAAA  1026

seq1  GGTGTCA  1057
      |||||||
seq2  GGTGTCA  1033