BAC Information

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BAC

Clone NameB6Ng01-341D14
Chromosome12 (Build37)
Map Location 96,472,551 - 96,473,657
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC217786, LOC100039603
Downstream geneLOC667688, Flrt2, 1700019M22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341D14.bB6Ng01-341D14.g
ACCGA124674GA124675
length1,1601,089
definitionB6Ng01-341D14.b B6Ng01-341D14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttttattctagagtttttagatgtgctgctatgttactagtat
gacatttgtctaatttaattaggcaattaaagcaatgaacttgcatcttg
gaactgtctttattgtgtctcctaagattgagtatggtgtttattttctt
tcaattccacaaacttttaaacttctttctgatttcctgtcttgacccat
ttttcactcagaagggagctatatagtttccatgagactgtaatattttt
gttgattctgctgttgttgatatcaagctttattccatagtgggccacat
aggatccagggtgttatttaatacttattgtatcttttaagacttggttt
gtgtttaagtacatggttaattgtgctgaaagttccttgaggcactgaga
agaatgtatattcttttatgtttgagtgaaatgttatgtaaagatcgttt
agatccctatggtttataatattagttacctccagcatttctctgtttag
cttttctttttagaggaactctttattggtaagagtgatgcaataaagca
ataagccttccactatcatgatttgagagtcaacctttatgaagtagggt
gcccttgcatttggtttgtagatgctaaaaactataatgggtggcttctt
gatggttttttcctttgatgagtatgtagtatcctttcctatatctcctt
actcattttggtttgatgtatgttttgtcagatattaacactgttaccat
agtttccctttcagatttatttgcttcggacttttaccctgaaattgttt
gtttccttgatgttaaaaacaatgggtcttgttttcacttacattttgct
agtctgtgtctttttattgggcaatttgataccacagaagagtgagatat
caatgaactgttttcattgattcctgttatcattcttgttgactctgtgt
tatgttgtgccagcagcagtgttgttgttgtgtttgtgtttacccacttt
tgtatactggtcaaggcttagtaatttcttaggattcttgctccggaaaa
cactttacattggaattttcctctaccaccttttgtagaatctggatttg
agatcgatactgacattagttgatctacccgggacagtctatctgttcta
tgtgatagga

gaattcttgccatactgtatacaccagttcaaggcacaacacttattaga
tgttggtttcttcatgagtagagtagaagtaagtcaaattcatagtttct
gaagaatattaaataaaatgtgcatgcaaaaatatcttttctgtacacaa
aacacataggattctatgtaagtatgggagggctctgtctgactatctgt
ctgctatttctgatttccctctctccctccctcggacagaaattttggtc
ttgttcaataaatggtttcaaggattaatcacattttcacacagcatctc
cagtgtctcccactgagaaaaatttgttatggaaacagaactcttgctat
tttcaggagttggtatctgattttattcatttgactgtatgctttgagta
cctataaaaacagtttatggcttcttgctcaatcaatgtaagggaagtga
taaatggcaatttaaagtatggtaagaatgtgaagttctgaggtttccgc
acactctgggcactgacttcctcctaatattagaatgcatataaggatag
ggaggtattgagctgcttgtcatttgaagtggttttctcaagtggtgata
tcagtgatggtgtggcggtttccacagaaatacatccaaagtaaattgag
acactccctttaggtatgacacaaagagtaactaagaaagttcaagacat
tttgattgccaaaagaagtcattgttttccatgaacagtaacacagagcc
ataatgctaagaagaagcaattcccaagtggcttttcaactttgttgact
cagtggagaaaatgacattccagggacccacccttagcctttggggttga
atagtactgggcaggacacaacatcagaagaagaccaaagactgttcatc
ccagccttataatcttactatttgtgtttgaataagtgctggtttccttt
ctctactatgtgtgcttcaattcatgatggttcttttctctctctccagg
actgtcagtgaaaggatgattcattactctttgtgatcagaagaaaagaa
aggtaaagataaatatttacacagaatatgcccaggcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_96472551_96473657
seq2: B6Ng01-341D14.g_64_1152

seq1  GAATTCTTGCCATACTGTATACACCAGTTCAAGGCACAACACTTATTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCCATACTGTATACACCAGTTCAAGGCACAACACTTATTAGA  50

seq1  TGTTGGTTTCTTCATGAGTAGAGTAGAAGTAAGTCAAATTCATAGTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGTTTCTTCATGAGTAGAGTAGAAGTAAGTCAAATTCATAGTTTCT  100

seq1  GAAGAATATTAAATAAAATGTGCATGCAAAAATATCTTTTCTGTACACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATATTAAATAAAATGTGCATGCAAAAATATCTTTTCTGTACACAA  150

seq1  AACACATAGGATTCTATGTAAGTATGGGAGGGCTCTGTCTGACTATCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATAGGATTCTATGTAAGTATGGGAGGGCTCTGTCTGACTATCTGT  200

seq1  CTGCTATTTCTGATTTCCCTCTCTCCCTCCCTCGGACAGAAATTTTGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTATTTCTGATTTCCCTCTCTCCCTCCCTCGGACAGAAATTTTGGTC  250

seq1  TTGTTCAATAAATGGTTTCAAGGATTAATCACATTTTCACACAGCATCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCAATAAATGGTTTCAAGGATTAATCACATTTTCACACAGCATCTC  300

seq1  CAGTGTCTCCCACTGAGAAAAATTTGTTATGGAAACAGAACTCTTGCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCTCCCACTGAGAAAAATTTGTTATGGAAACAGAACTCTTGCTAT  350

seq1  TTTCAGGAGTTGGTATCTGATTTTATTCATTTGACTGTATGCTTTGAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGAGTTGGTATCTGATTTTATTCATTTGACTGTATGCTTTGAGTA  400

seq1  CCTATAAAAACAGTTTATGGCTTCTTGCTCAATCAATGTAAGGGAAGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATAAAAACAGTTTATGGCTTCTTGCTCAATCAATGTAAGGGAAGTGA  450

seq1  TAAATGGCAATTTAAAGTATGGTAAGAATGTGAAGTTCTGAGGTTTCCGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGGCAATTTAAAGTATGGTAAGAATGTGAAGTTCTGAGGTTTCCGC  500

seq1  ACACTCTGGGCACTGACTTCCTCCTAATATTAGAATGCATATAAGGATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCTGGGCACTGACTTCCTCCTAATATTAGAATGCATATAAGGATAG  550

seq1  GGAGGTATTGAGCTGCTTGTCATTTGAAGTGGTTTTCTCAAGTGGTGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTATTGAGCTGCTTGTCATTTGAAGTGGTTTTCTCAAGTGGTGATA  600

seq1  TCAGTGATGGTGTGGCGGTTTCCACAGAAATACATCCAAAGTAAATTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGATGGTGTGGCGGTTTCCACAGAAATACATCCAAAGTAAATTGAG  650

seq1  ACACTCCCTTTAGGTATGACACAAAGAGTAACTAAGAAAGTTCAAGACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCCCTTTAGGTATGACACAAAGAGTAACTAAGAAAGTTCAAGACAT  700

seq1  TTTGATTGCCAAAAGAAGTCATTGTTTTCCATGAACAGTAACACAGAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTGCCAAAAGAAGTCATTGTTTTCCATGAACAGTAACACAGAGCC  750

seq1  ATAATGCTAAGAAGAAGCAATTCCCAAGTGGCTTTTCAACTTTGTTGACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGCTAAGAAGAAGCAATTCCCAAGTGGCTTTTCAACTTTGTTGACT  800

seq1  CAGTGGAGAAAATGACATTCCAGGGACCCACCCTTAGCCTTTGGGGTTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAGAAAATGACATTCCAGGGACCCACCCTTAGCCTTTGGGGTTGA  850

seq1  ATAGTACTGGGCAGGACACAACATCAGAAGAAGACCAAAGACTGTTCATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTACTGGGCAGGACACAACATCAGAAGAAGACCAAAGACTGTTCATC  900

seq1  CCAGGCCTTATAATCTTACTATTTGTGTTTGAATAAGTGCTGGTTTCCTT  950
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCA-GCCTTATAATCTTACTATTTGTGTTTGAATAAGTGCTGGTTTCCTT  949

seq1  TCTCTTACTATGTTGTGCTTCAATTCATGATGGTTTCTTTTCTCTCTCTC  1000
      |||| ||||||| |||||||||||||||||||| ||||||||||||||||
seq2  TCTC-TACTATG-TGTGCTTCAATTCATGATGG-TTCTTTTCTCTCTCTC  996

seq1  CAGGACTTGTCAGGTGAAAGGAATGGAATTCATTTACTCTTTGTGAATCA  1050
      |||||| ||||| |||||||| |||  ||||| |||||||||||| ||||
seq2  CAGGAC-TGTCA-GTGAAAGG-ATG--ATTCA-TTACTCTTTGTG-ATCA  1039

seq1  GAAAGAAAAGAAAGGAAAAGAATTAAAATATTTTACACAGGAAATATGCA  1100
      | ||||||||||||| |||||    ||||| |||||||||  ||||||| 
seq2  G-AAGAAAAGAAAGGTAAAGA---TAAATA-TTTACACAG--AATATGCC  1082

seq1  CAGGCAA  1107
      |||||||
seq2  CAGGCAA  1089


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