BAC Information

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BAC

Clone NameB6Ng01-342E05
Chromosome12 (Build37)
Map Location 43,876,745 - 43,877,244
singlet/doubletsinglet
Overlap genenone
Upstream geneImmp2l, EG638533
Downstream geneLOC100039059
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-342E05.bB6Ng01-342E05.g
ACCGA125401GA125402
length752475
definitionB6Ng01-342E05.b B6Ng01-342E05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaatattaactcaaattttgccattttaatgaattctttttaa
ttcattttttttactttattagatattttctttatttacatttctttttt
atttttattttttaattgggtatttatttcatttacatttccaatgctat
cccaaaagtcccccccaccctcccccacccactcccccaccctcccactc
ccacttcttggccctggcattcccctgtactggggcatataaagtttgca
caaccaatgggcctccctttccactgatggccgactaggccatcttctga
ttcacatgcagctagagacacgagctctgggggagtattggttagttcat
attgttgttccacctatagaattgcagatcccttcagctccttgggtact
ttctctagctcctccattggggtccctgtgttccatccaagagctgactg
tgagcatccacttctgtgtttgccagaccccggcatagtctcacaagaga
ttgagtcctttcagcaaaatcttgctagtatatgcaatggtgtcagtgtt
tggaagctgattatgggatagatccccagatatggcagtctctagatggt
ccatccttttgtctcagctccaaaactttgtctctgtaatgccttccatg
ggtgttttgttcccaattctaagaaggggcaattacatgggaaaattgtt
ttctctatctatggtaatttgaaagtttggctggggataagtagcctggg
ct
ctgatctttccaacacttttaacatgaaagggtgttgtattttgtcaaag
gctttttttagcatctaataagatgattatgtgtttttttctctgtgagt
ttgttatgtagtggattatgtatactacagaggagtagtgatttagatat
agctgtctcttgtgagactacgccagggcgtagcaaacacataagtggat
gctcacagtcagctattagatggataacagggccctcaatagaggagctc
gagaaagtacccaaggagctaaagggatctgcaaccctataggtggaaca
acattatgaactaaccagtatccctgagctcttgactctagctgcatatg
tatcaaaagatggcctagttggccatcactggaaagagaggcccattgga
cttgcaaactttatatgcctcagtacaggggaatgccagggccaaaaagt
gggagtgggtaggtagaggagtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_43876745_43877244
seq2: B6Ng01-342E05.b_112_623

seq1  TTTATTAGATATTTTCTTTTTTT---TTCCTTTTCCATTTTT--------  39
      ||||||||||||||||||| |||   || |||||  ||||||        
seq2  TTTATTAGATATTTTCTTTATTTACATTTCTTTTTTATTTTTATTTTTTA  50

seq1  ATTAGGTATTTCGTTCATTTACATTTTCAATGCTATACCAAAAGTCCCCC  89
      ||| |||||||  ||||||||||||| ||||||||| |||||||||||||
seq2  ATTGGGTATTTATTTCATTTACATTTCCAATGCTATCCCAAAAGTCCCCC  100

seq1  ATTCCCACCCACCCCCGCTCCCCTAACCACCCACTCCCCCTTTTTGGCCC  139
         ||| ||| | ||| |||||| | || ||||||||| ||| |||||||
seq2  CCACCCTCCCCCACCCACTCCCCCACCCTCCCACTCCCACTTCTTGGCCC  150

seq1  TGGCATTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCT  189
      ||||||||||||||||||||||||||||||||||||   |||||||||||
seq2  TGGCATTCCCCTGTACTGGGGCATATAAAGTTTGCACAACCAATGGGCCT  200

seq1  CTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTA  239
      | ||||||| |||||||||||||||||||||| |||| || |||||||||
seq2  CCCTTTCCACTGATGGCCGACTAGGCCATCTTCTGATTCACATGCAGCTA  250

seq1  -------GAGCTCCGGG---GTACTGGTTAGTTCATAATGTTGTTCCACC  279
             |||||| |||   ||| ||||||||||||| ||||||||||||
seq2  GAGACACGAGCTCTGGGGGAGTATTGGTTAGTTCATATTGTTGTTCCACC  300

seq1  TATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTC  329
      |||||  ||||||||||||| |||||||||||||||||||||||||||||
seq2  TATAGAATTGCAGATCCCTTCAGCTCCTTGGGTACTTTCTCTAGCTCCTC  350

seq1  CATTGGGAGCCCTGTGATCCATCCATTAGCTGACTGTGAGCATCCACTTC  379
      |||||||  ||||||| ||||||||  |||||||||||||||||||||||
seq2  CATTGGGGTCCCTGTGTTCCATCCAAGAGCTGACTGTGAGCATCCACTTC  400

seq1  TGTGTTTACTAGGCCCCGGTATAGTCTCACAAGAGACAGCTACATCTGGG  429
      ||||||| | || |||||| ||||||||||||||||          || |
seq2  TGTGTTTGCCAGACCCCGGCATAGTCTCACAAGAGA---------TTGAG  441

seq1  TCCTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGTTTGGAT  479
      |||||||||||||||||||||||| |||||||||||||||| ||||||| 
seq2  TCCTTTCAGCAAAATCTTGCTAGTATATGCAATGGTGTCAGTGTTTGGAA  491

seq1  GCTGATTATGGGGTGGATCCC  500
      |||||||||||| | ||||||
seq2  GCTGATTATGGGATAGATCCC  512